RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 STRN4Q9NRL3 753 aa10.08□□□□□ -0.8
LINC00887-201ENST00000397644 NLRP2Q9NX02 1062 aa10.08□□□□□ -0.8
LINC00887-201ENST00000397644 BTG4Q9NY30 223 aa10.08□□□□□ -0.8
LINC00887-201ENST00000397644 CCDC9Q9Y3X0 531 aaKnown RBP10.08□□□□□ -0.8
LINC00887-201ENST00000397644 RREB1Q92766 1687 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 FAM208AQ9UK61 1670 aaKnown RBP10.07□□□□□ -0.8
LINC00887-201ENST00000397644 CPDO75976 1380 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 SENP3-EIF4A1A0A087X0R7 540 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 A0A0G2JS52 829 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 MYT1Q01538 1121 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 NBPF6Q5VWK0 638 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 UNC5CLQ8IV45 518 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 RUNDC1Q96C34 613 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 NBPF4Q96M43 638 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 SALL2Q9Y467 1007 aaPredicted RBP10.07□□□□□ -0.8
LINC00887-201ENST00000397644 NUP188Q5SRE5 1749 aa10.07□□□□□ -0.8
LINC00887-201ENST00000397644 RGPD2P0DJD1 1756 aa10.06□□□□□ -0.8
LINC00887-201ENST00000397644 HNRNPUQ00839 825 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00887-201ENST00000397644 TOM1L2Q6ZVM7 507 aa10.06□□□□□ -0.8
LINC00887-201ENST00000397644 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
LINC00887-201ENST00000397644 ANKRD26Q9UPS8 1709 aa10.06□□□□□ -0.8
LINC00887-201ENST00000397644 RTL1A6NKG5 1358 aa10.05□□□□□ -0.8
LINC00887-201ENST00000397644 APAF1O14727 1248 aa10.05□□□□□ -0.8
LINC00887-201ENST00000397644 PRKAR2BP31323 418 aa10.05□□□□□ -0.8
LINC00887-201ENST00000397644 NEUROD2Q15784 382 aa10.05□□□□□ -0.8
LINC00887-201ENST00000397644 USHBP1Q8N6Y0 703 aa10.05□□□□□ -0.8
LINC00887-201ENST00000397644 PDCD7Q8N8D1 485 aaKnown RBP10.05□□□□□ -0.8
LINC00887-201ENST00000397644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00887-201ENST00000397644 MAPK8IP3Q9UPT6 1336 aa10.05□□□□□ -0.8
LINC00887-201ENST00000397644 NFAT5O94916 1531 aa10.04□□□□□ -0.8
LINC00887-201ENST00000397644 CAMTA1Q9Y6Y1 1673 aa10.04□□□□□ -0.8
LINC00887-201ENST00000397644 LARP1Q6PKG0 1096 aaKnown RBP10.04□□□□□ -0.8
LINC00887-201ENST00000397644 AEBP1Q8IUX7 1158 aa10.04□□□□□ -0.8
LINC00887-201ENST00000397644 TCP11L2Q8N4U5 519 aa10.04□□□□□ -0.8
LINC00887-201ENST00000397644 RNF25Q96BH1 459 aaPredicted RBP10.04□□□□□ -0.8
LINC00887-201ENST00000397644 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
LINC00887-201ENST00000397644 SMG6Q86US8 1419 aaKnown RBP10.04□□□□□ -0.8
LINC00887-201ENST00000397644 RGPD3A6NKT7 1758 aaPredicted RBP10.03□□□□□ -0.8
LINC00887-201ENST00000397644 RGPD4Q7Z3J3 1758 aa10.03□□□□□ -0.8
LINC00887-201ENST00000397644 BLMP54132 1417 aaPredicted RBP10.03□□□□□ -0.8
LINC00887-201ENST00000397644 VPS72Q15906 364 aa10.03□□□□□ -0.8
LINC00887-201ENST00000397644 PHACTR3Q96KR7 559 aa10.03□□□□□ -0.8
LINC00887-201ENST00000397644 PLEKHF1Q96S99 279 aa10.03□□□□□ -0.8
LINC00887-201ENST00000397644 USP35Q9P2H5 1018 aa10.03□□□□□ -0.8
LINC00887-201ENST00000397644 ERBB3P21860 1342 aa10.03□□□□□ -0.8
LINC00887-201ENST00000397644 PEAK1Q9H792 1746 aa10.02□□□□□ -0.8
LINC00887-201ENST00000397644 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
LINC00887-201ENST00000397644 RIPK4P57078 832 aa10.02□□□□□ -0.81
LINC00887-201ENST00000397644 PLEKHO1Q53GL0 409 aaPredicted RBP10.02□□□□□ -0.81
LINC00887-201ENST00000397644 HS6ST3Q8IZP7 471 aa10.02□□□□□ -0.81
LINC00887-201ENST00000397644 SLAIN1Q8ND83 568 aa10.02□□□□□ -0.81
LINC00887-201ENST00000397644 RAPGEF4Q8WZA2 1011 aa10.02□□□□□ -0.81
LINC00887-201ENST00000397644 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.81
LINC00887-201ENST00000397644 CARD10Q9BWT7 1032 aa10.02□□□□□ -0.81
LINC00887-201ENST00000397644 RRP7AQ9Y3A4 280 aaKnown RBP10.02□□□□□ -0.81
LINC00887-201ENST00000397644 COL5A2P05997 1499 aaPredicted RBP10.02□□□□□ -0.81
LINC00887-201ENST00000397644 WDR17Q8IZU2 1322 aa10.02□□□□□ -0.81
LINC00887-201ENST00000397644 IGSF1Q8N6C5 1336 aa10.02□□□□□ -0.81
LINC00887-201ENST00000397644 KAT6BQ8WYB5 2073 aa10.02□□□□□ -0.81
LINC00887-201ENST00000397644 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
LINC00887-201ENST00000397644 TMPOP42166 694 aaKnown RBP10.01□□□□□ -0.81
LINC00887-201ENST00000397644 COL3A1P02461 1466 aaPredicted RBP10.01□□□□□ -0.81
LINC00887-201ENST00000397644 ABCC6O95255 1503 aa10.01□□□□□ -0.81
LINC00887-201ENST00000397644 LRP5O75197 1615 aa10□□□□□ -0.81
LINC00887-201ENST00000397644 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
LINC00887-201ENST00000397644 AMOTQ4VCS5 1084 aa10□□□□□ -0.81
LINC00887-201ENST00000397644 SEPT12Q8IYM1 358 aa10□□□□□ -0.81
LINC00887-201ENST00000397644 NGEFQ8N5V2 710 aa10□□□□□ -0.81
LINC00887-201ENST00000397644 SHANK3Q9BYB0 1731 aa9.99□□□□□ -0.81
LINC00887-201ENST00000397644 NFE2L2Q16236 605 aa9.99□□□□□ -0.81
LINC00887-201ENST00000397644 MTHFSDQ2M296 383 aaKnown RBP9.99□□□□□ -0.81
LINC00887-201ENST00000397644 LCE2DQ5TA82 110 aaPredicted RBP9.99□□□□□ -0.81
LINC00887-201ENST00000397644 SPG7Q9UQ90 795 aa9.99□□□□□ -0.81
LINC00887-201ENST00000397644 DOT1LQ8TEK3 1739 aa9.99□□□□□ -0.81
LINC00887-201ENST00000397644 POTEMA6NI47 508 aa9.98□□□□□ -0.81
LINC00887-201ENST00000397644 IL2RBP14784 551 aa9.98□□□□□ -0.81
LINC00887-201ENST00000397644 DPY19L2Q6NUT2 758 aa9.98□□□□□ -0.81
LINC00887-201ENST00000397644 GAS2L2Q8NHY3 880 aa9.98□□□□□ -0.81
LINC00887-201ENST00000397644 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
LINC00887-201ENST00000397644 NHSQ6T4R5 1651 aa9.98□□□□□ -0.81
LINC00887-201ENST00000397644 SPATA31A5Q5VU36 1347 aa9.98□□□□□ -0.81
LINC00887-201ENST00000397644 SPATA31A7Q8IWB4 1347 aa9.98□□□□□ -0.81
LINC00887-201ENST00000397644 EXOC5O00471 708 aa9.97□□□□□ -0.81
LINC00887-201ENST00000397644 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
LINC00887-201ENST00000397644 KRT27Q7Z3Y8 459 aa9.97□□□□□ -0.81
LINC00887-201ENST00000397644 EFCAB3Q8N7B9 438 aa9.97□□□□□ -0.81
LINC00887-201ENST00000397644 ZCRB1Q8TBF4 217 aaKnown RBP9.97□□□□□ -0.81
LINC00887-201ENST00000397644 BTAF1O14981 1849 aa9.97□□□□□ -0.81
LINC00887-201ENST00000397644 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.96□□□□□ -0.82
LINC00887-201ENST00000397644 LMOD3Q0VAK6 560 aa9.96□□□□□ -0.82
LINC00887-201ENST00000397644 C1orf141Q5JVX7 400 aa9.96□□□□□ -0.82
LINC00887-201ENST00000397644 ZNF530Q6P9A1 599 aaPredicted RBP9.96□□□□□ -0.82
LINC00887-201ENST00000397644 WWC1Q8IX03 1113 aa9.96□□□□□ -0.82
LINC00887-201ENST00000397644 DDX54Q8TDD1 881 aaKnown RBP9.96□□□□□ -0.82
LINC00887-201ENST00000397644 L3MBTL3Q96JM7 780 aaPredicted RBP9.96□□□□□ -0.82
LINC00887-201ENST00000397644 ZFP91Q96JP5 570 aaPredicted RBP9.96□□□□□ -0.82
LINC00887-201ENST00000397644 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.96□□□□□ -0.82
LINC00887-201ENST00000397644 THRAP3Q9Y2W1 955 aaKnown RBP9.96□□□□□ -0.82
LINC00887-201ENST00000397644 SPATA31A1Q5TZJ5 1347 aa9.96□□□□□ -0.82
LINC00887-201ENST00000397644 KDRP35968 1356 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms