RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 ZNF530Q6P9A1 599 aaPredicted RBP26.36■■□□□ 1.81
COL11A2-204ENST00000395194 WWC3Q9ULE0 1092 aa26.36■■□□□ 1.81
COL11A2-204ENST00000395194 KDM6AO15550 1401 aaPredicted RBP26.35■■□□□ 1.81
COL11A2-204ENST00000395194 PLEKHO1Q53GL0 409 aaPredicted RBP26.35■■□□□ 1.81
COL11A2-204ENST00000395194 CD2APQ9Y5K6 639 aa26.35■■□□□ 1.81
COL11A2-204ENST00000395194 GRIN3BO60391 1043 aa26.34■■□□□ 1.81
COL11A2-204ENST00000395194 RBM42Q9BTD8 480 aaKnown RBP26.34■■□□□ 1.81
COL11A2-204ENST00000395194 KNSTRNQ9Y448 316 aa26.34■■□□□ 1.81
COL11A2-204ENST00000395194 KDRP35968 1356 aa26.33■■□□□ 1.81
COL11A2-204ENST00000395194 COL5A3P25940 1745 aaPredicted RBP26.33■■□□□ 1.81
COL11A2-204ENST00000395194 PLEKHG2Q9H7P9 1386 aa26.33■■□□□ 1.8
COL11A2-204ENST00000395194 SLC4A9Q96Q91 983 aa26.32■■□□□ 1.8
COL11A2-204ENST00000395194 ERVV-2B6SEH9 535 aa26.31■■□□□ 1.8
COL11A2-204ENST00000395194 HSP90AB1P08238 724 aaKnown RBP26.31■■□□□ 1.8
COL11A2-204ENST00000395194 DCAF5Q96JK2 942 aa26.31■■□□□ 1.8
COL11A2-204ENST00000395194 MYH14Q7Z406 1995 aaKnown RBP26.3■■□□□ 1.8
COL11A2-204ENST00000395194 SULT6B1Q6IMI4 303 aa26.3■■□□□ 1.8
COL11A2-204ENST00000395194 CABP4P57796 275 aa26.29■■□□□ 1.8
COL11A2-204ENST00000395194 ZNF831Q5JPB2 1677 aa26.28■■□□□ 1.8
COL11A2-204ENST00000395194 AMOTQ4VCS5 1084 aa26.28■■□□□ 1.8
COL11A2-204ENST00000395194 MTHFSP49914 203 aa26.27■■□□□ 1.8
COL11A2-204ENST00000395194 C1QTNF8P60827 252 aa26.27■■□□□ 1.8
COL11A2-204ENST00000395194 C1orf141Q5JVX7 400 aa26.27■■□□□ 1.8
COL11A2-204ENST00000395194 KIF7Q2M1P5 1343 aa26.27■■□□□ 1.8
COL11A2-204ENST00000395194 SCN11AQ9UI33 1791 aa26.27■■□□□ 1.8
COL11A2-204ENST00000395194 VIRMAQ69YN4 1812 aaKnown RBP26.27■■□□□ 1.8
COL11A2-204ENST00000395194 GIGYF1O75420 1035 aaPredicted RBP26.26■■□□□ 1.79
COL11A2-204ENST00000395194 RTCBQ9Y3I0 505 aaKnown RBP26.26■■□□□ 1.79
COL11A2-204ENST00000395194 C4AP0C0L4 1744 aa26.25■■□□□ 1.79
COL11A2-204ENST00000395194 SENP3-EIF4A1A0A087X0R7 540 aa26.25■■□□□ 1.79
COL11A2-204ENST00000395194 IL13P35225 146 aa26.25■■□□□ 1.79
COL11A2-204ENST00000395194 AMER1Q5JTC6 1135 aaPredicted RBP26.25■■□□□ 1.79
COL11A2-204ENST00000395194 MMP10P09238 476 aa26.24■■□□□ 1.79
COL11A2-204ENST00000395194 N4BP2Q86UW6 1770 aaPredicted RBP26.24■■□□□ 1.79
COL11A2-204ENST00000395194 CICQ96RK0 1608 aaPredicted RBP26.24■■□□□ 1.79
COL11A2-204ENST00000395194 PTCD1O75127 700 aaKnown RBP26.23■■□□□ 1.79
COL11A2-204ENST00000395194 TRAPPC3LQ5T215 181 aa26.23■■□□□ 1.79
COL11A2-204ENST00000395194 ATP10DQ9P241 1426 aa26.22■■□□□ 1.79
COL11A2-204ENST00000395194 NFATC2IPQ8NCF5 419 aa26.22■■□□□ 1.79
COL11A2-204ENST00000395194 TJP1Q07157 1748 aa26.22■■□□□ 1.79
COL11A2-204ENST00000395194 KIF13BQ9NQT8 1826 aa26.21■■□□□ 1.79
COL11A2-204ENST00000395194 CNTNAP4Q9C0A0 1308 aa26.2■■□□□ 1.79
COL11A2-204ENST00000395194 KIAA1551Q9HCM1 1747 aa26.2■■□□□ 1.79
COL11A2-204ENST00000395194 ARHGEF1Q92888 912 aaKnown RBP26.2■■□□□ 1.78
COL11A2-204ENST00000395194 HMOX1P09601 288 aa26.19■■□□□ 1.78
COL11A2-204ENST00000395194 CNGB1Q14028 1251 aaPredicted RBP26.19■■□□□ 1.78
COL11A2-204ENST00000395194 CC2D1BQ5T0F9 858 aaKnown RBP26.18■■□□□ 1.78
COL11A2-204ENST00000395194 RC3H1Q5TC82 1133 aaKnown RBP26.18■■□□□ 1.78
COL11A2-204ENST00000395194 RPS6KA4O75676 772 aa26.17■■□□□ 1.78
COL11A2-204ENST00000395194 RFC4P35249 363 aa26.17■■□□□ 1.78
COL11A2-204ENST00000395194 PXDNLA1KZ92 1463 aa26.17■■□□□ 1.78
COL11A2-204ENST00000395194 ZNF526Q8TF50 670 aaPredicted RBP26.16■■□□□ 1.78
COL11A2-204ENST00000395194 GYS1P13807 737 aa26.15■■□□□ 1.78
COL11A2-204ENST00000395194 ADRA2BP18089 450 aa26.15■■□□□ 1.78
COL11A2-204ENST00000395194 CRKLP46109 303 aaKnown RBP26.15■■□□□ 1.78
COL11A2-204ENST00000395194 NLGN1Q8N2Q7 840 aa26.15■■□□□ 1.78
COL11A2-204ENST00000395194 AKAP4Q5JQC9 854 aa26.13■■□□□ 1.77
COL11A2-204ENST00000395194 LGR6Q9HBX8 967 aa26.13■■□□□ 1.77
COL11A2-204ENST00000395194 C10orf71Q711Q0 1435 aa26.13■■□□□ 1.77
COL11A2-204ENST00000395194 ADCY9O60503 1353 aa26.12■■□□□ 1.77
COL11A2-204ENST00000395194 SRP68Q9UHB9 627 aaKnown RBP26.12■■□□□ 1.77
COL11A2-204ENST00000395194 A0A0G2JLW4 131 aa26.11■■□□□ 1.77
COL11A2-204ENST00000395194 PER1O15534 1290 aaPredicted RBP26.11■■□□□ 1.77
COL11A2-204ENST00000395194 GPBP1L1Q9HC44 474 aaPredicted RBP26.11■■□□□ 1.77
COL11A2-204ENST00000395194 SLC52A2Q9HAB3 445 aa26.1■■□□□ 1.77
COL11A2-204ENST00000395194 CCDC87Q9NVE4 849 aa26.1■■□□□ 1.77
COL11A2-204ENST00000395194 PARP3Q9Y6F1 533 aa26.1■■□□□ 1.77
COL11A2-204ENST00000395194 BRCA1P38398 1863 aaKnown RBP26.1■■□□□ 1.77
COL11A2-204ENST00000395194 DIAPH1O60610 1272 aaKnown RBP26.09■■□□□ 1.77
COL11A2-204ENST00000395194 SLC39A6Q13433 755 aa26.09■■□□□ 1.77
COL11A2-204ENST00000395194 BCS1LQ9Y276 419 aa26.09■■□□□ 1.77
COL11A2-204ENST00000395194 RNMTO43148 476 aaKnown RBP26.08■■□□□ 1.77
COL11A2-204ENST00000395194 DNAJC10Q8IXB1 793 aa26.08■■□□□ 1.77
COL11A2-204ENST00000395194 MRC1P22897 1456 aa26.08■■□□□ 1.77
COL11A2-204ENST00000395194 ADAMTS7Q9UKP4 1686 aa26.07■■□□□ 1.76
COL11A2-204ENST00000395194 DPEP1P16444 411 aa26.07■■□□□ 1.76
COL11A2-204ENST00000395194 MTHFSDQ2M296 383 aaKnown RBP26.07■■□□□ 1.76
COL11A2-204ENST00000395194 CEP350Q5VT06 3117 aa26.07■■□□□ 1.76
COL11A2-204ENST00000395194 TGFB2P61812 414 aa26.06■■□□□ 1.76
COL11A2-204ENST00000395194 FKBP8Q14318 412 aa26.06■■□□□ 1.76
COL11A2-204ENST00000395194 INTS5Q6P9B9 1019 aaKnown RBP26.05■■□□□ 1.76
COL11A2-204ENST00000395194 USP42Q9H9J4 1324 aaKnown RBP26.05■■□□□ 1.76
COL11A2-204ENST00000395194 KCPQ6ZWJ8 1503 aa26.04■■□□□ 1.76
COL11A2-204ENST00000395194 COL3A1P02461 1466 aaPredicted RBP26.04■■□□□ 1.76
COL11A2-204ENST00000395194 DDR1Q08345 913 aa26.03■■□□□ 1.76
COL11A2-204ENST00000395194 U2SURPO15042 1029 aaKnown RBP26.02■■□□□ 1.76
COL11A2-204ENST00000395194 FCHSD2O94868 740 aa26.02■■□□□ 1.76
COL11A2-204ENST00000395194 UBR2Q8IWV8 1755 aa26.01■■□□□ 1.75
COL11A2-204ENST00000395194 ARFGEF1Q9Y6D6 1849 aa26.01■■□□□ 1.75
COL11A2-204ENST00000395194 ARHGAP27Q6ZUM4 889 aa26■■□□□ 1.75
COL11A2-204ENST00000395194 AFDNP55196 1824 aaKnown RBP26■■□□□ 1.75
COL11A2-204ENST00000395194 SOS1Q07889 1333 aaPredicted RBP25.99■■□□□ 1.75
COL11A2-204ENST00000395194 CYP19A1P11511 503 aaPredicted RBP25.99■■□□□ 1.75
COL11A2-204ENST00000395194 USPL1Q5W0Q7 1092 aa25.99■■□□□ 1.75
COL11A2-204ENST00000395194 ZPR1O75312 459 aa25.98■■□□□ 1.75
COL11A2-204ENST00000395194 ZBTB1Q9Y2K1 713 aa25.98■■□□□ 1.75
COL11A2-204ENST00000395194 KCNA3P22001 575 aa25.97■■□□□ 1.75
COL11A2-204ENST00000395194 COL15A1P39059 1388 aa25.96■■□□□ 1.75
COL11A2-204ENST00000395194 NPC1L1Q9UHC9 1359 aa25.96■■□□□ 1.75
COL11A2-204ENST00000395194 POLRMTO00411 1230 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms