RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 MAP2K1Q02750 393 aaPredicted RBP13.76□□□□□ -0.21
TMF1-201ENST00000398559 KIF4BQ2VIQ3 1234 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 TRMT1Q9NXH9 659 aaKnown RBP13.76□□□□□ -0.21
TMF1-201ENST00000398559 USP25Q9UHP3 1055 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 MIS18AQ9NYP9 233 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
TMF1-201ENST00000398559 DYDC1Q8WWB3 177 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 KIF1BPQ96EK5 621 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 CCDC113Q9H0I3 377 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 RTEL1-TNFRSF6BF6WH68 1400 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 LRP2BPQ9P2M1 347 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 EHBP1L1Q8N3D4 1523 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 NSD3Q9BZ95 1437 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 ZNF76P36508 570 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 TBC1D2Q9BYX2 928 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 IBSPP21815 317 aaPredicted RBP13.75□□□□□ -0.21
TMF1-201ENST00000398559 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 SCAND2PQ9GZW5 306 aaPredicted RBP13.75□□□□□ -0.21
TMF1-201ENST00000398559 USP5P45974 858 aa13.75□□□□□ -0.21
TMF1-201ENST00000398559 RBM5P52756 815 aaKnown RBP eCLIP13.74□□□□□ -0.21
TMF1-201ENST00000398559 GUCY1B3Q02153 619 aa13.74□□□□□ -0.21
TMF1-201ENST00000398559 CCDC85AQ96PX6 553 aaPredicted RBP13.74□□□□□ -0.21
TMF1-201ENST00000398559 RAB11FIP3O75154 756 aa13.74□□□□□ -0.21
TMF1-201ENST00000398559 CKAP2LQ8IYA6 745 aa13.74□□□□□ -0.21
TMF1-201ENST00000398559 C16orf45Q96MC5 204 aaPredicted RBP13.74□□□□□ -0.21
TMF1-201ENST00000398559 PLEKHH1Q9ULM0 1364 aa13.74□□□□□ -0.21
TMF1-201ENST00000398559 SLC26A8Q96RN1 970 aa13.74□□□□□ -0.21
TMF1-201ENST00000398559 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
TMF1-201ENST00000398559 TOM1L2Q6ZVM7 507 aa13.74□□□□□ -0.21
TMF1-201ENST00000398559 GLRX3O76003 335 aaKnown RBP13.73□□□□□ -0.21
TMF1-201ENST00000398559 NKTRP30414 1462 aaKnown RBP13.73□□□□□ -0.21
TMF1-201ENST00000398559 MCM3P25205 808 aa13.73□□□□□ -0.21
TMF1-201ENST00000398559 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
TMF1-201ENST00000398559 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
TMF1-201ENST00000398559 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
TMF1-201ENST00000398559 FKBP15Q5T1M5 1219 aa13.73□□□□□ -0.21
TMF1-201ENST00000398559 BOLA2Q9H3K6 86 aa13.73□□□□□ -0.21
TMF1-201ENST00000398559 TRERF1Q96PN7 1200 aa13.73□□□□□ -0.21
TMF1-201ENST00000398559 GOLGA6L10A0A0M3HER8 536 aa13.72□□□□□ -0.21
TMF1-201ENST00000398559 CCDC178Q5BJE1 867 aa13.72□□□□□ -0.21
TMF1-201ENST00000398559 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
TMF1-201ENST00000398559 GNAT3A8MTJ3 354 aa13.72□□□□□ -0.21
TMF1-201ENST00000398559 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
TMF1-201ENST00000398559 C8orf76Q96K31 380 aa13.72□□□□□ -0.21
TMF1-201ENST00000398559 PPP4R3BQ5MIZ7 849 aa13.72□□□□□ -0.21
TMF1-201ENST00000398559 GOPCQ9HD26 462 aa13.72□□□□□ -0.21
TMF1-201ENST00000398559 BCCIPQ9P287 314 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMF1-201ENST00000398559 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.218e-7■■■■■ 28.2
TMF1-201ENST00000398559 CACNA2D4Q7Z3S7 1137 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 CCDC91Q7Z6B0 441 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 CALCOCO1Q9P1Z2 691 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 CPLX3Q8WVH0 158 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 NUP88Q99567 741 aaPredicted RBP13.71□□□□□ -0.21
TMF1-201ENST00000398559 LARP6Q9BRS8 491 aaKnown RBP13.71□□□□□ -0.21
TMF1-201ENST00000398559 DNA2P51530 1060 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 MCM10Q7L590 875 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 CTAGE5O15320 804 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 ADCY5O95622 1261 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 LUZP1Q86V48 1076 aa13.71□□□□□ -0.21
TMF1-201ENST00000398559 ZSCAN29Q8IWY8 852 aaPredicted RBP13.71□□□□□ -0.21
TMF1-201ENST00000398559 RNF187Q5TA31 235 aaPredicted RBP13.71□□□□□ -0.22
TMF1-201ENST00000398559 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.22
TMF1-201ENST00000398559 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.22
TMF1-201ENST00000398559 IFFO1Q0D2I5 559 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 TSG101Q99816 390 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 DESP17661 470 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
TMF1-201ENST00000398559 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
TMF1-201ENST00000398559 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 METTL24Q5JXM2 366 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 PPP1R12BO60237 982 aaPredicted RBP13.7□□□□□ -0.22
TMF1-201ENST00000398559 TMC6Q7Z403 805 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
TMF1-201ENST00000398559 PLEKHH2Q8IVE3 1493 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
TMF1-201ENST00000398559 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMF1-201ENST00000398559 ABCF2Q9UG63 623 aa13.69□□□□□ -0.22
TMF1-201ENST00000398559 ATAD2Q6PL18 1390 aa13.69□□□□□ -0.22
TMF1-201ENST00000398559 MINDY4BA8MYZ0 360 aa13.69□□□□□ -0.22
TMF1-201ENST00000398559 IGHMBP2P38935 993 aaKnown RBP13.69□□□□□ -0.22
TMF1-201ENST00000398559 FSIP1Q8NA03 581 aa13.69□□□□□ -0.22
TMF1-201ENST00000398559 CNNM3Q8NE01 707 aa13.69□□□□□ -0.22
TMF1-201ENST00000398559 NEBLO76041 1014 aa13.69□□□□□ -0.22
TMF1-201ENST00000398559 POTEJP0CG39 1038 aa13.69□□□□□ -0.22
TMF1-201ENST00000398559 TICAM2Q86XR7 235 aa13.69□□□□□ -0.22
TMF1-201ENST00000398559 SEC63Q9UGP8 760 aaKnown RBP13.69□□□□□ -0.22
TMF1-201ENST00000398559 SUPT6HQ7KZ85 1726 aaKnown RBP13.69□□□□□ -0.22
TMF1-201ENST00000398559 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
TMF1-201ENST00000398559 NEMFO60524 1076 aa13.68□□□□□ -0.22
TMF1-201ENST00000398559 GJB2P29033 226 aa13.68□□□□□ -0.22
TMF1-201ENST00000398559 IFIT1P09914 478 aaKnown RBP13.68□□□□□ -0.22
TMF1-201ENST00000398559 CETN2P41208 172 aa13.68□□□□□ -0.22
TMF1-201ENST00000398559 DDX19AQ9NUU7 478 aaKnown RBP13.68□□□□□ -0.22
TMF1-201ENST00000398559 AKAP2Q9Y2D5 859 aa13.68□□□□□ -0.22
TMF1-201ENST00000398559 USO1O60763 962 aaKnown RBP13.67□□□□□ -0.22
TMF1-201ENST00000398559 PAFAH1B1P43034 410 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 GSDMDP57764 484 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms