RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
SMIM11A-203ENST00000399299 ARXQ96QS3 562 aa20.04■□□□□ 0.8
SMIM11A-203ENST00000399299 MAP3K5Q99683 1374 aa20.04■□□□□ 0.8
SMIM11A-203ENST00000399299 COL5A3P25940 1745 aaPredicted RBP20.03■□□□□ 0.8
SMIM11A-203ENST00000399299 CFAP53Q96M91 514 aa20.03■□□□□ 0.8
SMIM11A-203ENST00000399299 MRC1P22897 1456 aa20.03■□□□□ 0.8
SMIM11A-203ENST00000399299 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.8
SMIM11A-203ENST00000399299 POLD1P28340 1107 aa20.02■□□□□ 0.8
SMIM11A-203ENST00000399299 LINC00116Q8NCU8 138 aa20.02■□□□□ 0.8
SMIM11A-203ENST00000399299 AK7Q96M32 723 aa20.02■□□□□ 0.8
SMIM11A-203ENST00000399299 PPP2R1AP30153 589 aa20.01■□□□□ 0.79
SMIM11A-203ENST00000399299 ATP6V1AP38606 617 aa20.01■□□□□ 0.79
SMIM11A-203ENST00000399299 ITPK1Q13572 414 aa20.01■□□□□ 0.79
SMIM11A-203ENST00000399299 FHDC1Q9C0D6 1143 aaPredicted RBP20.01■□□□□ 0.79
SMIM11A-203ENST00000399299 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
SMIM11A-203ENST00000399299 SYT17Q9BSW7 474 aa20■□□□□ 0.79
SMIM11A-203ENST00000399299 MSH5O43196 834 aa19.99■□□□□ 0.79
SMIM11A-203ENST00000399299 SSFA2P28290 1259 aa19.99■□□□□ 0.79
SMIM11A-203ENST00000399299 MTHFSDQ2M296 383 aaKnown RBP19.99■□□□□ 0.79
SMIM11A-203ENST00000399299 NFATC2IPQ8NCF5 419 aa19.99■□□□□ 0.79
SMIM11A-203ENST00000399299 SLC4A9Q96Q91 983 aa19.98■□□□□ 0.79
SMIM11A-203ENST00000399299 DCAF8L1A6NGE4 600 aa19.97■□□□□ 0.79
SMIM11A-203ENST00000399299 SLC52A2Q9HAB3 445 aa19.97■□□□□ 0.79
SMIM11A-203ENST00000399299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.96■□□□□ 0.79
SMIM11A-203ENST00000399299 RNMTO43148 476 aaKnown RBP19.96■□□□□ 0.79
SMIM11A-203ENST00000399299 AMIGO3Q86WK7 504 aa19.96■□□□□ 0.79
SMIM11A-203ENST00000399299 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
SMIM11A-203ENST00000399299 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
SMIM11A-203ENST00000399299 TJP1Q07157 1748 aa19.96■□□□□ 0.79
SMIM11A-203ENST00000399299 GNPATO15228 680 aa19.95■□□□□ 0.78
SMIM11A-203ENST00000399299 RC3H1Q5TC82 1133 aaKnown RBP19.95■□□□□ 0.78
SMIM11A-203ENST00000399299 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
SMIM11A-203ENST00000399299 LGR6Q9HBX8 967 aa19.95■□□□□ 0.78
SMIM11A-203ENST00000399299 CNTNAP4Q9C0A0 1308 aa19.95■□□□□ 0.78
SMIM11A-203ENST00000399299 MYH14Q7Z406 1995 aaKnown RBP19.94■□□□□ 0.78
SMIM11A-203ENST00000399299 PHF14O94880 888 aa19.93■□□□□ 0.78
SMIM11A-203ENST00000399299 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
SMIM11A-203ENST00000399299 UBR2Q8IWV8 1755 aa19.93■□□□□ 0.78
SMIM11A-203ENST00000399299 PTCD1O75127 700 aaKnown RBP19.92■□□□□ 0.78
SMIM11A-203ENST00000399299 MSL1Q68DK7 614 aa19.92■□□□□ 0.78
SMIM11A-203ENST00000399299 SIPA1L3O60292 1781 aaPredicted RBP19.92■□□□□ 0.78
SMIM11A-203ENST00000399299 ADRA2BP18089 450 aa19.91■□□□□ 0.78
SMIM11A-203ENST00000399299 RTCBQ9Y3I0 505 aaKnown RBP19.91■□□□□ 0.78
SMIM11A-203ENST00000399299 KCPQ6ZWJ8 1503 aa19.91■□□□□ 0.78
SMIM11A-203ENST00000399299 GNAT3A8MTJ3 354 aa19.9■□□□□ 0.78
SMIM11A-203ENST00000399299 PRKAR2BP31323 418 aa19.9■□□□□ 0.78
SMIM11A-203ENST00000399299 SMIM5Q71RC9 77 aa19.9■□□□□ 0.78
SMIM11A-203ENST00000399299 C4AP0C0L4 1744 aa19.9■□□□□ 0.78
SMIM11A-203ENST00000399299 FCHSD2O94868 740 aa19.89■□□□□ 0.77
SMIM11A-203ENST00000399299 U2AF1L5P0DN76 240 aaPredicted RBP19.89■□□□□ 0.77
SMIM11A-203ENST00000399299 U2AF1Q01081 240 aaKnown RBP eCLIP19.89■□□□□ 0.77
SMIM11A-203ENST00000399299 RPS6KA4O75676 772 aa19.88■□□□□ 0.77
SMIM11A-203ENST00000399299 PHACTR3Q96KR7 559 aa19.88■□□□□ 0.77
SMIM11A-203ENST00000399299 CEMIPQ8WUJ3 1361 aa19.87■□□□□ 0.77
SMIM11A-203ENST00000399299 TRAPPC3LQ5T215 181 aa19.87■□□□□ 0.77
SMIM11A-203ENST00000399299 KLHL34Q8N239 644 aa19.87■□□□□ 0.77
SMIM11A-203ENST00000399299 IL17REQ8NFR9 667 aa19.87■□□□□ 0.77
SMIM11A-203ENST00000399299 CRKLP46109 303 aaKnown RBP19.86■□□□□ 0.77
SMIM11A-203ENST00000399299 TEFQ10587 303 aa19.85■□□□□ 0.77
SMIM11A-203ENST00000399299 SLC39A6Q13433 755 aa19.85■□□□□ 0.77
SMIM11A-203ENST00000399299 RALBP1Q15311 655 aa19.85■□□□□ 0.77
SMIM11A-203ENST00000399299 VSIG10Q8N0Z9 540 aa19.85■□□□□ 0.77
SMIM11A-203ENST00000399299 CD2APQ9Y5K6 639 aa19.85■□□□□ 0.77
SMIM11A-203ENST00000399299 ARHGEF1Q92888 912 aaKnown RBP19.84■□□□□ 0.77
SMIM11A-203ENST00000399299 CHD4Q14839 1912 aa19.84■□□□□ 0.77
SMIM11A-203ENST00000399299 UTRNP46939 3433 aa19.83■□□□□ 0.77
SMIM11A-203ENST00000399299 DDX10Q13206 875 aaKnown RBP19.83■□□□□ 0.77
SMIM11A-203ENST00000399299 DNAJC10Q8IXB1 793 aa19.83■□□□□ 0.77
SMIM11A-203ENST00000399299 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
SMIM11A-203ENST00000399299 RFC4P35249 363 aa19.82■□□□□ 0.76
SMIM11A-203ENST00000399299 INTS5Q6P9B9 1019 aaKnown RBP19.82■□□□□ 0.76
SMIM11A-203ENST00000399299 TTC5Q8N0Z6 440 aa19.82■□□□□ 0.76
SMIM11A-203ENST00000399299 NLGN1Q8N2Q7 840 aa19.82■□□□□ 0.76
SMIM11A-203ENST00000399299 CCDC87Q9NVE4 849 aa19.82■□□□□ 0.76
SMIM11A-203ENST00000399299 CYP19A1P11511 503 aaPredicted RBP19.81■□□□□ 0.76
SMIM11A-203ENST00000399299 YY1P25490 414 aa19.81■□□□□ 0.76
SMIM11A-203ENST00000399299 ZNF790Q6PG37 636 aa19.81■□□□□ 0.76
SMIM11A-203ENST00000399299 KIF13BQ9NQT8 1826 aa19.81■□□□□ 0.76
SMIM11A-203ENST00000399299 GOLGB1Q14789 3259 aaKnown RBP19.8■□□□□ 0.76
SMIM11A-203ENST00000399299 HTATSF1O43719 755 aaKnown RBP19.8■□□□□ 0.76
SMIM11A-203ENST00000399299 GYS1P13807 737 aa19.8■□□□□ 0.76
SMIM11A-203ENST00000399299 DLG5Q8TDM6 1919 aa19.8■□□□□ 0.76
SMIM11A-203ENST00000399299 HEG1Q9ULI3 1381 aa19.79■□□□□ 0.76
SMIM11A-203ENST00000399299 SOS1Q07889 1333 aaPredicted RBP19.78■□□□□ 0.76
SMIM11A-203ENST00000399299 NEFMP07197 916 aa19.78■□□□□ 0.76
SMIM11A-203ENST00000399299 MMP10P09238 476 aa19.78■□□□□ 0.76
SMIM11A-203ENST00000399299 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
SMIM11A-203ENST00000399299 GPR162Q16538 588 aa19.78■□□□□ 0.76
SMIM11A-203ENST00000399299 RTF1Q92541 710 aaKnown RBP19.78■□□□□ 0.76
SMIM11A-203ENST00000399299 USP42Q9H9J4 1324 aaKnown RBP19.77■□□□□ 0.76
SMIM11A-203ENST00000399299 ZNF496Q96IT1 587 aaPredicted RBP19.77■□□□□ 0.76
SMIM11A-203ENST00000399299 STARD3NLO95772 234 aa19.76■□□□□ 0.75
SMIM11A-203ENST00000399299 PLEKHF1Q96S99 279 aa19.76■□□□□ 0.75
SMIM11A-203ENST00000399299 TEX13AQ9BXU3 409 aaPredicted RBP19.76■□□□□ 0.75
SMIM11A-203ENST00000399299 PNNQ9H307 717 aaKnown RBP19.76■□□□□ 0.75
SMIM11A-203ENST00000399299 MYBBP1AQ9BQG0 1328 aaKnown RBP19.76■□□□□ 0.75
SMIM11A-203ENST00000399299 COL15A1P39059 1388 aa19.75■□□□□ 0.75
SMIM11A-203ENST00000399299 BTBD11A6QL63 1104 aa19.75■□□□□ 0.75
SMIM11A-203ENST00000399299 MCM10Q7L590 875 aa19.75■□□□□ 0.75
SMIM11A-203ENST00000399299 FMNL2Q96PY5 1086 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms