RNA–Protein interactions for RNA: ENST00000396830.2

IFFO1-203, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-203ENST00000396830 PKD1L3Q7Z443 1732 aa22.65■■□□□ 1.22
IFFO1-203ENST00000396830 RGS3P49796 1198 aa22.65■■□□□ 1.22
IFFO1-203ENST00000396830 SKAP1Q86WV1 359 aa22.65■■□□□ 1.22
IFFO1-203ENST00000396830 IL17REQ8NFR9 667 aa22.65■■□□□ 1.22
IFFO1-203ENST00000396830 IPO9Q96P70 1041 aaKnown RBP22.65■■□□□ 1.22
IFFO1-203ENST00000396830 PARP4Q9UKK3 1724 aaKnown RBP22.64■■□□□ 1.22
IFFO1-203ENST00000396830 USP35Q9P2H5 1018 aa22.64■■□□□ 1.22
IFFO1-203ENST00000396830 SLIT2O94813 1529 aa22.64■■□□□ 1.21
IFFO1-203ENST00000396830 NWD2Q9ULI1 1742 aa22.64■■□□□ 1.21
IFFO1-203ENST00000396830 ABCC4O15439 1325 aa22.64■■□□□ 1.21
IFFO1-203ENST00000396830 OVOS2A0A0G2JMS6 1433 aa22.64■■□□□ 1.21
IFFO1-203ENST00000396830 ERICH6Q7L0X2 663 aa22.63■■□□□ 1.21
IFFO1-203ENST00000396830 BABAM1Q9NWV8 329 aa22.63■■□□□ 1.21
IFFO1-203ENST00000396830 AKAP4Q5JQC9 854 aa22.63■■□□□ 1.21
IFFO1-203ENST00000396830 ELL2O00472 640 aaPredicted RBP22.62■■□□□ 1.21
IFFO1-203ENST00000396830 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
IFFO1-203ENST00000396830 SOS1Q07889 1333 aaPredicted RBP22.62■■□□□ 1.21
IFFO1-203ENST00000396830 C8orf37Q96NL8 207 aa22.61■■□□□ 1.21
IFFO1-203ENST00000396830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.61■■□□□ 1.212e-7■■■■■ 28.3
IFFO1-203ENST00000396830 SPG7Q9UQ90 795 aa22.61■■□□□ 1.21
IFFO1-203ENST00000396830 IL2RBP14784 551 aa22.6■■□□□ 1.21
IFFO1-203ENST00000396830 C8orf34Q49A92 452 aa22.6■■□□□ 1.21
IFFO1-203ENST00000396830 C1orf141Q5JVX7 400 aa22.6■■□□□ 1.21
IFFO1-203ENST00000396830 MPRIPQ6WCQ1 1025 aa22.6■■□□□ 1.21
IFFO1-203ENST00000396830 PLEKHG2Q9H7P9 1386 aa22.59■■□□□ 1.21
IFFO1-203ENST00000396830 NGLY1Q96IV0 654 aa22.59■■□□□ 1.21
IFFO1-203ENST00000396830 PTPRCP08575 1304 aa22.59■■□□□ 1.21
IFFO1-203ENST00000396830 TSPYL4Q9UJ04 414 aa22.58■■□□□ 1.21
IFFO1-203ENST00000396830 PDZRN3Q9UPQ7 1066 aa22.58■■□□□ 1.21
IFFO1-203ENST00000396830 SHANK3Q9BYB0 1731 aa22.58■■□□□ 1.21
IFFO1-203ENST00000396830 CEMIPQ8WUJ3 1361 aa22.58■■□□□ 1.21
IFFO1-203ENST00000396830 ZBTB7BO15156 539 aaPredicted RBP22.58■■□□□ 1.2
IFFO1-203ENST00000396830 CYP27B1O15528 508 aa22.58■■□□□ 1.2
IFFO1-203ENST00000396830 MIS18AQ9NYP9 233 aa22.58■■□□□ 1.2
IFFO1-203ENST00000396830 ADAMTS7Q9UKP4 1686 aa22.57■■□□□ 1.2
IFFO1-203ENST00000396830 RNMTO43148 476 aaKnown RBP22.57■■□□□ 1.2
IFFO1-203ENST00000396830 PHKG2P15735 406 aa22.57■■□□□ 1.2
IFFO1-203ENST00000396830 WNK3Q9BYP7 1800 aa22.57■■□□□ 1.2
IFFO1-203ENST00000396830 DISP2A7MBM2 1401 aa22.57■■□□□ 1.2
IFFO1-203ENST00000396830 SMC5Q8IY18 1101 aa22.56■■□□□ 1.2
IFFO1-203ENST00000396830 ZCRB1Q8TBF4 217 aaKnown RBP22.56■■□□□ 1.2
IFFO1-203ENST00000396830 NOP58Q9Y2X3 529 aaKnown RBP22.56■■□□□ 1.2
IFFO1-203ENST00000396830 BCL9LQ86UU0 1499 aa22.56■■□□□ 1.2
IFFO1-203ENST00000396830 DDRGK1Q96HY6 314 aa22.55■■□□□ 1.2
IFFO1-203ENST00000396830 SPATA31A1Q5TZJ5 1347 aa22.55■■□□□ 1.2
IFFO1-203ENST00000396830 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
IFFO1-203ENST00000396830 UNC5CLQ8IV45 518 aa22.55■■□□□ 1.2
IFFO1-203ENST00000396830 IFNL2Q8IZJ0 200 aa22.54■■□□□ 1.2
IFFO1-203ENST00000396830 FNBP4Q8N3X1 1017 aaPredicted RBP22.54■■□□□ 1.2
IFFO1-203ENST00000396830 INTS3Q68E01 1043 aaKnown RBP22.53■■□□□ 1.2
IFFO1-203ENST00000396830 ZBTB47Q9UFB7 747 aaPredicted RBP22.53■■□□□ 1.2
IFFO1-203ENST00000396830 SPATA31A5Q5VU36 1347 aa22.53■■□□□ 1.2
IFFO1-203ENST00000396830 SPATA31A7Q8IWB4 1347 aa22.53■■□□□ 1.2
IFFO1-203ENST00000396830 KDM6AO15550 1401 aaPredicted RBP22.53■■□□□ 1.2
IFFO1-203ENST00000396830 CACNA1FO60840 1977 aa22.53■■□□□ 1.2
IFFO1-203ENST00000396830 TAF7Q15545 349 aaPredicted RBP22.52■■□□□ 1.2
IFFO1-203ENST00000396830 MEX3CQ5U5Q3 659 aaKnown RBP22.52■■□□□ 1.2
IFFO1-203ENST00000396830 NPM2Q86SE8 214 aaKnown RBP22.52■■□□□ 1.2
IFFO1-203ENST00000396830 SIPA1L3O60292 1781 aaPredicted RBP22.52■■□□□ 1.2
IFFO1-203ENST00000396830 PCDH11XQ9BZA7 1347 aa22.51■■□□□ 1.19
IFFO1-203ENST00000396830 PCDH11YQ9BZA8 1340 aa22.51■■□□□ 1.19
IFFO1-203ENST00000396830 KRT24Q2M2I5 525 aa22.5■■□□□ 1.19
IFFO1-203ENST00000396830 GCC1Q96CN9 775 aa22.5■■□□□ 1.19
IFFO1-203ENST00000396830 CCDC9Q9Y3X0 531 aaKnown RBP22.5■■□□□ 1.19
IFFO1-203ENST00000396830 DDX54Q8TDD1 881 aaKnown RBP22.5■■□□□ 1.19
IFFO1-203ENST00000396830 CHMP4AQ9BY43 222 aa22.5■■□□□ 1.19
IFFO1-203ENST00000396830 TEFQ10587 303 aa22.49■■□□□ 1.19
IFFO1-203ENST00000396830 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.49■■□□□ 1.19
IFFO1-203ENST00000396830 VPS72Q15906 364 aa22.48■■□□□ 1.19
IFFO1-203ENST00000396830 USP21Q9UK80 565 aa22.48■■□□□ 1.19
IFFO1-203ENST00000396830 RGS12O14924 1447 aa22.48■■□□□ 1.19
IFFO1-203ENST00000396830 KDM3BQ7LBC6 1761 aa22.48■■□□□ 1.19
IFFO1-203ENST00000396830 THRAP3Q9Y2W1 955 aaKnown RBP22.48■■□□□ 1.19
IFFO1-203ENST00000396830 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
IFFO1-203ENST00000396830 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
IFFO1-203ENST00000396830 STK31Q9BXU1 1019 aa22.47■■□□□ 1.19
IFFO1-203ENST00000396830 SLC4A2P04920 1241 aa22.46■■□□□ 1.19
IFFO1-203ENST00000396830 AFF2P51816 1311 aa22.46■■□□□ 1.19
IFFO1-203ENST00000396830 HSP90AB1P08238 724 aaKnown RBP22.45■■□□□ 1.19
IFFO1-203ENST00000396830 NUCB1Q02818 461 aa22.45■■□□□ 1.19
IFFO1-203ENST00000396830 KCNQ3O43525 872 aa22.45■■□□□ 1.18
IFFO1-203ENST00000396830 NKX1-1Q15270 411 aaPredicted RBP22.45■■□□□ 1.18
IFFO1-203ENST00000396830 BARGINQ6ZT62 677 aa22.44■■□□□ 1.18
IFFO1-203ENST00000396830 SLC52A2Q9HAB3 445 aa22.44■■□□□ 1.18
IFFO1-203ENST00000396830 MRC1P22897 1456 aa22.44■■□□□ 1.18
IFFO1-203ENST00000396830 BTBD11A6QL63 1104 aa22.43■■□□□ 1.18
IFFO1-203ENST00000396830 CDCA7Q9BWT1 371 aaPredicted RBP22.43■■□□□ 1.18
IFFO1-203ENST00000396830 TOGARAM1Q9Y4F4 1720 aa22.43■■□□□ 1.18
IFFO1-203ENST00000396830 EXOC5O00471 708 aa22.43■■□□□ 1.18
IFFO1-203ENST00000396830 NFATC2IPQ8NCF5 419 aa22.43■■□□□ 1.18
IFFO1-203ENST00000396830 TNS2Q63HR2 1409 aa22.42■■□□□ 1.18
IFFO1-203ENST00000396830 CCT4P50991 539 aaKnown RBP22.42■■□□□ 1.18
IFFO1-203ENST00000396830 HOXB7P09629 217 aa22.41■■□□□ 1.18
IFFO1-203ENST00000396830 FAM98CQ17RN3 349 aaKnown RBP22.41■■□□□ 1.18
IFFO1-203ENST00000396830 CHD1LQ86WJ1 897 aa22.4■■□□□ 1.18
IFFO1-203ENST00000396830 RPAP2Q8IXW5 612 aaPredicted RBP22.4■■□□□ 1.18
IFFO1-203ENST00000396830 N4BP2Q86UW6 1770 aaPredicted RBP22.4■■□□□ 1.18
IFFO1-203ENST00000396830 UPF2Q9HAU5 1272 aaKnown RBP22.4■■□□□ 1.18
IFFO1-203ENST00000396830 CABP4P57796 275 aa22.39■■□□□ 1.17
IFFO1-203ENST00000396830 EIF4A1P60842 406 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms