RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 FCHSD2O94868 740 aa19.58■□□□□ 0.72
VCPKMT-201ENST00000395859 RAPGEF4Q8WZA2 1011 aa19.58■□□□□ 0.72
VCPKMT-201ENST00000395859 C4AP0C0L4 1744 aa19.58■□□□□ 0.72
VCPKMT-201ENST00000395859 AMPHP49418 695 aa19.57■□□□□ 0.72
VCPKMT-201ENST00000395859 NKX1-1Q15270 411 aaPredicted RBP19.57■□□□□ 0.72
VCPKMT-201ENST00000395859 TMC1Q8TDI8 760 aa19.57■□□□□ 0.72
VCPKMT-201ENST00000395859 DCAF5Q96JK2 942 aa19.57■□□□□ 0.72
VCPKMT-201ENST00000395859 GNPATO15228 680 aa19.56■□□□□ 0.72
VCPKMT-201ENST00000395859 TATP17735 454 aaPredicted RBP19.56■□□□□ 0.72
VCPKMT-201ENST00000395859 TERF2IPQ9NYB0 399 aa19.56■□□□□ 0.72
VCPKMT-201ENST00000395859 NLGN1Q8N2Q7 840 aa19.54■□□□□ 0.72
VCPKMT-201ENST00000395859 COG3Q96JB2 828 aa19.54■□□□□ 0.72
VCPKMT-201ENST00000395859 PUS7Q96PZ0 661 aaKnown RBP19.54■□□□□ 0.72
VCPKMT-201ENST00000395859 KDM6AO15550 1401 aaPredicted RBP19.53■□□□□ 0.72
VCPKMT-201ENST00000395859 RNF181Q9P0P0 153 aa19.53■□□□□ 0.72
VCPKMT-201ENST00000395859 NCAPD2Q15021 1401 aa19.52■□□□□ 0.72
VCPKMT-201ENST00000395859 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
VCPKMT-201ENST00000395859 TMF1P82094 1093 aa19.51■□□□□ 0.71
VCPKMT-201ENST00000395859 RRS1Q15050 365 aaKnown RBP19.51■□□□□ 0.71
VCPKMT-201ENST00000395859 KDRP35968 1356 aa19.51■□□□□ 0.71
VCPKMT-201ENST00000395859 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
VCPKMT-201ENST00000395859 INSRP06213 1382 aa19.5■□□□□ 0.71
VCPKMT-201ENST00000395859 GYS1P13807 737 aa19.5■□□□□ 0.71
VCPKMT-201ENST00000395859 PIM2Q9P1W9 311 aa19.5■□□□□ 0.71
VCPKMT-201ENST00000395859 PCDH10Q9P2E7 1040 aa19.5■□□□□ 0.71
VCPKMT-201ENST00000395859 ASAP1Q9ULH1 1129 aa19.5■□□□□ 0.71
VCPKMT-201ENST00000395859 ZNF831Q5JPB2 1677 aa19.49■□□□□ 0.71
VCPKMT-201ENST00000395859 SMG6Q86US8 1419 aaKnown RBP19.49■□□□□ 0.71
VCPKMT-201ENST00000395859 ATP6V1AP38606 617 aa19.48■□□□□ 0.71
VCPKMT-201ENST00000395859 TRAPPC3LQ5T215 181 aa19.48■□□□□ 0.71
VCPKMT-201ENST00000395859 SLC4A9Q96Q91 983 aa19.48■□□□□ 0.71
VCPKMT-201ENST00000395859 ADRA2BP18089 450 aa19.47■□□□□ 0.71
VCPKMT-201ENST00000395859 HSP90AB2PQ58FF8 381 aa19.47■□□□□ 0.71
VCPKMT-201ENST00000395859 DALRD3Q5D0E6 543 aaKnown RBP19.47■□□□□ 0.71
VCPKMT-201ENST00000395859 ARHGEF1Q92888 912 aaKnown RBP19.47■□□□□ 0.71
VCPKMT-201ENST00000395859 COL5A3P25940 1745 aaPredicted RBP19.46■□□□□ 0.71
VCPKMT-201ENST00000395859 ATG3Q9NT62 314 aa19.46■□□□□ 0.71
VCPKMT-201ENST00000395859 RTCBQ9Y3I0 505 aaKnown RBP19.46■□□□□ 0.71
VCPKMT-201ENST00000395859 VEGFAP15692 232 aaPredicted RBP19.45■□□□□ 0.7
VCPKMT-201ENST00000395859 RC3H1Q5TC82 1133 aaKnown RBP19.45■□□□□ 0.7
VCPKMT-201ENST00000395859 PRDM10Q9NQV6 1147 aa19.45■□□□□ 0.7
VCPKMT-201ENST00000395859 GLTPD2A6NH11 291 aa19.44■□□□□ 0.7
VCPKMT-201ENST00000395859 POTECB2RU33 542 aa19.44■□□□□ 0.7
VCPKMT-201ENST00000395859 PARP3Q9Y6F1 533 aa19.44■□□□□ 0.7
VCPKMT-201ENST00000395859 MYH14Q7Z406 1995 aaKnown RBP19.44■□□□□ 0.7
VCPKMT-201ENST00000395859 KIF24Q5T7B8 1368 aa19.44■□□□□ 0.7
VCPKMT-201ENST00000395859 FOXN1O15353 648 aa19.43■□□□□ 0.7
VCPKMT-201ENST00000395859 TMOD3Q9NYL9 352 aa19.43■□□□□ 0.7
VCPKMT-201ENST00000395859 FLT4P35916 1363 aa19.43■□□□□ 0.7
VCPKMT-201ENST00000395859 FYB1O15117 783 aa19.42■□□□□ 0.7
VCPKMT-201ENST00000395859 CNTNAP4Q9C0A0 1308 aa19.42■□□□□ 0.7
VCPKMT-201ENST00000395859 RPS6KA4O75676 772 aa19.41■□□□□ 0.7
VCPKMT-201ENST00000395859 DDR1Q08345 913 aa19.41■□□□□ 0.7
VCPKMT-201ENST00000395859 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
VCPKMT-201ENST00000395859 CHRNA5P30532 468 aa19.4■□□□□ 0.7
VCPKMT-201ENST00000395859 RASSF7Q02833 373 aa19.4■□□□□ 0.7
VCPKMT-201ENST00000395859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.7
VCPKMT-201ENST00000395859 CREBZFQ9NS37 354 aa19.39■□□□□ 0.69
VCPKMT-201ENST00000395859 RFC4P35249 363 aa19.38■□□□□ 0.69
VCPKMT-201ENST00000395859 TIAM2Q8IVF5 1701 aa19.37■□□□□ 0.69
VCPKMT-201ENST00000395859 PHKG2P15735 406 aa19.37■□□□□ 0.69
VCPKMT-201ENST00000395859 LMNB1P20700 586 aa19.37■□□□□ 0.69
VCPKMT-201ENST00000395859 TESK2Q96S53 571 aa19.37■□□□□ 0.69
VCPKMT-201ENST00000395859 SIN3AQ96ST3 1273 aa19.37■□□□□ 0.69
VCPKMT-201ENST00000395859 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
VCPKMT-201ENST00000395859 SPG7Q9UQ90 795 aa19.37■□□□□ 0.69
VCPKMT-201ENST00000395859 ADAMTS7Q9UKP4 1686 aa19.36■□□□□ 0.69
VCPKMT-201ENST00000395859 FKBP8Q14318 412 aa19.36■□□□□ 0.69
VCPKMT-201ENST00000395859 FAM161AQ3B820 660 aa19.36■□□□□ 0.69
VCPKMT-201ENST00000395859 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
VCPKMT-201ENST00000395859 CNTNAP1P78357 1384 aa19.35■□□□□ 0.69
VCPKMT-201ENST00000395859 MKRN1Q9UHC7 482 aaKnown RBP19.35■□□□□ 0.69
VCPKMT-201ENST00000395859 USP42Q9H9J4 1324 aaKnown RBP19.34■□□□□ 0.69
VCPKMT-201ENST00000395859 POLRMTO00411 1230 aaKnown RBP19.34■□□□□ 0.69
VCPKMT-201ENST00000395859 TM4SF1P30408 202 aa19.34■□□□□ 0.69
VCPKMT-201ENST00000395859 CCDC88AQ3V6T2 1871 aa19.33■□□□□ 0.69
VCPKMT-201ENST00000395859 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
VCPKMT-201ENST00000395859 SRP68Q9UHB9 627 aaKnown RBP19.33■□□□□ 0.68
VCPKMT-201ENST00000395859 DLEC1Q9Y238 1755 aa19.33■□□□□ 0.68
VCPKMT-201ENST00000395859 ANKRD26Q9UPS8 1709 aa19.33■□□□□ 0.68
VCPKMT-201ENST00000395859 CTCFP49711 727 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-201ENST00000395859 NRXN2Q9P2S2 1712 aa19.31■□□□□ 0.68
VCPKMT-201ENST00000395859 TNRC18O15417 2968 aaPredicted RBP19.31■□□□□ 0.68
VCPKMT-201ENST00000395859 VIRMAQ69YN4 1812 aaKnown RBP19.31■□□□□ 0.68
VCPKMT-201ENST00000395859 NFKBIEO00221 500 aa19.31■□□□□ 0.68
VCPKMT-201ENST00000395859 RGS19P49795 217 aa19.31■□□□□ 0.68
VCPKMT-201ENST00000395859 PASKQ96RG2 1323 aa19.3■□□□□ 0.68
VCPKMT-201ENST00000395859 ABHD8Q96I13 439 aa19.3■□□□□ 0.68
VCPKMT-201ENST00000395859 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
VCPKMT-201ENST00000395859 ERVV-2B6SEH9 535 aa19.29■□□□□ 0.68
VCPKMT-201ENST00000395859 CHADLQ6NUI6 762 aa19.29■□□□□ 0.68
VCPKMT-201ENST00000395859 EYA1Q99502 592 aa19.29■□□□□ 0.68
VCPKMT-201ENST00000395859 WBP1LQ9NX94 342 aa19.29■□□□□ 0.68
VCPKMT-201ENST00000395859 AFDNP55196 1824 aaKnown RBP19.28■□□□□ 0.68
VCPKMT-201ENST00000395859 KIF20BQ96Q89 1820 aa19.28■□□□□ 0.68
VCPKMT-201ENST00000395859 POTEIP0CG38 1075 aa19.28■□□□□ 0.68
VCPKMT-201ENST00000395859 POTEJP0CG39 1038 aa19.28■□□□□ 0.68
VCPKMT-201ENST00000395859 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
VCPKMT-201ENST00000395859 DICER1Q9UPY3 1922 aaKnown RBP19.27■□□□□ 0.68
VCPKMT-201ENST00000395859 WASHC2AQ641Q2 1341 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms