RNA–Protein interactions for RNA: ENST00000398361.7

GPM6B-204, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-204ENST00000398361 PRKRIP1Q9H875 184 aaPredicted RBP25.55■■□□□ 1.68
GPM6B-204ENST00000398361 MSH5O43196 834 aa25.54■■□□□ 1.68
GPM6B-204ENST00000398361 U2AF1L5P0DN76 240 aaPredicted RBP25.54■■□□□ 1.68
GPM6B-204ENST00000398361 U2AF1Q01081 240 aaKnown RBP eCLIP25.54■■□□□ 1.68
GPM6B-204ENST00000398361 DCAF5Q96JK2 942 aa25.54■■□□□ 1.68
GPM6B-204ENST00000398361 TMOD3Q9NYL9 352 aa25.54■■□□□ 1.68
GPM6B-204ENST00000398361 UBR3Q6ZT12 1888 aa25.52■■□□□ 1.68
GPM6B-204ENST00000398361 COL23A1Q86Y22 540 aaPredicted RBP25.52■■□□□ 1.68
GPM6B-204ENST00000398361 RSPH6AQ9H0K4 717 aa25.52■■□□□ 1.68
GPM6B-204ENST00000398361 CHD4Q14839 1912 aa25.52■■□□□ 1.68
GPM6B-204ENST00000398361 MTHFSDQ2M296 383 aaKnown RBP25.51■■□□□ 1.67
GPM6B-204ENST00000398361 AKAP4Q5JQC9 854 aa25.51■■□□□ 1.67
GPM6B-204ENST00000398361 KDM6AO15550 1401 aaPredicted RBP25.51■■□□□ 1.67
GPM6B-204ENST00000398361 ERVV-2B6SEH9 535 aa25.5■■□□□ 1.67
GPM6B-204ENST00000398361 FCHSD2O94868 740 aa25.5■■□□□ 1.67
GPM6B-204ENST00000398361 PRKAR2BP31323 418 aa25.5■■□□□ 1.67
GPM6B-204ENST00000398361 SCN11AQ9UI33 1791 aa25.5■■□□□ 1.67
GPM6B-204ENST00000398361 VIRMAQ69YN4 1812 aaKnown RBP25.49■■□□□ 1.67
GPM6B-204ENST00000398361 KLHL34Q8N239 644 aa25.49■■□□□ 1.67
GPM6B-204ENST00000398361 FLAD1Q8NFF5 587 aa25.49■■□□□ 1.67
GPM6B-204ENST00000398361 AK7Q96M32 723 aa25.48■■□□□ 1.67
GPM6B-204ENST00000398361 LOC102724428A0A0B4J2F2 783 aa25.46■■□□□ 1.67
GPM6B-204ENST00000398361 SIK1P57059 783 aa25.46■■□□□ 1.67
GPM6B-204ENST00000398361 GAS2L2Q8NHY3 880 aa25.46■■□□□ 1.67
GPM6B-204ENST00000398361 ASAP1Q9ULH1 1129 aa25.46■■□□□ 1.67
GPM6B-204ENST00000398361 PHACTR3Q96KR7 559 aa25.45■■□□□ 1.66
GPM6B-204ENST00000398361 CABP4P57796 275 aa25.44■■□□□ 1.66
GPM6B-204ENST00000398361 ADAMTS7Q9UKP4 1686 aa25.44■■□□□ 1.66
GPM6B-204ENST00000398361 MSL1Q68DK7 614 aa25.43■■□□□ 1.66
GPM6B-204ENST00000398361 ZNF831Q5JPB2 1677 aa25.42■■□□□ 1.66
GPM6B-204ENST00000398361 ATG3Q9NT62 314 aa25.42■■□□□ 1.66
GPM6B-204ENST00000398361 RNMTO43148 476 aaKnown RBP25.41■■□□□ 1.66
GPM6B-204ENST00000398361 ATP6V1AP38606 617 aa25.41■■□□□ 1.66
GPM6B-204ENST00000398361 LINC00116Q8NCU8 138 aa25.41■■□□□ 1.66
GPM6B-204ENST00000398361 LGR6Q9HBX8 967 aa25.41■■□□□ 1.66
GPM6B-204ENST00000398361 GNAT3A8MTJ3 354 aa25.4■■□□□ 1.66
GPM6B-204ENST00000398361 PHF14O94880 888 aa25.39■■□□□ 1.66
GPM6B-204ENST00000398361 ITPK1Q13572 414 aa25.39■■□□□ 1.66
GPM6B-204ENST00000398361 GPR162Q16538 588 aa25.39■■□□□ 1.66
GPM6B-204ENST00000398361 PNNQ9H307 717 aaKnown RBP25.39■■□□□ 1.66
GPM6B-204ENST00000398361 MRC1P22897 1456 aa25.39■■□□□ 1.65
GPM6B-204ENST00000398361 COL5A3P25940 1745 aaPredicted RBP25.38■■□□□ 1.65
GPM6B-204ENST00000398361 NEFMP07197 916 aa25.38■■□□□ 1.65
GPM6B-204ENST00000398361 SSFA2P28290 1259 aa25.38■■□□□ 1.65
GPM6B-204ENST00000398361 NFATC2IPQ8NCF5 419 aa25.38■■□□□ 1.65
GPM6B-204ENST00000398361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.37■■□□□ 1.65
GPM6B-204ENST00000398361 AMIGO3Q86WK7 504 aa25.37■■□□□ 1.65
GPM6B-204ENST00000398361 SLC52A2Q9HAB3 445 aa25.37■■□□□ 1.65
GPM6B-204ENST00000398361 ANP32CO43423 234 aa25.36■■□□□ 1.65
GPM6B-204ENST00000398361 IFFO2Q5TF58 517 aa25.36■■□□□ 1.65
GPM6B-204ENST00000398361 NLGN2Q8NFZ4 835 aa25.36■■□□□ 1.65
GPM6B-204ENST00000398361 PLEKHF1Q96S99 279 aa25.36■■□□□ 1.65
GPM6B-204ENST00000398361 GNPATO15228 680 aa25.35■■□□□ 1.65
GPM6B-204ENST00000398361 PELP1Q8IZL8 1130 aaKnown RBP25.35■■□□□ 1.65
GPM6B-204ENST00000398361 RBM42Q9BTD8 480 aaKnown RBP25.35■■□□□ 1.65
GPM6B-204ENST00000398361 SMIM5Q71RC9 77 aa25.34■■□□□ 1.65
GPM6B-204ENST00000398361 WDR43Q15061 677 aaKnown RBP eCLIP25.33■■□□□ 1.65
GPM6B-204ENST00000398361 IL17REQ8NFR9 667 aa25.33■■□□□ 1.65
GPM6B-204ENST00000398361 DLG5Q8TDM6 1919 aa25.33■■□□□ 1.65
GPM6B-204ENST00000398361 MAPK8IP3Q9UPT6 1336 aa25.32■■□□□ 1.64
GPM6B-204ENST00000398361 SIPA1L3O60292 1781 aaPredicted RBP25.31■■□□□ 1.64
GPM6B-204ENST00000398361 CEMIPQ8WUJ3 1361 aa25.31■■□□□ 1.64
GPM6B-204ENST00000398361 HTATSF1O43719 755 aaKnown RBP25.3■■□□□ 1.64
GPM6B-204ENST00000398361 TEFQ10587 303 aa25.3■■□□□ 1.64
GPM6B-204ENST00000398361 RTF1Q92541 710 aaKnown RBP25.3■■□□□ 1.64
GPM6B-204ENST00000398361 SLC4A9Q96Q91 983 aa25.3■■□□□ 1.64
GPM6B-204ENST00000398361 CD2APQ9Y5K6 639 aa25.3■■□□□ 1.64
GPM6B-204ENST00000398361 MYH14Q7Z406 1995 aaKnown RBP25.3■■□□□ 1.64
GPM6B-204ENST00000398361 NFE2L2Q16236 605 aa25.28■■□□□ 1.64
GPM6B-204ENST00000398361 RTCBQ9Y3I0 505 aaKnown RBP25.28■■□□□ 1.64
GPM6B-204ENST00000398361 CICQ96RK0 1608 aaPredicted RBP25.27■■□□□ 1.64
GPM6B-204ENST00000398361 TJP1Q07157 1748 aa25.27■■□□□ 1.64
GPM6B-204ENST00000398361 RC3H1Q5TC82 1133 aaKnown RBP25.27■■□□□ 1.64
GPM6B-204ENST00000398361 ADAMTS8Q9UP79 889 aa25.27■■□□□ 1.64
GPM6B-204ENST00000398361 CNTNAP4Q9C0A0 1308 aa25.27■■□□□ 1.64
GPM6B-204ENST00000398361 C4AP0C0L4 1744 aa25.26■■□□□ 1.63
GPM6B-204ENST00000398361 PTCD1O75127 700 aaKnown RBP25.25■■□□□ 1.63
GPM6B-204ENST00000398361 TRAPPC3LQ5T215 181 aa25.25■■□□□ 1.63
GPM6B-204ENST00000398361 MCM10Q7L590 875 aa25.25■■□□□ 1.63
GPM6B-204ENST00000398361 ZNF784Q8NCA9 323 aaPredicted RBP25.25■■□□□ 1.63
GPM6B-204ENST00000398361 SLC39A6Q13433 755 aa25.24■■□□□ 1.63
GPM6B-204ENST00000398361 CCDC184Q52MB2 194 aa25.24■■□□□ 1.63
GPM6B-204ENST00000398361 UTRNP46939 3433 aa25.24■■□□□ 1.63
GPM6B-204ENST00000398361 UBR2Q8IWV8 1755 aa25.23■■□□□ 1.63
GPM6B-204ENST00000398361 GRIN3BO60391 1043 aa25.23■■□□□ 1.63
GPM6B-204ENST00000398361 ADRA2BP18089 450 aa25.23■■□□□ 1.63
GPM6B-204ENST00000398361 DCTN1Q14203 1278 aa25.23■■□□□ 1.63
GPM6B-204ENST00000398361 CCDC146Q8IYE0 955 aa25.23■■□□□ 1.63
GPM6B-204ENST00000398361 RUNDC1Q96C34 613 aa25.23■■□□□ 1.63
GPM6B-204ENST00000398361 YBX3P16989 372 aaKnown RBP eCLIP25.22■■□□□ 1.63
GPM6B-204ENST00000398361 KCPQ6ZWJ8 1503 aa25.22■■□□□ 1.63
GPM6B-204ENST00000398361 KIF13BQ9NQT8 1826 aa25.21■■□□□ 1.63
GPM6B-204ENST00000398361 RPS6KA4O75676 772 aa25.21■■□□□ 1.63
GPM6B-204ENST00000398361 TTC5Q8N0Z6 440 aa25.2■■□□□ 1.62
GPM6B-204ENST00000398361 TMPOP42166 694 aaKnown RBP25.19■■□□□ 1.62
GPM6B-204ENST00000398361 ARHGEF1Q92888 912 aaKnown RBP25.19■■□□□ 1.62
GPM6B-204ENST00000398361 MRS2Q9HD23 443 aa25.19■■□□□ 1.62
GPM6B-204ENST00000398361 BTBD11A6QL63 1104 aa25.18■■□□□ 1.62
GPM6B-204ENST00000398361 MMP10P09238 476 aa25.18■■□□□ 1.62
GPM6B-204ENST00000398361 RFC4P35249 363 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms