RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 TSPYL6Q8N831 410 aa21.52■■□□□ 1.04
CDH23-204ENST00000398792 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
CDH23-204ENST00000398792 BTBD11A6QL63 1104 aa21.51■■□□□ 1.03
CDH23-204ENST00000398792 TWISTNBQ3B726 338 aaPredicted RBP21.51■■□□□ 1.03
CDH23-204ENST00000398792 TRPC5Q9UL62 973 aaPredicted RBP21.51■■□□□ 1.03
CDH23-204ENST00000398792 PAPPAQ13219 1627 aa21.51■■□□□ 1.03
CDH23-204ENST00000398792 KRT24Q2M2I5 525 aa21.51■■□□□ 1.03
CDH23-204ENST00000398792 DOT1LQ8TEK3 1739 aa21.5■■□□□ 1.03
CDH23-204ENST00000398792 ZNF428Q96B54 188 aa21.5■■□□□ 1.03
CDH23-204ENST00000398792 GJD4Q96KN9 370 aaPredicted RBP21.5■■□□□ 1.03
CDH23-204ENST00000398792 ERVV-2B6SEH9 535 aa21.49■■□□□ 1.03
CDH23-204ENST00000398792 VAMP4O75379 141 aa21.49■■□□□ 1.03
CDH23-204ENST00000398792 BCAR3O75815 825 aa21.49■■□□□ 1.03
CDH23-204ENST00000398792 NEFLP07196 543 aa21.49■■□□□ 1.03
CDH23-204ENST00000398792 CABP4P57796 275 aa21.48■■□□□ 1.03
CDH23-204ENST00000398792 NFATC2IPQ8NCF5 419 aa21.48■■□□□ 1.03
CDH23-204ENST00000398792 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
CDH23-204ENST00000398792 ELL2O00472 640 aaPredicted RBP21.47■■□□□ 1.03
CDH23-204ENST00000398792 ITGB4P16144 1822 aa21.46■■□□□ 1.03
CDH23-204ENST00000398792 KCNQ3O43525 872 aa21.46■■□□□ 1.03
CDH23-204ENST00000398792 EIF4A1P60842 406 aaKnown RBP21.46■■□□□ 1.03
CDH23-204ENST00000398792 ALDH1L2Q3SY69 923 aa21.46■■□□□ 1.03
CDH23-204ENST00000398792 SSH1Q8WYL5 1049 aa21.46■■□□□ 1.03
CDH23-204ENST00000398792 BCL2L13Q9BXK5 485 aa21.46■■□□□ 1.03
CDH23-204ENST00000398792 SOS1Q07889 1333 aaPredicted RBP21.46■■□□□ 1.03
CDH23-204ENST00000398792 UBR2Q8IWV8 1755 aa21.46■■□□□ 1.03
CDH23-204ENST00000398792 SMC4Q9NTJ3 1288 aa21.45■■□□□ 1.02
CDH23-204ENST00000398792 MARCH10Q8NA82 808 aaPredicted RBP21.44■■□□□ 1.02
CDH23-204ENST00000398792 QTRT2Q9H974 415 aaKnown RBP21.44■■□□□ 1.02
CDH23-204ENST00000398792 ZNF790Q6PG37 636 aa21.44■■□□□ 1.02
CDH23-204ENST00000398792 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.44■■□□□ 1.02
CDH23-204ENST00000398792 HEG1Q9ULI3 1381 aa21.43■■□□□ 1.02
CDH23-204ENST00000398792 A0A0G2JS52 829 aa21.43■■□□□ 1.02
CDH23-204ENST00000398792 PLIN1O60240 522 aa21.43■■□□□ 1.02
CDH23-204ENST00000398792 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
CDH23-204ENST00000398792 MYT1Q01538 1121 aa21.43■■□□□ 1.02
CDH23-204ENST00000398792 C5P01031 1676 aa21.42■■□□□ 1.02
CDH23-204ENST00000398792 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
CDH23-204ENST00000398792 FKBP8Q14318 412 aa21.42■■□□□ 1.02
CDH23-204ENST00000398792 ZNF772Q68DY9 489 aaPredicted RBP21.42■■□□□ 1.02
CDH23-204ENST00000398792 TMOD3Q9NYL9 352 aa21.42■■□□□ 1.02
CDH23-204ENST00000398792 ONECUT3O60422 494 aaPredicted RBP21.41■■□□□ 1.02
CDH23-204ENST00000398792 HOXB7P09629 217 aa21.41■■□□□ 1.02
CDH23-204ENST00000398792 KCPQ6ZWJ8 1503 aa21.41■■□□□ 1.02
CDH23-204ENST00000398792 BCL9O00512 1426 aa21.4■■□□□ 1.02
CDH23-204ENST00000398792 KIF16BQ96L93 1317 aa21.4■■□□□ 1.02
CDH23-204ENST00000398792 BRPF1P55201 1214 aaPredicted RBP21.4■■□□□ 1.02
CDH23-204ENST00000398792 TTC5Q8N0Z6 440 aa21.4■■□□□ 1.02
CDH23-204ENST00000398792 LAMB4A4D0S4 1761 aa21.39■■□□□ 1.01
CDH23-204ENST00000398792 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
CDH23-204ENST00000398792 MRPL50Q8N5N7 158 aaKnown RBP21.38■■□□□ 1.01
CDH23-204ENST00000398792 FRAT1Q92837 279 aaPredicted RBP21.38■■□□□ 1.01
CDH23-204ENST00000398792 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
CDH23-204ENST00000398792 GIGYF1O75420 1035 aaPredicted RBP21.37■■□□□ 1.01
CDH23-204ENST00000398792 SEPT12Q8IYM1 358 aa21.37■■□□□ 1.01
CDH23-204ENST00000398792 PIGBQ92521 554 aa21.37■■□□□ 1.01
CDH23-204ENST00000398792 ZNF496Q96IT1 587 aaPredicted RBP21.37■■□□□ 1.01
CDH23-204ENST00000398792 HDGFL1Q5TGJ6 251 aa21.36■■□□□ 1.01
CDH23-204ENST00000398792 FMNL2Q96PY5 1086 aa21.36■■□□□ 1.01
CDH23-204ENST00000398792 NHSQ6T4R5 1651 aa21.35■■□□□ 1.01
CDH23-204ENST00000398792 C20orf194Q5TEA3 1177 aa21.35■■□□□ 1.01
CDH23-204ENST00000398792 CCDC30Q5VVM6 783 aa21.35■■□□□ 1.01
CDH23-204ENST00000398792 ZKSCAN2Q63HK3 967 aa21.34■■□□□ 1.01
CDH23-204ENST00000398792 SYTL4Q96C24 671 aaPredicted RBP21.34■■□□□ 1.01
CDH23-204ENST00000398792 PRIM1P49642 420 aaKnown RBP21.33■■□□□ 1.01
CDH23-204ENST00000398792 RBM6P78332 1123 aaKnown RBP21.33■■□□□ 1.01
CDH23-204ENST00000398792 NOB1Q9ULX3 412 aaKnown RBP21.33■■□□□ 1.01
CDH23-204ENST00000398792 BRWD3Q6RI45 1802 aa21.33■■□□□ 1
CDH23-204ENST00000398792 PRAMEF22A3QJZ6 481 aa21.33■■□□□ 1
CDH23-204ENST00000398792 PDE3AQ14432 1141 aa21.33■■□□□ 1
CDH23-204ENST00000398792 ACSBG1Q96GR2 724 aa21.33■■□□□ 1
CDH23-204ENST00000398792 STK31Q9BXU1 1019 aa21.33■■□□□ 1
CDH23-204ENST00000398792 CHMP4AQ9BY43 222 aa21.33■■□□□ 1
CDH23-204ENST00000398792 ATF7IPQ6VMQ6 1270 aa21.32■■□□□ 1
CDH23-204ENST00000398792 NECTIN2Q92692 538 aa21.32■■□□□ 1
CDH23-204ENST00000398792 ATG3Q9NT62 314 aa21.32■■□□□ 1
CDH23-204ENST00000398792 CACNA1FO60840 1977 aa21.31■■□□□ 1
CDH23-204ENST00000398792 IPO8O15397 1037 aaKnown RBP21.31■■□□□ 1
CDH23-204ENST00000398792 SNRPA1P09661 255 aaKnown RBP21.31■■□□□ 1
CDH23-204ENST00000398792 TRIM27P14373 513 aa21.31■■□□□ 1
CDH23-204ENST00000398792 ERICH6BQ5W0A0 696 aa21.31■■□□□ 1
CDH23-204ENST00000398792 ASAP1Q9ULH1 1129 aa21.31■■□□□ 1
CDH23-204ENST00000398792 TNNQ9UQP3 1299 aa21.31■■□□□ 1
CDH23-204ENST00000398792 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
CDH23-204ENST00000398792 SLC4A2P04920 1241 aa21.29■■□□□ 1
CDH23-204ENST00000398792 ARHGAP45Q92619 1136 aa21.29■■□□□ 1
CDH23-204ENST00000398792 RGS12O14924 1447 aa21.29■■□□□ 1
CDH23-204ENST00000398792 CRBNQ96SW2 442 aa21.29■■□□□ 1
CDH23-204ENST00000398792 RGS17Q9UGC6 210 aaPredicted RBP21.29■■□□□ 1
CDH23-204ENST00000398792 SBF2Q86WG5 1849 aa21.28■■□□□ 1
CDH23-204ENST00000398792 CICQ96RK0 1608 aaPredicted RBP21.28■■□□□ 1
CDH23-204ENST00000398792 PTCD1O75127 700 aaKnown RBP21.28■■□□□ 1
CDH23-204ENST00000398792 RLBP1P12271 317 aa21.28■■□□□ 1
CDH23-204ENST00000398792 PANK1Q8TE04 598 aa21.28■■□□□ 1
CDH23-204ENST00000398792 CHPF2Q9P2E5 772 aa21.28■■□□□ 1
CDH23-204ENST00000398792 PTPRCP08575 1304 aa21.28■■□□□ 1
CDH23-204ENST00000398792 TJP1Q07157 1748 aa21.27■■□□□ 1
CDH23-204ENST00000398792 MS4A1P11836 297 aa21.27■■□□□ 1
CDH23-204ENST00000398792 FTSJ3Q8IY81 847 aaKnown RBP21.27■■□□□ 1
CDH23-204ENST00000398792 DZIP1LQ8IYY4 767 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms