RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 SPG7Q9UQ90 795 aa21.71■■□□□ 1.07
SCNN1A-205ENST00000396966 PKD1L3Q7Z443 1732 aa21.71■■□□□ 1.07
SCNN1A-205ENST00000396966 PARP4Q9UKK3 1724 aaKnown RBP21.7■■□□□ 1.06
SCNN1A-205ENST00000396966 STK31Q9BXU1 1019 aa21.7■■□□□ 1.06
SCNN1A-205ENST00000396966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.7■■□□□ 1.06
SCNN1A-205ENST00000396966 SLC4A2P04920 1241 aa21.69■■□□□ 1.06
SCNN1A-205ENST00000396966 FAM161AQ3B820 660 aa21.69■■□□□ 1.06
SCNN1A-205ENST00000396966 ZBTB40Q9NUA8 1239 aa21.69■■□□□ 1.06
SCNN1A-205ENST00000396966 AHDC1Q5TGY3 1603 aaPredicted RBP21.69■■□□□ 1.06
SCNN1A-205ENST00000396966 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
SCNN1A-205ENST00000396966 MEGF6O75095 1541 aa21.69■■□□□ 1.06
SCNN1A-205ENST00000396966 C8orf34Q49A92 452 aa21.68■■□□□ 1.06
SCNN1A-205ENST00000396966 WDR17Q8IZU2 1322 aa21.68■■□□□ 1.06
SCNN1A-205ENST00000396966 BTBD11A6QL63 1104 aa21.67■■□□□ 1.06
SCNN1A-205ENST00000396966 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
SCNN1A-205ENST00000396966 CHMP4AQ9BY43 222 aa21.66■■□□□ 1.06
SCNN1A-205ENST00000396966 ZBTB7BO15156 539 aaPredicted RBP21.66■■□□□ 1.06
SCNN1A-205ENST00000396966 HDAC1Q13547 482 aaPredicted RBP21.64■■□□□ 1.06
SCNN1A-205ENST00000396966 TOM1L2Q6ZVM7 507 aa21.64■■□□□ 1.06
SCNN1A-205ENST00000396966 IFNL2Q8IZJ0 200 aa21.64■■□□□ 1.06
SCNN1A-205ENST00000396966 EIF4A1P60842 406 aaKnown RBP21.64■■□□□ 1.05
SCNN1A-205ENST00000396966 RGS12O14924 1447 aa21.64■■□□□ 1.05
SCNN1A-205ENST00000396966 COL22A1Q8NFW1 1626 aaPredicted RBP21.63■■□□□ 1.05
SCNN1A-205ENST00000396966 HOXB7P09629 217 aa21.63■■□□□ 1.05
SCNN1A-205ENST00000396966 PHKG2P15735 406 aa21.63■■□□□ 1.05
SCNN1A-205ENST00000396966 INTS3Q68E01 1043 aaKnown RBP21.63■■□□□ 1.05
SCNN1A-205ENST00000396966 DDRGK1Q96HY6 314 aa21.62■■□□□ 1.05
SCNN1A-205ENST00000396966 EVA1CP58658 441 aa21.61■■□□□ 1.05
SCNN1A-205ENST00000396966 HDGFL1Q5TGJ6 251 aa21.61■■□□□ 1.05
SCNN1A-205ENST00000396966 PHLPP1O60346 1717 aa21.61■■□□□ 1.05
SCNN1A-205ENST00000396966 COL14A1Q05707 1796 aaKnown RBP21.61■■□□□ 1.05
SCNN1A-205ENST00000396966 HSP90AB1P08238 724 aaKnown RBP21.6■■□□□ 1.05
SCNN1A-205ENST00000396966 DEKP35659 375 aaKnown RBP21.6■■□□□ 1.05
SCNN1A-205ENST00000396966 RTL5Q5HYW3 569 aaPredicted RBP21.6■■□□□ 1.05
SCNN1A-205ENST00000396966 G2E3Q7L622 706 aa21.6■■□□□ 1.05
SCNN1A-205ENST00000396966 NECTIN2Q92692 538 aa21.6■■□□□ 1.05
SCNN1A-205ENST00000396966 CARD10Q9BWT7 1032 aa21.6■■□□□ 1.05
SCNN1A-205ENST00000396966 N4BP2Q86UW6 1770 aaPredicted RBP21.59■■□□□ 1.05
SCNN1A-205ENST00000396966 KDM6AO15550 1401 aaPredicted RBP21.59■■□□□ 1.05
SCNN1A-205ENST00000396966 KCNQ3O43525 872 aa21.58■■□□□ 1.04
SCNN1A-205ENST00000396966 FLIIQ13045 1269 aa21.58■■□□□ 1.04
SCNN1A-205ENST00000396966 DCAF5Q96JK2 942 aa21.58■■□□□ 1.04
SCNN1A-205ENST00000396966 STRN4Q9NRL3 753 aa21.58■■□□□ 1.04
SCNN1A-205ENST00000396966 SLC4A3P48751 1232 aa21.57■■□□□ 1.04
SCNN1A-205ENST00000396966 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
SCNN1A-205ENST00000396966 CCT4P50991 539 aaKnown RBP21.56■■□□□ 1.04
SCNN1A-205ENST00000396966 FKBP5Q13451 457 aaPredicted RBP21.56■■□□□ 1.04
SCNN1A-205ENST00000396966 PDZRN3Q9UPQ7 1066 aa21.56■■□□□ 1.04
SCNN1A-205ENST00000396966 CYP27B1O15528 508 aa21.56■■□□□ 1.04
SCNN1A-205ENST00000396966 EIF2S2P20042 333 aaKnown RBP21.56■■□□□ 1.04
SCNN1A-205ENST00000396966 MRC1P22897 1456 aa21.55■■□□□ 1.04
SCNN1A-205ENST00000396966 IL2RBP14784 551 aa21.55■■□□□ 1.04
SCNN1A-205ENST00000396966 LARP1Q6PKG0 1096 aaKnown RBP21.55■■□□□ 1.04
SCNN1A-205ENST00000396966 ZCRB1Q8TBF4 217 aaKnown RBP21.55■■□□□ 1.04
SCNN1A-205ENST00000396966 PCDH11XQ9BZA7 1347 aa21.55■■□□□ 1.04
SCNN1A-205ENST00000396966 PCDH11YQ9BZA8 1340 aa21.55■■□□□ 1.04
SCNN1A-205ENST00000396966 SLC4A10Q6U841 1118 aa21.54■■□□□ 1.04
SCNN1A-205ENST00000396966 C1orf115Q9H7X2 142 aa21.54■■□□□ 1.04
SCNN1A-205ENST00000396966 COL16A1Q07092 1604 aaPredicted RBP21.54■■□□□ 1.04
SCNN1A-205ENST00000396966 SMC5Q8IY18 1101 aa21.54■■□□□ 1.04
SCNN1A-205ENST00000396966 HEG1Q9ULI3 1381 aa21.54■■□□□ 1.04
SCNN1A-205ENST00000396966 SHANK3Q9BYB0 1731 aa21.53■■□□□ 1.04
SCNN1A-205ENST00000396966 TOM1O60784 492 aa21.53■■□□□ 1.04
SCNN1A-205ENST00000396966 F6X3S4 739 aa21.52■■□□□ 1.04
SCNN1A-205ENST00000396966 GIGYF1O75420 1035 aaPredicted RBP21.52■■□□□ 1.04
SCNN1A-205ENST00000396966 NFATC2IPQ8NCF5 419 aa21.52■■□□□ 1.04
SCNN1A-205ENST00000396966 BTG4Q9NY30 223 aa21.52■■□□□ 1.04
SCNN1A-205ENST00000396966 PXDNLA1KZ92 1463 aa21.52■■□□□ 1.04
SCNN1A-205ENST00000396966 DAXXQ9UER7 740 aaPredicted RBP21.52■■□□□ 1.04
SCNN1A-205ENST00000396966 ZNF790Q6PG37 636 aa21.51■■□□□ 1.03
SCNN1A-205ENST00000396966 GCC1Q96CN9 775 aa21.5■■□□□ 1.03
SCNN1A-205ENST00000396966 CHPF2Q9P2E5 772 aa21.5■■□□□ 1.03
SCNN1A-205ENST00000396966 C5P01031 1676 aa21.5■■□□□ 1.03
SCNN1A-205ENST00000396966 CABP4P57796 275 aa21.5■■□□□ 1.03
SCNN1A-205ENST00000396966 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
SCNN1A-205ENST00000396966 PHAXQ9H814 394 aaKnown RBP21.49■■□□□ 1.03
SCNN1A-205ENST00000396966 TTC5Q8N0Z6 440 aa21.48■■□□□ 1.03
SCNN1A-205ENST00000396966 PLCH1Q4KWH8 1693 aa21.48■■□□□ 1.03
SCNN1A-205ENST00000396966 SLC39A6Q13433 755 aa21.47■■□□□ 1.03
SCNN1A-205ENST00000396966 RPAP2Q8IXW5 612 aaPredicted RBP21.47■■□□□ 1.03
SCNN1A-205ENST00000396966 MEIS3Q99687 375 aa21.47■■□□□ 1.03
SCNN1A-205ENST00000396966 SEC24BO95487 1268 aa21.46■■□□□ 1.03
SCNN1A-205ENST00000396966 SIRT2Q8IXJ6 389 aa21.46■■□□□ 1.03
SCNN1A-205ENST00000396966 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
SCNN1A-205ENST00000396966 PIP4K2BP78356 416 aa21.45■■□□□ 1.02
SCNN1A-205ENST00000396966 ANKRD44Q8N8A2 993 aa21.45■■□□□ 1.02
SCNN1A-205ENST00000396966 WNK3Q9BYP7 1800 aa21.45■■□□□ 1.02
SCNN1A-205ENST00000396966 NUCB1Q02818 461 aa21.45■■□□□ 1.02
SCNN1A-205ENST00000396966 NKX1-1Q15270 411 aaPredicted RBP21.45■■□□□ 1.02
SCNN1A-205ENST00000396966 ATP10DQ9P241 1426 aa21.45■■□□□ 1.02
SCNN1A-205ENST00000396966 ERVV-2B6SEH9 535 aa21.44■■□□□ 1.02
SCNN1A-205ENST00000396966 LAMB4A4D0S4 1761 aa21.44■■□□□ 1.02
SCNN1A-205ENST00000396966 GNAI3P08754 354 aa21.44■■□□□ 1.02
SCNN1A-205ENST00000396966 DDX54Q8TDD1 881 aaKnown RBP21.44■■□□□ 1.02
SCNN1A-205ENST00000396966 BCL11AQ9H165 835 aa21.44■■□□□ 1.02
SCNN1A-205ENST00000396966 HYPKQ9NX55 129 aa21.44■■□□□ 1.02
SCNN1A-205ENST00000396966 FMNL2Q96PY5 1086 aa21.43■■□□□ 1.02
SCNN1A-205ENST00000396966 PRAMEF22A3QJZ6 481 aa21.43■■□□□ 1.02
SCNN1A-205ENST00000396966 CEP85Q6P2H3 762 aa21.43■■□□□ 1.02
SCNN1A-205ENST00000396966 UBR2Q8IWV8 1755 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms