RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
MCF2L-206ENST00000397021 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
MCF2L-206ENST00000397021 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
MCF2L-206ENST00000397021 SPON1Q9HCB6 807 aa12.91□□□□□ -0.34
MCF2L-206ENST00000397021 MYBBP1AQ9BQG0 1328 aaKnown RBP12.9□□□□□ -0.34
MCF2L-206ENST00000397021 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
MCF2L-206ENST00000397021 AMIGO3Q86WK7 504 aa12.9□□□□□ -0.34
MCF2L-206ENST00000397021 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
MCF2L-206ENST00000397021 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-206ENST00000397021 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
MCF2L-206ENST00000397021 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
MCF2L-206ENST00000397021 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
MCF2L-206ENST00000397021 PHF14O94880 888 aa12.88□□□□□ -0.35
MCF2L-206ENST00000397021 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-206ENST00000397021 AK7Q96M32 723 aa12.88□□□□□ -0.35
MCF2L-206ENST00000397021 PPP1R1BQ9UD71 204 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-206ENST00000397021 LY75O60449 1722 aa12.88□□□□□ -0.35
MCF2L-206ENST00000397021 PTGER2P43116 358 aa12.87□□□□□ -0.35
MCF2L-206ENST00000397021 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
MCF2L-206ENST00000397021 MCM10Q7L590 875 aa12.87□□□□□ -0.35
MCF2L-206ENST00000397021 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
MCF2L-206ENST00000397021 ITGB4P16144 1822 aa12.87□□□□□ -0.35
MCF2L-206ENST00000397021 GNPATO15228 680 aa12.86□□□□□ -0.35
MCF2L-206ENST00000397021 TEFQ10587 303 aa12.86□□□□□ -0.35
MCF2L-206ENST00000397021 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
MCF2L-206ENST00000397021 LRP5O75197 1615 aa12.85□□□□□ -0.35
MCF2L-206ENST00000397021 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
MCF2L-206ENST00000397021 NEFMP07197 916 aa12.85□□□□□ -0.35
MCF2L-206ENST00000397021 MSL1Q68DK7 614 aa12.85□□□□□ -0.35
MCF2L-206ENST00000397021 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
MCF2L-206ENST00000397021 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
MCF2L-206ENST00000397021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.84□□□□□ -0.35
MCF2L-206ENST00000397021 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
MCF2L-206ENST00000397021 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
MCF2L-206ENST00000397021 MRC1P22897 1456 aa12.84□□□□□ -0.35
MCF2L-206ENST00000397021 KCNQ3O43525 872 aa12.83□□□□□ -0.36
MCF2L-206ENST00000397021 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
MCF2L-206ENST00000397021 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.36
MCF2L-206ENST00000397021 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
MCF2L-206ENST00000397021 WDR43Q15061 677 aaKnown RBP eCLIP12.82□□□□□ -0.36
MCF2L-206ENST00000397021 NFE2L2Q16236 605 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 CCDC184Q52MB2 194 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 TTC5Q8N0Z6 440 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 SLC16A10Q8TF71 515 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 RRP7AQ9Y3A4 280 aaKnown RBP12.82□□□□□ -0.36
MCF2L-206ENST00000397021 C5P01031 1676 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
MCF2L-206ENST00000397021 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
MCF2L-206ENST00000397021 SSFA2P28290 1259 aa12.81□□□□□ -0.36
MCF2L-206ENST00000397021 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
MCF2L-206ENST00000397021 ZNF790Q6PG37 636 aa12.81□□□□□ -0.36
MCF2L-206ENST00000397021 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
MCF2L-206ENST00000397021 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
MCF2L-206ENST00000397021 ZNF496Q96IT1 587 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-206ENST00000397021 ARXQ96QS3 562 aa12.81□□□□□ -0.36
MCF2L-206ENST00000397021 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
MCF2L-206ENST00000397021 MIS18AQ9NYP9 233 aa12.81□□□□□ -0.36
MCF2L-206ENST00000397021 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
MCF2L-206ENST00000397021 SCN11AQ9UI33 1791 aa12.8□□□□□ -0.36
MCF2L-206ENST00000397021 POLD1P28340 1107 aa12.8□□□□□ -0.36
MCF2L-206ENST00000397021 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
MCF2L-206ENST00000397021 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
MCF2L-206ENST00000397021 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-206ENST00000397021 CNTNAP4Q9C0A0 1308 aa12.8□□□□□ -0.36
MCF2L-206ENST00000397021 ADAMTS7Q9UKP4 1686 aa12.8□□□□□ -0.36
MCF2L-206ENST00000397021 KCPQ6ZWJ8 1503 aa12.79□□□□□ -0.36
MCF2L-206ENST00000397021 ANP32CO43423 234 aa12.79□□□□□ -0.36
MCF2L-206ENST00000397021 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
MCF2L-206ENST00000397021 RPS6KA4O75676 772 aa12.79□□□□□ -0.36
MCF2L-206ENST00000397021 RIPK4P57078 832 aa12.79□□□□□ -0.36
MCF2L-206ENST00000397021 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
MCF2L-206ENST00000397021 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
MCF2L-206ENST00000397021 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
MCF2L-206ENST00000397021 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
MCF2L-206ENST00000397021 CYP19A1P11511 503 aaPredicted RBP12.78□□□□□ -0.36
MCF2L-206ENST00000397021 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
MCF2L-206ENST00000397021 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
MCF2L-206ENST00000397021 TUBGCP6Q96RT7 1819 aa12.77□□□□□ -0.37
MCF2L-206ENST00000397021 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.37
MCF2L-206ENST00000397021 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-206ENST00000397021 RUNDC1Q96C34 613 aa12.77□□□□□ -0.37
MCF2L-206ENST00000397021 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
MCF2L-206ENST00000397021 SYT17Q9BSW7 474 aa12.77□□□□□ -0.37
MCF2L-206ENST00000397021 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
MCF2L-206ENST00000397021 ZBTB1Q9Y2K1 713 aa12.77□□□□□ -0.37
MCF2L-206ENST00000397021 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.37
MCF2L-206ENST00000397021 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
MCF2L-206ENST00000397021 RFC4P35249 363 aa12.76□□□□□ -0.37
MCF2L-206ENST00000397021 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
MCF2L-206ENST00000397021 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
MCF2L-206ENST00000397021 TJP1Q07157 1748 aa12.74□□□□□ -0.37
MCF2L-206ENST00000397021 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-206ENST00000397021 STARD3NLO95772 234 aa12.74□□□□□ -0.37
MCF2L-206ENST00000397021 A1BGP04217 495 aa12.74□□□□□ -0.37
MCF2L-206ENST00000397021 ADRA2BP18089 450 aa12.74□□□□□ -0.37
MCF2L-206ENST00000397021 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-206ENST00000397021 MRS2Q9HD23 443 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms