RNA–Protein interactions for RNA: ENST00000395936.5

PMP22-202, Transcript of peripheral myelin protein 22, humanhuman

TSL 3 BASIC

Gene PMP22, Length 816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-202ENST00000395936 ITPK1Q13572 414 aa23.11■■□□□ 1.29
PMP22-202ENST00000395936 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
PMP22-202ENST00000395936 PHF14O94880 888 aa23.1■■□□□ 1.29
PMP22-202ENST00000395936 AMER1Q5JTC6 1135 aaPredicted RBP23.09■■□□□ 1.29
PMP22-202ENST00000395936 SMIM5Q71RC9 77 aa23.09■■□□□ 1.29
PMP22-202ENST00000395936 GRIN3BO60391 1043 aa23.08■■□□□ 1.29
PMP22-202ENST00000395936 ZNF530Q6P9A1 599 aaPredicted RBP23.08■■□□□ 1.29
PMP22-202ENST00000395936 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.28
PMP22-202ENST00000395936 GNPATO15228 680 aa23.07■■□□□ 1.28
PMP22-202ENST00000395936 YBX3P16989 372 aaKnown RBP eCLIP23.07■■□□□ 1.28
PMP22-202ENST00000395936 IL13P35225 146 aa23.07■■□□□ 1.28
PMP22-202ENST00000395936 AEBP1Q8IUX7 1158 aa23.07■■□□□ 1.28
PMP22-202ENST00000395936 KDRP35968 1356 aa23.06■■□□□ 1.28
PMP22-202ENST00000395936 SULT6B1Q6IMI4 303 aa23.06■■□□□ 1.28
PMP22-202ENST00000395936 MTHFSP49914 203 aa23.05■■□□□ 1.28
PMP22-202ENST00000395936 CABP4P57796 275 aa23.05■■□□□ 1.28
PMP22-202ENST00000395936 SLC4A9Q96Q91 983 aa23.05■■□□□ 1.28
PMP22-202ENST00000395936 ZNF831Q5JPB2 1677 aa23.05■■□□□ 1.28
PMP22-202ENST00000395936 KDM6AO15550 1401 aaPredicted RBP23.05■■□□□ 1.28
PMP22-202ENST00000395936 C1orf141Q5JVX7 400 aa23.04■■□□□ 1.28
PMP22-202ENST00000395936 PER1O15534 1290 aaPredicted RBP23.03■■□□□ 1.28
PMP22-202ENST00000395936 RC3H1Q5TC82 1133 aaKnown RBP23.03■■□□□ 1.28
PMP22-202ENST00000395936 RBM42Q9BTD8 480 aaKnown RBP23.03■■□□□ 1.28
PMP22-202ENST00000395936 RTCBQ9Y3I0 505 aaKnown RBP23.02■■□□□ 1.28
PMP22-202ENST00000395936 GOLGB1Q14789 3259 aaKnown RBP23.02■■□□□ 1.28
PMP22-202ENST00000395936 TRAPPC3LQ5T215 181 aa23.01■■□□□ 1.27
PMP22-202ENST00000395936 NFATC2IPQ8NCF5 419 aa23■■□□□ 1.27
PMP22-202ENST00000395936 ADRA2BP18089 450 aa22.99■■□□□ 1.27
PMP22-202ENST00000395936 CNTNAP4Q9C0A0 1308 aa22.99■■□□□ 1.27
PMP22-202ENST00000395936 COL5A3P25940 1745 aaPredicted RBP22.97■■□□□ 1.27
PMP22-202ENST00000395936 RPS6KA4O75676 772 aa22.97■■□□□ 1.27
PMP22-202ENST00000395936 AKAP4Q5JQC9 854 aa22.97■■□□□ 1.27
PMP22-202ENST00000395936 NLGN1Q8N2Q7 840 aa22.96■■□□□ 1.27
PMP22-202ENST00000395936 ARHGEF1Q92888 912 aaKnown RBP22.96■■□□□ 1.27
PMP22-202ENST00000395936 MMP10P09238 476 aa22.95■■□□□ 1.26
PMP22-202ENST00000395936 PTCD1O75127 700 aaKnown RBP22.94■■□□□ 1.26
PMP22-202ENST00000395936 C1QTNF8P60827 252 aa22.94■■□□□ 1.26
PMP22-202ENST00000395936 CC2D1BQ5T0F9 858 aaKnown RBP22.94■■□□□ 1.26
PMP22-202ENST00000395936 SCN11AQ9UI33 1791 aa22.94■■□□□ 1.26
PMP22-202ENST00000395936 RFC4P35249 363 aa22.93■■□□□ 1.26
PMP22-202ENST00000395936 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
PMP22-202ENST00000395936 NPC1L1Q9UHC9 1359 aa22.91■■□□□ 1.26
PMP22-202ENST00000395936 MYH14Q7Z406 1995 aaKnown RBP22.91■■□□□ 1.26
PMP22-202ENST00000395936 HMOX1P09601 288 aa22.91■■□□□ 1.26
PMP22-202ENST00000395936 GYS1P13807 737 aa22.91■■□□□ 1.26
PMP22-202ENST00000395936 SLC52A2Q9HAB3 445 aa22.91■■□□□ 1.26
PMP22-202ENST00000395936 LGR6Q9HBX8 967 aa22.91■■□□□ 1.26
PMP22-202ENST00000395936 CRKLP46109 303 aaKnown RBP22.9■■□□□ 1.26
PMP22-202ENST00000395936 RNMTO43148 476 aaKnown RBP22.89■■□□□ 1.25
PMP22-202ENST00000395936 GIGYF1O75420 1035 aaPredicted RBP22.89■■□□□ 1.25
PMP22-202ENST00000395936 TGFB2P61812 414 aa22.89■■□□□ 1.25
PMP22-202ENST00000395936 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
PMP22-202ENST00000395936 MTHFSDQ2M296 383 aaKnown RBP22.88■■□□□ 1.25
PMP22-202ENST00000395936 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
PMP22-202ENST00000395936 WWC3Q9ULE0 1092 aa22.86■■□□□ 1.25
PMP22-202ENST00000395936 PARP3Q9Y6F1 533 aa22.86■■□□□ 1.25
PMP22-202ENST00000395936 MRC1P22897 1456 aa22.85■■□□□ 1.25
PMP22-202ENST00000395936 TJP1Q07157 1748 aa22.85■■□□□ 1.25
PMP22-202ENST00000395936 INTS5Q6P9B9 1019 aaKnown RBP22.85■■□□□ 1.25
PMP22-202ENST00000395936 CCDC87Q9NVE4 849 aa22.85■■□□□ 1.25
PMP22-202ENST00000395936 C4AP0C0L4 1744 aa22.85■■□□□ 1.25
PMP22-202ENST00000395936 PXDNLA1KZ92 1463 aa22.85■■□□□ 1.25
PMP22-202ENST00000395936 C10orf71Q711Q0 1435 aa22.84■■□□□ 1.25
PMP22-202ENST00000395936 ATP10DQ9P241 1426 aa22.84■■□□□ 1.25
PMP22-202ENST00000395936 DNAJC10Q8IXB1 793 aa22.83■■□□□ 1.25
PMP22-202ENST00000395936 ADCY9O60503 1353 aa22.83■■□□□ 1.25
PMP22-202ENST00000395936 ADAMTS7Q9UKP4 1686 aa22.83■■□□□ 1.24
PMP22-202ENST00000395936 USP42Q9H9J4 1324 aaKnown RBP22.82■■□□□ 1.24
PMP22-202ENST00000395936 KIAA1551Q9HCM1 1747 aa22.82■■□□□ 1.24
PMP22-202ENST00000395936 COL3A1P02461 1466 aaPredicted RBP22.82■■□□□ 1.24
PMP22-202ENST00000395936 SLC39A6Q13433 755 aa22.82■■□□□ 1.24
PMP22-202ENST00000395936 VIRMAQ69YN4 1812 aaKnown RBP22.82■■□□□ 1.24
PMP22-202ENST00000395936 SENP3-EIF4A1A0A087X0R7 540 aa22.81■■□□□ 1.24
PMP22-202ENST00000395936 A0A0G2JLW4 131 aa22.81■■□□□ 1.24
PMP22-202ENST00000395936 SRP68Q9UHB9 627 aaKnown RBP22.81■■□□□ 1.24
PMP22-202ENST00000395936 CYP19A1P11511 503 aaPredicted RBP22.8■■□□□ 1.24
PMP22-202ENST00000395936 FKBP8Q14318 412 aa22.8■■□□□ 1.24
PMP22-202ENST00000395936 VSIG10Q8N0Z9 540 aa22.8■■□□□ 1.24
PMP22-202ENST00000395936 GPBP1L1Q9HC44 474 aaPredicted RBP22.8■■□□□ 1.24
PMP22-202ENST00000395936 N4BP2Q86UW6 1770 aaPredicted RBP22.8■■□□□ 1.24
PMP22-202ENST00000395936 U2SURPO15042 1029 aaKnown RBP22.79■■□□□ 1.24
PMP22-202ENST00000395936 DPEP1P16444 411 aa22.79■■□□□ 1.24
PMP22-202ENST00000395936 CNGB1Q14028 1251 aaPredicted RBP22.79■■□□□ 1.24
PMP22-202ENST00000395936 KCPQ6ZWJ8 1503 aa22.78■■□□□ 1.24
PMP22-202ENST00000395936 BCS1LQ9Y276 419 aa22.78■■□□□ 1.24
PMP22-202ENST00000395936 SOS1Q07889 1333 aaPredicted RBP22.78■■□□□ 1.24
PMP22-202ENST00000395936 ZPR1O75312 459 aa22.77■■□□□ 1.24
PMP22-202ENST00000395936 TM4SF1P30408 202 aa22.77■■□□□ 1.24
PMP22-202ENST00000395936 KCNA3P22001 575 aa22.76■■□□□ 1.23
PMP22-202ENST00000395936 DDR1Q08345 913 aa22.76■■□□□ 1.23
PMP22-202ENST00000395936 GAS2L2Q8NHY3 880 aa22.76■■□□□ 1.23
PMP22-202ENST00000395936 GNAT3A8MTJ3 354 aa22.75■■□□□ 1.23
PMP22-202ENST00000395936 USPL1Q5W0Q7 1092 aa22.74■■□□□ 1.23
PMP22-202ENST00000395936 IL17REQ8NFR9 667 aa22.74■■□□□ 1.23
PMP22-202ENST00000395936 NARFQ9UHQ1 456 aa22.74■■□□□ 1.23
PMP22-202ENST00000395936 BRCA1P38398 1863 aaKnown RBP22.73■■□□□ 1.23
PMP22-202ENST00000395936 POLRMTO00411 1230 aaKnown RBP22.73■■□□□ 1.23
PMP22-202ENST00000395936 FCHSD2O94868 740 aa22.73■■□□□ 1.23
PMP22-202ENST00000395936 TTC5Q8N0Z6 440 aa22.73■■□□□ 1.23
PMP22-202ENST00000395936 ZNF526Q8TF50 670 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms