RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 DMTNQ08495 405 aa12.52□□□□□ -0.41
HMGCLL1-205ENST00000398661 KRT24Q2M2I5 525 aa12.52□□□□□ -0.41
HMGCLL1-205ENST00000398661 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
HMGCLL1-205ENST00000398661 PRDM11Q9NQV5 511 aa12.52□□□□□ -0.41
HMGCLL1-205ENST00000398661 MED1Q15648 1581 aaPredicted RBP12.52□□□□□ -0.41
HMGCLL1-205ENST00000398661 LTBP4Q8N2S1 1624 aa12.52□□□□□ -0.41
HMGCLL1-205ENST00000398661 HSP90AB1P08238 724 aaKnown RBP12.51□□□□□ -0.41
HMGCLL1-205ENST00000398661 RLBP1P12271 317 aa12.51□□□□□ -0.41
HMGCLL1-205ENST00000398661 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
HMGCLL1-205ENST00000398661 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
HMGCLL1-205ENST00000398661 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
HMGCLL1-205ENST00000398661 TNNQ9UQP3 1299 aa12.5□□□□□ -0.41
HMGCLL1-205ENST00000398661 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
HMGCLL1-205ENST00000398661 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
HMGCLL1-205ENST00000398661 TNS3Q68CZ2 1445 aa12.5□□□□□ -0.41
HMGCLL1-205ENST00000398661 RBM25P49756 843 aaKnown RBP12.49□□□□□ -0.41
HMGCLL1-205ENST00000398661 KLHL40Q2TBA0 621 aa12.49□□□□□ -0.41
HMGCLL1-205ENST00000398661 NFAT5O94916 1531 aa12.49□□□□□ -0.41
HMGCLL1-205ENST00000398661 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
HMGCLL1-205ENST00000398661 CCDC94Q9BW85 323 aaPredicted RBP12.49□□□□□ -0.41
HMGCLL1-205ENST00000398661 LTN1O94822 1766 aa12.48□□□□□ -0.41
HMGCLL1-205ENST00000398661 GOLGA6L22H0YM25 854 aa12.48□□□□□ -0.41
HMGCLL1-205ENST00000398661 UTRNP46939 3433 aa12.48□□□□□ -0.41
HMGCLL1-205ENST00000398661 NFE2L2Q16236 605 aa12.48□□□□□ -0.41
HMGCLL1-205ENST00000398661 SASS6Q6UVJ0 657 aa12.48□□□□□ -0.41
HMGCLL1-205ENST00000398661 DDX49Q9Y6V7 483 aaKnown RBP12.48□□□□□ -0.41
HMGCLL1-205ENST00000398661 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
HMGCLL1-205ENST00000398661 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 RGPD5Q99666 1765 aa12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 ZNF445P59923 1031 aa12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 PDLIM2Q96JY6 352 aa12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 IGSF1Q8N6C5 1336 aa12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 PDE4CQ08493 712 aa12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 TSPYL6Q8N831 410 aa12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 ZKSCAN5Q9Y2L8 839 aa12.47□□□□□ -0.41
HMGCLL1-205ENST00000398661 ERBB3P21860 1342 aa12.46□□□□□ -0.41
HMGCLL1-205ENST00000398661 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
HMGCLL1-205ENST00000398661 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
HMGCLL1-205ENST00000398661 ROBO1Q9Y6N7 1651 aa12.46□□□□□ -0.41
HMGCLL1-205ENST00000398661 SSFA2P28290 1259 aa12.46□□□□□ -0.42
HMGCLL1-205ENST00000398661 MPRIPQ6WCQ1 1025 aa12.46□□□□□ -0.42
HMGCLL1-205ENST00000398661 CLEC17AQ6ZS10 378 aa12.46□□□□□ -0.42
HMGCLL1-205ENST00000398661 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.42
HMGCLL1-205ENST00000398661 LGR6Q9HBX8 967 aa12.46□□□□□ -0.42
HMGCLL1-205ENST00000398661 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.42
HMGCLL1-205ENST00000398661 TOM1O60784 492 aa12.45□□□□□ -0.42
HMGCLL1-205ENST00000398661 MCM5P33992 734 aa12.45□□□□□ -0.42
HMGCLL1-205ENST00000398661 BTG4Q9NY30 223 aa12.45□□□□□ -0.42
HMGCLL1-205ENST00000398661 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
HMGCLL1-205ENST00000398661 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
HMGCLL1-205ENST00000398661 TOM1L2Q6ZVM7 507 aa12.44□□□□□ -0.42
HMGCLL1-205ENST00000398661 RBSNQ9H1K0 784 aa12.44□□□□□ -0.42
HMGCLL1-205ENST00000398661 ALS2Q96Q42 1657 aa12.44□□□□□ -0.42
HMGCLL1-205ENST00000398661 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
HMGCLL1-205ENST00000398661 MVPQ14764 893 aaKnown RBP12.44□□□□□ -0.42
HMGCLL1-205ENST00000398661 KIF1AQ12756 1690 aa12.43□□□□□ -0.42
HMGCLL1-205ENST00000398661 KAT6BQ8WYB5 2073 aa12.43□□□□□ -0.42
HMGCLL1-205ENST00000398661 ZSCAN23Q3MJ62 389 aa12.43□□□□□ -0.42
HMGCLL1-205ENST00000398661 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
HMGCLL1-205ENST00000398661 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
HMGCLL1-205ENST00000398661 EVA1CP58658 441 aa12.42□□□□□ -0.42
HMGCLL1-205ENST00000398661 IL17REQ8NFR9 667 aa12.42□□□□□ -0.42
HMGCLL1-205ENST00000398661 BBXQ8WY36 941 aaPredicted RBP12.42□□□□□ -0.42
HMGCLL1-205ENST00000398661 GTPBP4Q9BZE4 634 aaKnown RBP12.42□□□□□ -0.42
HMGCLL1-205ENST00000398661 ARHGEF10O15013 1369 aa12.42□□□□□ -0.42
HMGCLL1-205ENST00000398661 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
HMGCLL1-205ENST00000398661 KIF2CQ99661 725 aa12.42□□□□□ -0.42
HMGCLL1-205ENST00000398661 CD2BP2O95400 341 aaKnown RBP12.41□□□□□ -0.42
HMGCLL1-205ENST00000398661 HDAC1Q13547 482 aaPredicted RBP12.41□□□□□ -0.42
HMGCLL1-205ENST00000398661 CAVIN1Q6NZI2 390 aaKnown RBP12.41□□□□□ -0.42
HMGCLL1-205ENST00000398661 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
HMGCLL1-205ENST00000398661 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
HMGCLL1-205ENST00000398661 KCNQ3O43525 872 aa12.41□□□□□ -0.42
HMGCLL1-205ENST00000398661 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
HMGCLL1-205ENST00000398661 ZNF428Q96B54 188 aa12.41□□□□□ -0.42
HMGCLL1-205ENST00000398661 CAMTA1Q9Y6Y1 1673 aa12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 SLIT3O75094 1523 aa12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 GAS2L2Q8NHY3 880 aa12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 KDRP35968 1356 aa12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 KIF20AO95235 890 aa12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 HSPA1LP34931 641 aa12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 WDR63Q8IWG1 891 aa12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 DDX54Q8TDD1 881 aaKnown RBP12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
HMGCLL1-205ENST00000398661 DLG5Q8TDM6 1919 aa12.39□□□□□ -0.43
HMGCLL1-205ENST00000398661 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
HMGCLL1-205ENST00000398661 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
HMGCLL1-205ENST00000398661 MYRIPQ8NFW9 859 aa12.39□□□□□ -0.43
HMGCLL1-205ENST00000398661 C8orf37Q96NL8 207 aa12.39□□□□□ -0.43
HMGCLL1-205ENST00000398661 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
HMGCLL1-205ENST00000398661 MCTP1Q6DN14 999 aa12.39□□□□□ -0.43
HMGCLL1-205ENST00000398661 DZIP1LQ8IYY4 767 aaKnown RBP12.39□□□□□ -0.43
HMGCLL1-205ENST00000398661 ZKSCAN2Q63HK3 967 aa12.38□□□□□ -0.43
HMGCLL1-205ENST00000398661 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
HMGCLL1-205ENST00000398661 RAPGEF4Q8WZA2 1011 aa12.38□□□□□ -0.43
HMGCLL1-205ENST00000398661 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
HMGCLL1-205ENST00000398661 A0A0G2JS52 829 aa12.38□□□□□ -0.43
HMGCLL1-205ENST00000398661 GNAT3A8MTJ3 354 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms