RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 AK9Q5TCS8 1911 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 TRIM66O15016 1216 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 ADCY5O95622 1261 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 ATP2B1P20020 1258 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 RNF217Q8TC41 542 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 DEF6Q9H4E7 631 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 CWC15Q9P013 229 aaKnown RBP11.63□□□□□ -0.55
CDRT1-204ENST00000395906 TEX35Q5T0J7 233 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 SYAP1Q96A49 352 aaPredicted RBP11.62□□□□□ -0.55
CDRT1-204ENST00000395906 ST7Q9NRC1 585 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 ATG3Q9NT62 314 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 SUFUQ9UMX1 484 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 PAXBP1Q9Y5B6 917 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 PIK3C2GO75747 1445 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 TMEM131LA2VDJ0 1609 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 RBM6P78332 1123 aaKnown RBP11.62□□□□□ -0.55
CDRT1-204ENST00000395906 RPGRIP1LQ68CZ1 1315 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 USP25Q9UHP3 1055 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 PYCARDQ9ULZ3 195 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 SH3BP1Q9Y3L3 701 aa11.62□□□□□ -0.55
CDRT1-204ENST00000395906 NEXMIFQ5QGS0 1516 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 A2ML1A8K2U0 1454 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 CLSTN1O94985 981 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 GSCP56915 257 aaPredicted RBP11.61□□□□□ -0.55
CDRT1-204ENST00000395906 TMF1P82094 1093 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 CCDC112Q8NEF3 446 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 RBM28Q9NW13 759 aaKnown RBP11.61□□□□□ -0.55
CDRT1-204ENST00000395906 PER1O15534 1290 aaPredicted RBP11.61□□□□□ -0.55
CDRT1-204ENST00000395906 ZNF853P0CG23 659 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 BMS1Q14692 1282 aaKnown RBP11.61□□□□□ -0.55
CDRT1-204ENST00000395906 NOM1Q5C9Z4 860 aaKnown RBP11.61□□□□□ -0.55
CDRT1-204ENST00000395906 KRBA2Q6ZNG9 492 aa11.61□□□□□ -0.55
CDRT1-204ENST00000395906 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
CDRT1-204ENST00000395906 PPLO60437 1756 aa11.6□□□□□ -0.55
CDRT1-204ENST00000395906 NAA30Q147X3 362 aaPredicted RBP11.6□□□□□ -0.55
CDRT1-204ENST00000395906 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
CDRT1-204ENST00000395906 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
CDRT1-204ENST00000395906 TTC31Q49AM3 519 aaPredicted RBP11.6□□□□□ -0.55
CDRT1-204ENST00000395906 TXNDC2Q86VQ3 553 aa11.6□□□□□ -0.55
CDRT1-204ENST00000395906 CWC22Q9HCG8 908 aaKnown RBP11.6□□□□□ -0.55
CDRT1-204ENST00000395906 RIMS2Q9UQ26 1411 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 SPATA31D1Q6ZQQ2 1576 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 SEMA3FQ13275 785 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 SGSM3Q96HU1 749 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 KCNF1Q9H3M0 494 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 LCMT1Q9UIC8 334 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 MYOM2P54296 1465 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 SCAF11Q99590 1463 aaKnown RBP11.59□□□□□ -0.55
CDRT1-204ENST00000395906 CCDC189A1A4V9 331 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 SRLQ86TD4 932 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 CCDC191Q8NCU4 936 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 FBXO41Q8TF61 875 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 PRAM1Q96QH2 718 aa11.59□□□□□ -0.55
CDRT1-204ENST00000395906 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
CDRT1-204ENST00000395906 IFT172Q9UG01 1749 aa11.58□□□□□ -0.56
CDRT1-204ENST00000395906 MINK1Q8N4C8 1332 aaPredicted RBP11.58□□□□□ -0.56
CDRT1-204ENST00000395906 DNAJC21Q5F1R6 531 aaKnown RBP11.58□□□□□ -0.56
CDRT1-204ENST00000395906 SWT1Q5T5J6 900 aaKnown RBP11.58□□□□□ -0.56
CDRT1-204ENST00000395906 NEK11Q8NG66 645 aa11.58□□□□□ -0.56
CDRT1-204ENST00000395906 SART3Q15020 963 aaKnown RBP11.58□□□□□ -0.56
CDRT1-204ENST00000395906 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
CDRT1-204ENST00000395906 FBXO38Q6PIJ6 1188 aa11.57□□□□□ -0.56
CDRT1-204ENST00000395906 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
CDRT1-204ENST00000395906 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
CDRT1-204ENST00000395906 RRP15Q9Y3B9 282 aaKnown RBP11.57□□□□□ -0.56
CDRT1-204ENST00000395906 ZSCAN26Q16670 478 aa11.57□□□□□ -0.56
CDRT1-204ENST00000395906 LRRFIP2Q9Y608 721 aaKnown RBP11.57□□□□□ -0.56
CDRT1-204ENST00000395906 FER1L4A9Z1Z3 1794 aa11.57□□□□□ -0.56
CDRT1-204ENST00000395906 CALRP27797 417 aaKnown RBP11.56□□□□□ -0.56
CDRT1-204ENST00000395906 TPM4P67936 248 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 GPS2Q13227 327 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 SUGP1Q8IWZ8 645 aaKnown RBP11.56□□□□□ -0.56
CDRT1-204ENST00000395906 METP08581 1390 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 C3P01024 1663 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 PPP1R12AO14974 1030 aaPredicted RBP11.56□□□□□ -0.56
CDRT1-204ENST00000395906 KDM4AO75164 1064 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 ATP6V1AP38606 617 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 RNF20Q5VTR2 975 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 LRCH2Q5VUJ6 765 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 NBPF11Q86T75 865 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 SLC12A5Q9H2X9 1139 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 PLEKHG2Q9H7P9 1386 aa11.56□□□□□ -0.56
CDRT1-204ENST00000395906 LMTK3Q96Q04 1460 aa11.55□□□□□ -0.56
CDRT1-204ENST00000395906 TNNT1P13805 278 aa11.55□□□□□ -0.56
CDRT1-204ENST00000395906 MAGEA9P43362 315 aa11.55□□□□□ -0.56
CDRT1-204ENST00000395906 NBPF9Q3BBW0 867 aa11.55□□□□□ -0.56
CDRT1-204ENST00000395906 PACS2Q86VP3 889 aa11.55□□□□□ -0.56
CDRT1-204ENST00000395906 TMEM2Q9UHN6 1383 aa11.55□□□□□ -0.56
CDRT1-204ENST00000395906 HTATSF1O43719 755 aaKnown RBP11.55□□□□□ -0.56
CDRT1-204ENST00000395906 TRDNQ13061 729 aa11.55□□□□□ -0.56
CDRT1-204ENST00000395906 PKP1Q13835 747 aa11.55□□□□□ -0.56
CDRT1-204ENST00000395906 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
CDRT1-204ENST00000395906 PTPRCP08575 1304 aa11.54□□□□□ -0.56
CDRT1-204ENST00000395906 RABEP1Q15276 862 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms