RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.79■■□□□ 1.56
PDLIM2-204ENST00000397760 BTBD11A6QL63 1104 aa24.79■■□□□ 1.56
PDLIM2-204ENST00000397760 EXOC5O00471 708 aa24.79■■□□□ 1.56
PDLIM2-204ENST00000397760 ZNF428Q96B54 188 aa24.79■■□□□ 1.56
PDLIM2-204ENST00000397760 BCL2L13Q9BXK5 485 aa24.79■■□□□ 1.56
PDLIM2-204ENST00000397760 NKX1-1Q15270 411 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-204ENST00000397760 BARGINQ6ZT62 677 aa24.78■■□□□ 1.56
PDLIM2-204ENST00000397760 SLC52A2Q9HAB3 445 aa24.78■■□□□ 1.56
PDLIM2-204ENST00000397760 ADAMTS7Q9UKP4 1686 aa24.78■■□□□ 1.56
PDLIM2-204ENST00000397760 SSH1Q8WYL5 1049 aa24.77■■□□□ 1.56
PDLIM2-204ENST00000397760 SMC4Q9NTJ3 1288 aa24.76■■□□□ 1.55
PDLIM2-204ENST00000397760 AFF2P51816 1311 aa24.75■■□□□ 1.55
PDLIM2-204ENST00000397760 ALDH1L2Q3SY69 923 aa24.75■■□□□ 1.55
PDLIM2-204ENST00000397760 NFATC2IPQ8NCF5 419 aa24.75■■□□□ 1.55
PDLIM2-204ENST00000397760 KCNQ3O43525 872 aa24.73■■□□□ 1.55
PDLIM2-204ENST00000397760 CABP4P57796 275 aa24.73■■□□□ 1.55
PDLIM2-204ENST00000397760 DDB1Q16531 1140 aa24.72■■□□□ 1.55
PDLIM2-204ENST00000397760 FRAT1Q92837 279 aaPredicted RBP24.72■■□□□ 1.55
PDLIM2-204ENST00000397760 ERVV-2B6SEH9 535 aa24.72■■□□□ 1.55
PDLIM2-204ENST00000397760 CANXP27824 592 aaKnown RBP24.72■■□□□ 1.55
PDLIM2-204ENST00000397760 EIF4A1P60842 406 aaKnown RBP24.72■■□□□ 1.55
PDLIM2-204ENST00000397760 FAM98CQ17RN3 349 aaKnown RBP24.72■■□□□ 1.55
PDLIM2-204ENST00000397760 SCN11AQ9UI33 1791 aa24.72■■□□□ 1.55
PDLIM2-204ENST00000397760 SHANK3Q9BYB0 1731 aa24.71■■□□□ 1.55
PDLIM2-204ENST00000397760 TNS2Q63HR2 1409 aa24.71■■□□□ 1.55
PDLIM2-204ENST00000397760 ERICH6Q7L0X2 663 aa24.7■■□□□ 1.55
PDLIM2-204ENST00000397760 MRC1P22897 1456 aa24.7■■□□□ 1.54
PDLIM2-204ENST00000397760 TCERG1O14776 1098 aaKnown RBP24.69■■□□□ 1.54
PDLIM2-204ENST00000397760 C20orf194Q5TEA3 1177 aa24.69■■□□□ 1.54
PDLIM2-204ENST00000397760 WNK3Q9BYP7 1800 aa24.69■■□□□ 1.54
PDLIM2-204ENST00000397760 MRPL50Q8N5N7 158 aaKnown RBP24.68■■□□□ 1.54
PDLIM2-204ENST00000397760 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
PDLIM2-204ENST00000397760 SOS1Q07889 1333 aaPredicted RBP24.68■■□□□ 1.54
PDLIM2-204ENST00000397760 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.68■■□□□ 1.54
PDLIM2-204ENST00000397760 SLC39A6Q13433 755 aa24.68■■□□□ 1.54
PDLIM2-204ENST00000397760 ZNF790Q6PG37 636 aa24.68■■□□□ 1.54
PDLIM2-204ENST00000397760 FBXO41Q8TF61 875 aa24.68■■□□□ 1.54
PDLIM2-204ENST00000397760 BRPF1P55201 1214 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-204ENST00000397760 TRPC5Q9UL62 973 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-204ENST00000397760 SIPA1L3O60292 1781 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-204ENST00000397760 GJD4Q96KN9 370 aaPredicted RBP24.66■■□□□ 1.54
PDLIM2-204ENST00000397760 NOB1Q9ULX3 412 aaKnown RBP24.66■■□□□ 1.54
PDLIM2-204ENST00000397760 KIF16BQ96L93 1317 aa24.66■■□□□ 1.54
PDLIM2-204ENST00000397760 KDM3BQ7LBC6 1761 aa24.66■■□□□ 1.54
PDLIM2-204ENST00000397760 ZKSCAN2Q63HK3 967 aa24.65■■□□□ 1.54
PDLIM2-204ENST00000397760 EXOC6Q8TAG9 804 aa24.65■■□□□ 1.54
PDLIM2-204ENST00000397760 ATRNO75882 1429 aa24.63■■□□□ 1.53
PDLIM2-204ENST00000397760 HOXB7P09629 217 aa24.63■■□□□ 1.53
PDLIM2-204ENST00000397760 PDE3AQ14432 1141 aa24.63■■□□□ 1.53
PDLIM2-204ENST00000397760 TTC5Q8N0Z6 440 aa24.63■■□□□ 1.53
PDLIM2-204ENST00000397760 A0A0G2JS52 829 aa24.63■■□□□ 1.53
PDLIM2-204ENST00000397760 IPO8O15397 1037 aaKnown RBP24.63■■□□□ 1.53
PDLIM2-204ENST00000397760 MARCH10Q8NA82 808 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-204ENST00000397760 CCDC30Q5VVM6 783 aa24.62■■□□□ 1.53
PDLIM2-204ENST00000397760 CRBNQ96SW2 442 aa24.62■■□□□ 1.53
PDLIM2-204ENST00000397760 QTRT2Q9H974 415 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-204ENST00000397760 TMOD3Q9NYL9 352 aa24.62■■□□□ 1.53
PDLIM2-204ENST00000397760 HEG1Q9ULI3 1381 aa24.61■■□□□ 1.53
PDLIM2-204ENST00000397760 GIGYF1O75420 1035 aaPredicted RBP24.61■■□□□ 1.53
PDLIM2-204ENST00000397760 ATF7IPQ6VMQ6 1270 aa24.61■■□□□ 1.53
PDLIM2-204ENST00000397760 NECTIN2Q92692 538 aa24.61■■□□□ 1.53
PDLIM2-204ENST00000397760 TNNQ9UQP3 1299 aa24.61■■□□□ 1.53
PDLIM2-204ENST00000397760 MS4A1P11836 297 aa24.6■■□□□ 1.53
PDLIM2-204ENST00000397760 HDGFL1Q5TGJ6 251 aa24.6■■□□□ 1.53
PDLIM2-204ENST00000397760 SLC4A2P04920 1241 aa24.59■■□□□ 1.53
PDLIM2-204ENST00000397760 TRIM27P14373 513 aa24.59■■□□□ 1.53
PDLIM2-204ENST00000397760 PANK1Q8TE04 598 aa24.59■■□□□ 1.53
PDLIM2-204ENST00000397760 CLUAP1Q96AJ1 413 aa24.59■■□□□ 1.53
PDLIM2-204ENST00000397760 ZNF496Q96IT1 587 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-204ENST00000397760 STK31Q9BXU1 1019 aa24.59■■□□□ 1.53
PDLIM2-204ENST00000397760 CHMP4AQ9BY43 222 aa24.59■■□□□ 1.53
PDLIM2-204ENST00000397760 EIF2S2P20042 333 aaKnown RBP24.58■■□□□ 1.53
PDLIM2-204ENST00000397760 PIGBQ92521 554 aa24.58■■□□□ 1.53
PDLIM2-204ENST00000397760 GLI3P10071 1580 aa24.58■■□□□ 1.53
PDLIM2-204ENST00000397760 ARHGAP45Q92619 1136 aa24.58■■□□□ 1.53
PDLIM2-204ENST00000397760 FMNL2Q96PY5 1086 aa24.58■■□□□ 1.53
PDLIM2-204ENST00000397760 DZIP1LQ8IYY4 767 aaKnown RBP24.57■■□□□ 1.52
PDLIM2-204ENST00000397760 TOGARAM1Q9Y4F4 1720 aa24.57■■□□□ 1.52
PDLIM2-204ENST00000397760 RLBP1P12271 317 aa24.56■■□□□ 1.52
PDLIM2-204ENST00000397760 ANP32AP39687 249 aaKnown RBP24.56■■□□□ 1.52
PDLIM2-204ENST00000397760 FTSJ3Q8IY81 847 aaKnown RBP24.56■■□□□ 1.52
PDLIM2-204ENST00000397760 PRAMEF22A3QJZ6 481 aa24.56■■□□□ 1.52
PDLIM2-204ENST00000397760 ONECUT3O60422 494 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-204ENST00000397760 SYTL4Q96C24 671 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-204ENST00000397760 PRIM1P49642 420 aaKnown RBP24.55■■□□□ 1.52
PDLIM2-204ENST00000397760 SNRPA1P09661 255 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-204ENST00000397760 COG6Q9Y2V7 657 aa24.54■■□□□ 1.52
PDLIM2-204ENST00000397760 ZNF772Q68DY9 489 aaPredicted RBP24.53■■□□□ 1.52
PDLIM2-204ENST00000397760 API5Q9BZZ5 524 aaKnown RBP24.53■■□□□ 1.52
PDLIM2-204ENST00000397760 NOP58Q9Y2X3 529 aaKnown RBP24.53■■□□□ 1.52
PDLIM2-204ENST00000397760 BCL9O00512 1426 aa24.53■■□□□ 1.52
PDLIM2-204ENST00000397760 THSD7AQ9UPZ6 1657 aa24.53■■□□□ 1.52
PDLIM2-204ENST00000397760 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
PDLIM2-204ENST00000397760 ASAP1Q9ULH1 1129 aa24.52■■□□□ 1.52
PDLIM2-204ENST00000397760 G2E3Q7L622 706 aa24.51■■□□□ 1.51
PDLIM2-204ENST00000397760 SEPT12Q8IYM1 358 aa24.51■■□□□ 1.51
PDLIM2-204ENST00000397760 ATG3Q9NT62 314 aa24.51■■□□□ 1.51
PDLIM2-204ENST00000397760 PTPRCP08575 1304 aa24.51■■□□□ 1.51
PDLIM2-204ENST00000397760 PTCD1O75127 700 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-204ENST00000397760 CHPF2Q9P2E5 772 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms