RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ASAP1Q9ULH1 1129 aa20.89■□□□□ 0.93
SEC13-206ENST00000397102 ZNF831Q5JPB2 1677 aa20.88■□□□□ 0.93
SEC13-206ENST00000397102 BRCA1P38398 1863 aaKnown RBP20.88■□□□□ 0.93
SEC13-206ENST00000397102 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
SEC13-206ENST00000397102 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
SEC13-206ENST00000397102 IFNL2Q8IZJ0 200 aa20.86■□□□□ 0.93
SEC13-206ENST00000397102 BCS1LQ9Y276 419 aa20.86■□□□□ 0.93
SEC13-206ENST00000397102 C4AP0C0L4 1744 aa20.86■□□□□ 0.93
SEC13-206ENST00000397102 WDR90Q96KV7 1748 aa20.86■□□□□ 0.93
SEC13-206ENST00000397102 KDRP35968 1356 aa20.85■□□□□ 0.93
SEC13-206ENST00000397102 WASHC2AQ641Q2 1341 aa20.85■□□□□ 0.93
SEC13-206ENST00000397102 PHKG2P15735 406 aa20.85■□□□□ 0.93
SEC13-206ENST00000397102 NLGN1Q8N2Q7 840 aa20.85■□□□□ 0.93
SEC13-206ENST00000397102 DNAJC5GQ8N7S2 189 aa20.85■□□□□ 0.93
SEC13-206ENST00000397102 EYA1Q99502 592 aa20.85■□□□□ 0.93
SEC13-206ENST00000397102 ATG3Q9NT62 314 aa20.85■□□□□ 0.93
SEC13-206ENST00000397102 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
SEC13-206ENST00000397102 PPM1GO15355 546 aaPredicted RBP20.84■□□□□ 0.93
SEC13-206ENST00000397102 TRAPPC3LQ5T215 181 aa20.84■□□□□ 0.93
SEC13-206ENST00000397102 CARD14Q9BXL6 1004 aa20.84■□□□□ 0.93
SEC13-206ENST00000397102 RTCBQ9Y3I0 505 aaKnown RBP20.84■□□□□ 0.93
SEC13-206ENST00000397102 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.93
SEC13-206ENST00000397102 A0A0G2JLW4 131 aa20.83■□□□□ 0.93
SEC13-206ENST00000397102 PLEKHG2Q9H7P9 1386 aa20.83■□□□□ 0.92
SEC13-206ENST00000397102 ARHGAP27Q6ZUM4 889 aa20.82■□□□□ 0.92
SEC13-206ENST00000397102 NMRK2Q9NPI5 230 aa20.82■□□□□ 0.92
SEC13-206ENST00000397102 CCDC87Q9NVE4 849 aa20.82■□□□□ 0.92
SEC13-206ENST00000397102 ADRA2BP18089 450 aa20.81■□□□□ 0.92
SEC13-206ENST00000397102 DPEP1P16444 411 aa20.8■□□□□ 0.92
SEC13-206ENST00000397102 RC3H1Q5TC82 1133 aaKnown RBP20.8■□□□□ 0.92
SEC13-206ENST00000397102 FCHSD2O94868 740 aa20.79■□□□□ 0.92
SEC13-206ENST00000397102 RBM46Q8TBY0 533 aaKnown RBP20.79■□□□□ 0.92
SEC13-206ENST00000397102 ARHGEF1Q92888 912 aaKnown RBP20.79■□□□□ 0.92
SEC13-206ENST00000397102 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
SEC13-206ENST00000397102 GYS1P13807 737 aa20.78■□□□□ 0.92
SEC13-206ENST00000397102 SLC4A9Q96Q91 983 aa20.78■□□□□ 0.92
SEC13-206ENST00000397102 RBM42Q9BTD8 480 aaKnown RBP20.77■□□□□ 0.92
SEC13-206ENST00000397102 PARP3Q9Y6F1 533 aa20.77■□□□□ 0.92
SEC13-206ENST00000397102 MYH14Q7Z406 1995 aaKnown RBP20.77■□□□□ 0.92
SEC13-206ENST00000397102 ERVV-2B6SEH9 535 aa20.76■□□□□ 0.91
SEC13-206ENST00000397102 RPS6KA4O75676 772 aa20.76■□□□□ 0.91
SEC13-206ENST00000397102 RFC4P35249 363 aa20.76■□□□□ 0.91
SEC13-206ENST00000397102 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
SEC13-206ENST00000397102 C9orf131Q5VYM1 1079 aa20.75■□□□□ 0.91
SEC13-206ENST00000397102 C16orf71Q8IYS4 520 aaPredicted RBP20.75■□□□□ 0.91
SEC13-206ENST00000397102 KCNA3P22001 575 aa20.74■□□□□ 0.91
SEC13-206ENST00000397102 FSTL1Q12841 308 aa20.74■□□□□ 0.91
SEC13-206ENST00000397102 TNRC6CQ9HCJ0 1690 aaKnown RBP20.73■□□□□ 0.91
SEC13-206ENST00000397102 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
SEC13-206ENST00000397102 EIF4A2Q14240 407 aaKnown RBP20.73■□□□□ 0.91
SEC13-206ENST00000397102 KLRG1Q96E93 195 aa20.73■□□□□ 0.91
SEC13-206ENST00000397102 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
SEC13-206ENST00000397102 PIM2Q9P1W9 311 aa20.73■□□□□ 0.91
SEC13-206ENST00000397102 KCPQ6ZWJ8 1503 aa20.73■□□□□ 0.91
SEC13-206ENST00000397102 JMYQ8N9B5 988 aa20.72■□□□□ 0.91
SEC13-206ENST00000397102 KDM2BQ8NHM5 1336 aa20.72■□□□□ 0.91
SEC13-206ENST00000397102 SBF1O95248 1867 aa20.71■□□□□ 0.91
SEC13-206ENST00000397102 KDM6AO15550 1401 aaPredicted RBP20.7■□□□□ 0.9
SEC13-206ENST00000397102 HTRA3P83110 453 aa20.69■□□□□ 0.9
SEC13-206ENST00000397102 DALRD3Q5D0E6 543 aaKnown RBP20.69■□□□□ 0.9
SEC13-206ENST00000397102 TJP1Q07157 1748 aa20.68■□□□□ 0.9
SEC13-206ENST00000397102 CABP4P57796 275 aa20.68■□□□□ 0.9
SEC13-206ENST00000397102 PLEKHO1Q53GL0 409 aaPredicted RBP20.68■□□□□ 0.9
SEC13-206ENST00000397102 RNF181Q9P0P0 153 aa20.68■□□□□ 0.9
SEC13-206ENST00000397102 USP42Q9H9J4 1324 aaKnown RBP20.68■□□□□ 0.9
SEC13-206ENST00000397102 CRKLP46109 303 aaKnown RBP20.66■□□□□ 0.9
SEC13-206ENST00000397102 DDR1Q08345 913 aa20.66■□□□□ 0.9
SEC13-206ENST00000397102 FKBP8Q14318 412 aa20.66■□□□□ 0.9
SEC13-206ENST00000397102 COL13A1Q5TAT6 717 aaPredicted RBP20.66■□□□□ 0.9
SEC13-206ENST00000397102 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
SEC13-206ENST00000397102 SRP68Q9UHB9 627 aaKnown RBP20.66■□□□□ 0.9
SEC13-206ENST00000397102 ADAMTS7Q9UKP4 1686 aa20.66■□□□□ 0.9
SEC13-206ENST00000397102 AMOTQ4VCS5 1084 aa20.65■□□□□ 0.9
SEC13-206ENST00000397102 RRAGCQ9HB90 399 aa20.65■□□□□ 0.9
SEC13-206ENST00000397102 PTCD1O75127 700 aaKnown RBP20.64■□□□□ 0.89
SEC13-206ENST00000397102 TNNT2P45379 298 aaPredicted RBP20.64■□□□□ 0.89
SEC13-206ENST00000397102 CHRNA5P30532 468 aa20.63■□□□□ 0.89
SEC13-206ENST00000397102 SMC1BQ8NDV3 1235 aa20.63■□□□□ 0.89
SEC13-206ENST00000397102 ZC3H4Q9UPT8 1303 aaKnown RBP20.62■□□□□ 0.89
SEC13-206ENST00000397102 MTHFSP49914 203 aa20.62■□□□□ 0.89
SEC13-206ENST00000397102 SCN11AQ9UI33 1791 aa20.62■□□□□ 0.89
SEC13-206ENST00000397102 POLRMTO00411 1230 aaKnown RBP20.61■□□□□ 0.89
SEC13-206ENST00000397102 C1orf141Q5JVX7 400 aa20.61■□□□□ 0.89
SEC13-206ENST00000397102 DLEC1Q9Y238 1755 aa20.61■□□□□ 0.89
SEC13-206ENST00000397102 AFDNP55196 1824 aaKnown RBP20.6■□□□□ 0.89
SEC13-206ENST00000397102 TM4SF1P30408 202 aa20.6■□□□□ 0.89
SEC13-206ENST00000397102 NFATC2IPQ8NCF5 419 aa20.6■□□□□ 0.89
SEC13-206ENST00000397102 NRXN2Q9P2S2 1712 aa20.59■□□□□ 0.89
SEC13-206ENST00000397102 INTS5Q6P9B9 1019 aaKnown RBP20.58■□□□□ 0.89
SEC13-206ENST00000397102 TNS4Q8IZW8 715 aa20.58■□□□□ 0.89
SEC13-206ENST00000397102 TIAM2Q8IVF5 1701 aa20.58■□□□□ 0.88
SEC13-206ENST00000397102 ZPR1O75312 459 aa20.57■□□□□ 0.88
SEC13-206ENST00000397102 RASSF7Q02833 373 aa20.57■□□□□ 0.88
SEC13-206ENST00000397102 CCDC88AQ3V6T2 1871 aa20.56■□□□□ 0.88
SEC13-206ENST00000397102 CAPN15O75808 1086 aa20.56■□□□□ 0.88
SEC13-206ENST00000397102 USPL1Q5W0Q7 1092 aa20.56■□□□□ 0.88
SEC13-206ENST00000397102 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
SEC13-206ENST00000397102 LMNB1P20700 586 aa20.55■□□□□ 0.88
SEC13-206ENST00000397102 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
SEC13-206ENST00000397102 GLTPD2A6NH11 291 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms