RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 RPAP2Q8IXW5 612 aaPredicted RBP22.28■■□□□ 1.16
SREBF1-204ENST00000395756 TMEM94Q12767 1356 aa22.27■■□□□ 1.16
SREBF1-204ENST00000395756 FRAT2O75474 233 aaPredicted RBP22.27■■□□□ 1.16
SREBF1-204ENST00000395756 CSB-PGBD3P0DP91 1061 aa22.26■■□□□ 1.15
SREBF1-204ENST00000395756 BMP2KLQ5H9B9 411 aa22.26■■□□□ 1.15
SREBF1-204ENST00000395756 CCT4P50991 539 aaKnown RBP22.26■■□□□ 1.15
SREBF1-204ENST00000395756 PLEKHM2Q8IWE5 1019 aa22.26■■□□□ 1.15
SREBF1-204ENST00000395756 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
SREBF1-204ENST00000395756 TSHZ3Q63HK5 1081 aa22.25■■□□□ 1.15
SREBF1-204ENST00000395756 TBC1D9Q6ZT07 1266 aa22.25■■□□□ 1.15
SREBF1-204ENST00000395756 CHPF2Q9P2E5 772 aa22.25■■□□□ 1.15
SREBF1-204ENST00000395756 PRAMEF22A3QJZ6 481 aa22.24■■□□□ 1.15
SREBF1-204ENST00000395756 GSPT1P15170 499 aaKnown RBP22.24■■□□□ 1.15
SREBF1-204ENST00000395756 GNAI2P04899 355 aa22.23■■□□□ 1.15
SREBF1-204ENST00000395756 EIF4A1P60842 406 aaKnown RBP22.23■■□□□ 1.15
SREBF1-204ENST00000395756 AKAP4Q5JQC9 854 aa22.23■■□□□ 1.15
SREBF1-204ENST00000395756 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
SREBF1-204ENST00000395756 C1orf167Q5SNV9 1468 aa22.22■■□□□ 1.15
SREBF1-204ENST00000395756 PNMA6EA0A0J9YXQ4 647 aa22.22■■□□□ 1.15
SREBF1-204ENST00000395756 ATP10DQ9P241 1426 aa22.21■■□□□ 1.15
SREBF1-204ENST00000395756 RNMTO43148 476 aaKnown RBP22.2■■□□□ 1.14
SREBF1-204ENST00000395756 HMMRO75330 724 aa22.2■■□□□ 1.14
SREBF1-204ENST00000395756 SLC39A6Q13433 755 aa22.2■■□□□ 1.14
SREBF1-204ENST00000395756 PI4KAP2A4QPH2 592 aa22.19■■□□□ 1.14
SREBF1-204ENST00000395756 PI4KAP1Q8N8J0 262 aa22.19■■□□□ 1.14
SREBF1-204ENST00000395756 MARF1Q9Y4F3 1742 aaKnown RBP22.19■■□□□ 1.14
SREBF1-204ENST00000395756 NFAT5O94916 1531 aa22.19■■□□□ 1.14
SREBF1-204ENST00000395756 RAPGEF4Q8WZA2 1011 aa22.18■■□□□ 1.14
SREBF1-204ENST00000395756 AMOTQ4VCS5 1084 aa22.18■■□□□ 1.14
SREBF1-204ENST00000395756 RBM42Q9BTD8 480 aaKnown RBP22.18■■□□□ 1.14
SREBF1-204ENST00000395756 ZNF142P52746 1687 aaPredicted RBP22.17■■□□□ 1.14
SREBF1-204ENST00000395756 AIMP1Q12904 312 aaKnown RBP22.17■■□□□ 1.14
SREBF1-204ENST00000395756 USP44Q9H0E7 712 aa22.17■■□□□ 1.14
SREBF1-204ENST00000395756 FOXD4L1Q9NU39 408 aa22.17■■□□□ 1.14
SREBF1-204ENST00000395756 UBTFL1P0CB47 393 aaPredicted RBP22.17■■□□□ 1.14
SREBF1-204ENST00000395756 LTN1O94822 1766 aa22.16■■□□□ 1.14
SREBF1-204ENST00000395756 PROSER3Q2NL68 480 aa22.16■■□□□ 1.14
SREBF1-204ENST00000395756 TTC22Q5TAA0 569 aa22.16■■□□□ 1.14
SREBF1-204ENST00000395756 CEMIPQ8WUJ3 1361 aa22.16■■□□□ 1.14
SREBF1-204ENST00000395756 GNAI3P08754 354 aa22.15■■□□□ 1.14
SREBF1-204ENST00000395756 ERBB3P21860 1342 aa22.15■■□□□ 1.14
SREBF1-204ENST00000395756 CDC45O75419 566 aa22.15■■□□□ 1.14
SREBF1-204ENST00000395756 IL1RAPL2Q9NP60 686 aa22.15■■□□□ 1.14
SREBF1-204ENST00000395756 NBPF7P0C2Y1 421 aaPredicted RBP22.14■■□□□ 1.13
SREBF1-204ENST00000395756 SDSP20132 328 aa22.14■■□□□ 1.13
SREBF1-204ENST00000395756 USP35Q9P2H5 1018 aa22.14■■□□□ 1.13
SREBF1-204ENST00000395756 PXDNQ92626 1479 aa22.14■■□□□ 1.13
SREBF1-204ENST00000395756 CADPS2Q86UW7 1296 aa22.14■■□□□ 1.13
SREBF1-204ENST00000395756 SRCIN1Q9C0H9 1055 aa22.14■■□□□ 1.13
SREBF1-204ENST00000395756 HSCBQ8IWL3 235 aa22.13■■□□□ 1.13
SREBF1-204ENST00000395756 PIP4K2AP48426 406 aaPredicted RBP22.13■■□□□ 1.13
SREBF1-204ENST00000395756 NFATC2IPQ8NCF5 419 aa22.13■■□□□ 1.13
SREBF1-204ENST00000395756 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
SREBF1-204ENST00000395756 ATP8B2P98198 1209 aa22.1■■□□□ 1.13
SREBF1-204ENST00000395756 DNAAF4Q8WXU2 420 aa22.1■■□□□ 1.13
SREBF1-204ENST00000395756 MYL6BP14649 208 aa22.1■■□□□ 1.13
SREBF1-204ENST00000395756 RGPD2P0DJD1 1756 aa22.1■■□□□ 1.13
SREBF1-204ENST00000395756 GIGYF1O75420 1035 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-204ENST00000395756 SURF6O75683 361 aaKnown RBP22.09■■□□□ 1.13
SREBF1-204ENST00000395756 PPP1R42Q7Z4L9 355 aa22.09■■□□□ 1.13
SREBF1-204ENST00000395756 LRRCC1Q9C099 1032 aa22.09■■□□□ 1.13
SREBF1-204ENST00000395756 TATP17735 454 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-204ENST00000395756 NPHP3Q7Z494 1330 aa22.09■■□□□ 1.13
SREBF1-204ENST00000395756 VIRMAQ69YN4 1812 aaKnown RBP22.09■■□□□ 1.13
SREBF1-204ENST00000395756 RBM25P49756 843 aaKnown RBP22.09■■□□□ 1.13
SREBF1-204ENST00000395756 SRGAP3O43295 1099 aa22.08■■□□□ 1.13
SREBF1-204ENST00000395756 CD2BP2O95400 341 aaKnown RBP22.08■■□□□ 1.13
SREBF1-204ENST00000395756 RILPL2Q969X0 211 aa22.08■■□□□ 1.13
SREBF1-204ENST00000395756 MAP3K2Q9Y2U5 619 aa22.08■■□□□ 1.13
SREBF1-204ENST00000395756 TRIM6-TRIM34B2RNG4 842 aa22.08■■□□□ 1.12
SREBF1-204ENST00000395756 PDE1AP54750 535 aa22.08■■□□□ 1.12
SREBF1-204ENST00000395756 CWF19L2Q2TBE0 894 aaKnown RBP22.08■■□□□ 1.12
SREBF1-204ENST00000395756 NUTM1Q86Y26 1132 aa22.08■■□□□ 1.12
SREBF1-204ENST00000395756 MST1RQ04912 1400 aa22.08■■□□□ 1.12
SREBF1-204ENST00000395756 HSP90AA1P07900 732 aaKnown RBP22.07■■□□□ 1.12
SREBF1-204ENST00000395756 ANTXR1Q9H6X2 564 aa22.07■■□□□ 1.12
SREBF1-204ENST00000395756 DBF4Q9UBU7 674 aaPredicted RBP22.07■■□□□ 1.12
SREBF1-204ENST00000395756 MAP4K4O95819 1239 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-204ENST00000395756 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
SREBF1-204ENST00000395756 VSIG10Q8N0Z9 540 aa22.06■■□□□ 1.12
SREBF1-204ENST00000395756 KIF2CQ99661 725 aa22.06■■□□□ 1.12
SREBF1-204ENST00000395756 ZMYND15Q9H091 742 aa22.06■■□□□ 1.12
SREBF1-204ENST00000395756 C9orf78Q9NZ63 289 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-204ENST00000395756 BRPF3Q9ULD4 1205 aa22.06■■□□□ 1.12
SREBF1-204ENST00000395756 BEND3Q5T5X7 828 aa22.05■■□□□ 1.12
SREBF1-204ENST00000395756 ZNF335Q9H4Z2 1342 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-204ENST00000395756 BRINP3Q76B58 766 aa22.04■■□□□ 1.12
SREBF1-204ENST00000395756 PRDM11Q9NQV5 511 aa22.03■■□□□ 1.12
SREBF1-204ENST00000395756 OS9Q13438 667 aaPredicted RBP22.03■■□□□ 1.12
SREBF1-204ENST00000395756 ZNF790Q6PG37 636 aa22.03■■□□□ 1.12
SREBF1-204ENST00000395756 JARID2Q92833 1246 aaPredicted RBP22.03■■□□□ 1.12
SREBF1-204ENST00000395756 PHKG2P15735 406 aa22.02■■□□□ 1.12
SREBF1-204ENST00000395756 MX1P20591 662 aa22.02■■□□□ 1.12
SREBF1-204ENST00000395756 CASC1Q6TDU7 716 aa22.02■■□□□ 1.12
SREBF1-204ENST00000395756 SPG7Q9UQ90 795 aa22.02■■□□□ 1.12
SREBF1-204ENST00000395756 STRN4Q9NRL3 753 aa22.02■■□□□ 1.12
SREBF1-204ENST00000395756 SOS1Q07889 1333 aaPredicted RBP22.02■■□□□ 1.11
SREBF1-204ENST00000395756 TOM1L2Q6ZVM7 507 aa22.01■■□□□ 1.11
SREBF1-204ENST00000395756 CYP27B1O15528 508 aa22.01■■□□□ 1.11
SREBF1-204ENST00000395756 ZNF496Q96IT1 587 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms