RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 SLC4A10Q6U841 1118 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 PLEKHH1Q9ULM0 1364 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 GRIPAP1Q4V328 841 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 CEP135Q66GS9 1140 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 RPAINQ86UA6 219 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 NAA15Q9BXJ9 866 aaKnown RBP10.56□□□□□ -0.72
TRPM1-202ENST00000397795 CASQ2O14958 399 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-202ENST00000397795 NFXL1Q6ZNB6 911 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 STIM2Q9P246 746 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 NKTRP30414 1462 aaKnown RBP10.56□□□□□ -0.72
TRPM1-202ENST00000397795 ATP2B3Q16720 1220 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 GCC1Q96CN9 775 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 DRC1Q96MC2 740 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 TSPYL2Q9H2G4 693 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-202ENST00000397795 VCXQ9H320 206 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 NEK4P51957 841 aa10.55□□□□□ -0.72
TRPM1-202ENST00000397795 ZNF365Q70YC5 407 aa10.55□□□□□ -0.72
TRPM1-202ENST00000397795 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
TRPM1-202ENST00000397795 FERP16591 822 aa10.55□□□□□ -0.72
TRPM1-202ENST00000397795 SFPQP23246 707 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRPM1-202ENST00000397795 SMC6Q96SB8 1091 aa10.55□□□□□ -0.72
TRPM1-202ENST00000397795 CETN2P41208 172 aa10.55□□□□□ -0.72
TRPM1-202ENST00000397795 SPECC1Q5M775 1068 aa10.55□□□□□ -0.72
TRPM1-202ENST00000397795 TIAM1Q13009 1591 aa10.55□□□□□ -0.72
TRPM1-202ENST00000397795 TAOK3Q9H2K8 898 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 HSF2BPO75031 334 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 PPP2R1AP30153 589 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 ATP6V1AP38606 617 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 LACTBP83111 547 aaPredicted RBP10.54□□□□□ -0.72
TRPM1-202ENST00000397795 CACNA2D3Q8IZS8 1091 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 KIF4BQ2VIQ3 1234 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 CHD1LQ86WJ1 897 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRPM1-202ENST00000397795 WHAMMQ8TF30 809 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 CCDC171Q6TFL3 1326 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 POTEDQ86YR6 584 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 CCDC114Q96M63 670 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 ZC4H2Q9NQZ6 224 aa10.54□□□□□ -0.72
TRPM1-202ENST00000397795 PAFAH1B1P43034 410 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 KRBA2Q6ZNG9 492 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 TMX1Q9H3N1 280 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 ZBTB22O15209 634 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 CAPN2P17655 700 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 SPATS2LQ9NUQ6 558 aaKnown RBP10.53□□□□□ -0.72
TRPM1-202ENST00000397795 SEPT10Q9P0V9 454 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 GCKP35557 465 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 UPF3BQ9BZI7 483 aaKnown RBP10.53□□□□□ -0.72
TRPM1-202ENST00000397795 CWC25Q9NXE8 425 aaPredicted RBP10.53□□□□□ -0.72
TRPM1-202ENST00000397795 ZMYM3Q14202 1370 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 KIF4AO95239 1232 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 DESP17661 470 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 SETDB1Q15047 1291 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 TERF2Q15554 542 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 PUS7Q96PZ0 661 aaKnown RBP10.53□□□□□ -0.72
TRPM1-202ENST00000397795 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 ROCK1Q13464 1354 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 ATP2C2O75185 946 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 SLU7O95391 586 aaKnown RBP10.53□□□□□ -0.72
TRPM1-202ENST00000397795 NBPF11Q86T75 865 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 RUNDC1Q96C34 613 aa10.53□□□□□ -0.72
TRPM1-202ENST00000397795 FIBPO43427 364 aa10.52□□□□□ -0.72
TRPM1-202ENST00000397795 OPA1O60313 960 aa10.52□□□□□ -0.72
TRPM1-202ENST00000397795 STK38Q15208 465 aa10.52□□□□□ -0.72
TRPM1-202ENST00000397795 MIER3Q7Z3K6 550 aa10.52□□□□□ -0.72
TRPM1-202ENST00000397795 DDX12PQ92771 950 aa10.52□□□□□ -0.72
TRPM1-202ENST00000397795 NAIPQ13075 1403 aa10.52□□□□□ -0.72
TRPM1-202ENST00000397795 TTC14Q96N46 770 aa10.52□□□□□ -0.73
TRPM1-202ENST00000397795 VCX3BQ9H321 246 aa10.52□□□□□ -0.73
TRPM1-202ENST00000397795 CHMP2AO43633 222 aa10.52□□□□□ -0.73
TRPM1-202ENST00000397795 PDE1CQ14123 709 aaPredicted RBP10.52□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC27Q2M243 656 aa10.52□□□□□ -0.73
TRPM1-202ENST00000397795 DDX27Q96GQ7 796 aaKnown RBP10.52□□□□□ -0.73
TRPM1-202ENST00000397795 MAP7Q14244 749 aa10.52□□□□□ -0.73
TRPM1-202ENST00000397795 SPA17Q15506 151 aa10.52□□□□□ -0.73
TRPM1-202ENST00000397795 MAATS1Q7Z4T9 603 aa10.52□□□□□ -0.73
TRPM1-202ENST00000397795 GOPCQ9HD26 462 aa10.52□□□□□ -0.73
TRPM1-202ENST00000397795 GSTTP1A0A1W2PQM5 241 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 HCLS1P14317 486 aaPredicted RBP10.51□□□□□ -0.73
TRPM1-202ENST00000397795 FKBP5Q13451 457 aaPredicted RBP10.51□□□□□ -0.73
TRPM1-202ENST00000397795 SATB2Q9UPW6 733 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 NUP155O75694 1391 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 PCK1P35558 622 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 PLPPR3Q6T4P5 718 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 CCDC110Q8TBZ0 833 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 ERO1AQ96HE7 468 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 NUP62CLQ9H1M0 184 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 TSNAXIP1Q2TAA8 658 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 SEPT8Q92599 483 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 FHOD3Q2V2M9 1422 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 BMP2KLQ5H9B9 411 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 MXRA7P84157 204 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
TRPM1-202ENST00000397795 GAS2L2Q8NHY3 880 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 PDLIM2Q96JY6 352 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 YY1AP1Q9H869 796 aa10.51□□□□□ -0.73
TRPM1-202ENST00000397795 KRT85P78386 507 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 ATP11AP98196 1134 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 ICE2Q659A1 982 aa10.5□□□□□ -0.73
TRPM1-202ENST00000397795 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms