RNA–Protein interactions for RNA: ENST00000397561.3

LDHAP4-201, Transcript of lactate dehydrogenase A pseudogene 4, humanhuman

BASIC

Gene LDHAP4, Length 998 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHAP4-201ENST00000397561 EP400Q96L91 3159 aa11.62□□□□□ -0.55
LDHAP4-201ENST00000397561 DDX54Q8TDD1 881 aaKnown RBP11.62□□□□□ -0.55
LDHAP4-201ENST00000397561 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
LDHAP4-201ENST00000397561 TRPC5Q9UL62 973 aaPredicted RBP11.62□□□□□ -0.55
LDHAP4-201ENST00000397561 ZNF853P0CG23 659 aa11.61□□□□□ -0.55
LDHAP4-201ENST00000397561 QTRT2Q9H974 415 aaKnown RBP11.61□□□□□ -0.55
LDHAP4-201ENST00000397561 IFT57Q9NWB7 429 aa11.61□□□□□ -0.55
LDHAP4-201ENST00000397561 DDB1Q16531 1140 aa11.6□□□□□ -0.55
LDHAP4-201ENST00000397561 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
LDHAP4-201ENST00000397561 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
LDHAP4-201ENST00000397561 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
LDHAP4-201ENST00000397561 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
LDHAP4-201ENST00000397561 TJP1Q07157 1748 aa11.6□□□□□ -0.55
LDHAP4-201ENST00000397561 EXOC5O00471 708 aa11.59□□□□□ -0.55
LDHAP4-201ENST00000397561 GNAI1P63096 354 aa11.59□□□□□ -0.55
LDHAP4-201ENST00000397561 CALD1Q05682 793 aaKnown RBP11.59□□□□□ -0.55
LDHAP4-201ENST00000397561 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
LDHAP4-201ENST00000397561 RGS17Q9UGC6 210 aaPredicted RBP11.59□□□□□ -0.55
LDHAP4-201ENST00000397561 LY75O60449 1722 aa11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 A0A0G2JS52 829 aa11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 CHL1O00533 1208 aa11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 MYT1Q01538 1121 aa11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 EXOSC9Q06265 439 aaKnown RBP11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 KRT24Q2M2I5 525 aa11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 MARCH10Q8NA82 808 aaPredicted RBP11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 MYH16Q9H6N6 1097 aa11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 TAF1LQ8IZX4 1826 aa11.58□□□□□ -0.56
LDHAP4-201ENST00000397561 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 KCPQ6ZWJ8 1503 aa11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 HSP90AB1P08238 724 aaKnown RBP11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 TEFQ10587 303 aa11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 TAF7Q15545 349 aaPredicted RBP11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 ZNF772Q68DY9 489 aaPredicted RBP11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 SLC52A2Q9HAB3 445 aa11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 TSPYL4Q9UJ04 414 aa11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 TNS1Q9HBL0 1735 aaKnown RBP11.57□□□□□ -0.56
LDHAP4-201ENST00000397561 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
LDHAP4-201ENST00000397561 KCNQ3O43525 872 aa11.56□□□□□ -0.56
LDHAP4-201ENST00000397561 TSPYL6Q8N831 410 aa11.56□□□□□ -0.56
LDHAP4-201ENST00000397561 NFATC2IPQ8NCF5 419 aa11.56□□□□□ -0.56
LDHAP4-201ENST00000397561 CICQ96RK0 1608 aaPredicted RBP11.56□□□□□ -0.56
LDHAP4-201ENST00000397561 RGS12O14924 1447 aa11.55□□□□□ -0.56
LDHAP4-201ENST00000397561 BTBD11A6QL63 1104 aa11.55□□□□□ -0.56
LDHAP4-201ENST00000397561 ONECUT3O60422 494 aaPredicted RBP11.55□□□□□ -0.56
LDHAP4-201ENST00000397561 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
LDHAP4-201ENST00000397561 SEPT12Q8IYM1 358 aa11.55□□□□□ -0.56
LDHAP4-201ENST00000397561 C8orf58Q8NAV2 365 aa11.55□□□□□ -0.56
LDHAP4-201ENST00000397561 ELL2O00472 640 aaPredicted RBP11.54□□□□□ -0.56
LDHAP4-201ENST00000397561 CABP4P57796 275 aa11.54□□□□□ -0.56
LDHAP4-201ENST00000397561 SLC39A6Q13433 755 aa11.54□□□□□ -0.56
LDHAP4-201ENST00000397561 POTEAQ6S8J7 498 aa11.54□□□□□ -0.56
LDHAP4-201ENST00000397561 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
LDHAP4-201ENST00000397561 ZNF831Q5JPB2 1677 aa11.54□□□□□ -0.56
LDHAP4-201ENST00000397561 BCL9O00512 1426 aa11.53□□□□□ -0.56
LDHAP4-201ENST00000397561 ERVV-2B6SEH9 535 aa11.53□□□□□ -0.56
LDHAP4-201ENST00000397561 RBM6P78332 1123 aaKnown RBP11.53□□□□□ -0.56
LDHAP4-201ENST00000397561 RCAN3Q9UKA8 241 aa11.53□□□□□ -0.56
LDHAP4-201ENST00000397561 MYH14Q7Z406 1995 aaKnown RBP11.53□□□□□ -0.56
LDHAP4-201ENST00000397561 EIF4A1P60842 406 aaKnown RBP11.52□□□□□ -0.57
LDHAP4-201ENST00000397561 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.57
LDHAP4-201ENST00000397561 POTEHQ6S545 545 aa11.52□□□□□ -0.57
LDHAP4-201ENST00000397561 BABAM1Q9NWV8 329 aa11.52□□□□□ -0.57
LDHAP4-201ENST00000397561 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
LDHAP4-201ENST00000397561 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 AFDNP55196 1824 aaKnown RBP11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 VAMP4O75379 141 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 ZNF790Q6PG37 636 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 PIGBQ92521 554 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 SYTL4Q96C24 671 aaPredicted RBP11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 BCL2L13Q9BXK5 485 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 RREB1Q92766 1687 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 NUP188Q5SRE5 1749 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 HEG1Q9ULI3 1381 aa11.51□□□□□ -0.57
LDHAP4-201ENST00000397561 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
LDHAP4-201ENST00000397561 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
LDHAP4-201ENST00000397561 KCNQ2O43526 872 aa11.5□□□□□ -0.57
LDHAP4-201ENST00000397561 BCAR3O75815 825 aa11.5□□□□□ -0.57
LDHAP4-201ENST00000397561 RXRBP28702 533 aa11.5□□□□□ -0.57
LDHAP4-201ENST00000397561 PRIM1P49642 420 aaKnown RBP11.5□□□□□ -0.57
LDHAP4-201ENST00000397561 RARSP54136 660 aaKnown RBP11.5□□□□□ -0.57
LDHAP4-201ENST00000397561 PTF1AQ7RTS3 328 aa11.5□□□□□ -0.57
LDHAP4-201ENST00000397561 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
LDHAP4-201ENST00000397561 ASAP1Q9ULH1 1129 aa11.49□□□□□ -0.57
LDHAP4-201ENST00000397561 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
LDHAP4-201ENST00000397561 CT47B1P0C2W7 299 aaPredicted RBP11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 KRT27Q7Z3Y8 459 aa11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 TTC5Q8N0Z6 440 aa11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 SSH1Q8WYL5 1049 aa11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 NECTIN2Q92692 538 aa11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 RGPD3A6NKT7 1758 aaPredicted RBP11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 ANKRD36CQ5JPF3 1778 aa11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 RGPD4Q7Z3J3 1758 aa11.48□□□□□ -0.57
LDHAP4-201ENST00000397561 NUP98P52948 1817 aa11.47□□□□□ -0.57
LDHAP4-201ENST00000397561 PLIN1O60240 522 aa11.47□□□□□ -0.57
LDHAP4-201ENST00000397561 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
LDHAP4-201ENST00000397561 RRP1P56182 461 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms