RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 API5Q9BZZ5 524 aaKnown RBP17.6■□□□□ 0.41
PPP3CA-202ENST00000394853 SPG7Q9UQ90 795 aa17.6■□□□□ 0.41
PPP3CA-202ENST00000394853 CRB1P82279 1406 aa17.6■□□□□ 0.41
PPP3CA-202ENST00000394853 CDK11BP21127 795 aaKnown RBP17.6■□□□□ 0.41
PPP3CA-202ENST00000394853 G2E3Q7L622 706 aa17.6■□□□□ 0.41
PPP3CA-202ENST00000394853 F6X3S4 739 aa17.59■□□□□ 0.41
PPP3CA-202ENST00000394853 BRPF1P55201 1214 aaPredicted RBP17.59■□□□□ 0.41
PPP3CA-202ENST00000394853 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
PPP3CA-202ENST00000394853 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
PPP3CA-202ENST00000394853 STK31Q9BXU1 1019 aa17.59■□□□□ 0.41
PPP3CA-202ENST00000394853 AXIN2Q9Y2T1 843 aa17.59■□□□□ 0.41
PPP3CA-202ENST00000394853 HDAC1Q13547 482 aaPredicted RBP17.58■□□□□ 0.41
PPP3CA-202ENST00000394853 LGR6Q9HBX8 967 aa17.58■□□□□ 0.41
PPP3CA-202ENST00000394853 RGPD1P0DJD0 1748 aa17.57■□□□□ 0.4
PPP3CA-202ENST00000394853 ABCC4O15439 1325 aa17.57■□□□□ 0.4
PPP3CA-202ENST00000394853 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
PPP3CA-202ENST00000394853 APBB1O00213 710 aa17.56■□□□□ 0.4
PPP3CA-202ENST00000394853 ARHGEF25Q86VW2 580 aa17.56■□□□□ 0.4
PPP3CA-202ENST00000394853 C1orf167Q5SNV9 1468 aa17.55■□□□□ 0.4
PPP3CA-202ENST00000394853 EXOC5O00471 708 aa17.55■□□□□ 0.4
PPP3CA-202ENST00000394853 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
PPP3CA-202ENST00000394853 CABP4P57796 275 aa17.54■□□□□ 0.4
PPP3CA-202ENST00000394853 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
PPP3CA-202ENST00000394853 SIRT2Q8IXJ6 389 aa17.54■□□□□ 0.4
PPP3CA-202ENST00000394853 SMC5Q8IY18 1101 aa17.54■□□□□ 0.4
PPP3CA-202ENST00000394853 NPHP1O15259 732 aa17.54■□□□□ 0.4
PPP3CA-202ENST00000394853 SPATA31A3Q5VYP0 1347 aa17.54■□□□□ 0.4
PPP3CA-202ENST00000394853 MARF1Q9Y4F3 1742 aaKnown RBP17.53■□□□□ 0.4
PPP3CA-202ENST00000394853 KIF24Q5T7B8 1368 aa17.53■□□□□ 0.4
PPP3CA-202ENST00000394853 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
PPP3CA-202ENST00000394853 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
PPP3CA-202ENST00000394853 KCNQ3O43525 872 aa17.52■□□□□ 0.4
PPP3CA-202ENST00000394853 FKBP5Q13451 457 aaPredicted RBP17.52■□□□□ 0.4
PPP3CA-202ENST00000394853 MEIS3Q99687 375 aa17.52■□□□□ 0.4
PPP3CA-202ENST00000394853 PTCD1O75127 700 aaKnown RBP17.51■□□□□ 0.39
PPP3CA-202ENST00000394853 NWD1Q149M9 1564 aa17.51■□□□□ 0.39
PPP3CA-202ENST00000394853 RTL1A6NKG5 1358 aa17.51■□□□□ 0.39
PPP3CA-202ENST00000394853 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
PPP3CA-202ENST00000394853 CHMP4BQ9H444 224 aaKnown RBP17.51■□□□□ 0.39
PPP3CA-202ENST00000394853 LTN1O94822 1766 aa17.51■□□□□ 0.39
PPP3CA-202ENST00000394853 CHD1LQ86WJ1 897 aa17.51■□□□□ 0.39
PPP3CA-202ENST00000394853 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
PPP3CA-202ENST00000394853 NFAT5O94916 1531 aa17.5■□□□□ 0.39
PPP3CA-202ENST00000394853 NUCB1Q02818 461 aa17.49■□□□□ 0.39
PPP3CA-202ENST00000394853 ANXA1P04083 346 aa17.49■□□□□ 0.39
PPP3CA-202ENST00000394853 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 INTS3Q68E01 1043 aaKnown RBP17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 MFAP1P55081 439 aaKnown RBP17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 CCDC30Q5VVM6 783 aa17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 BTBD11A6QL63 1104 aa17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 FLIIQ13045 1269 aa17.48■□□□□ 0.39
PPP3CA-202ENST00000394853 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
PPP3CA-202ENST00000394853 PTPRCP08575 1304 aa17.47■□□□□ 0.39
PPP3CA-202ENST00000394853 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
PPP3CA-202ENST00000394853 PHAXQ9H814 394 aaKnown RBP17.47■□□□□ 0.39
PPP3CA-202ENST00000394853 IL2RBP14784 551 aa17.46■□□□□ 0.39
PPP3CA-202ENST00000394853 USP19O94966 1318 aa17.46■□□□□ 0.39
PPP3CA-202ENST00000394853 RGS12O14924 1447 aa17.46■□□□□ 0.39
PPP3CA-202ENST00000394853 MST1RQ04912 1400 aa17.46■□□□□ 0.39
PPP3CA-202ENST00000394853 HSPA1LP34931 641 aa17.46■□□□□ 0.38
PPP3CA-202ENST00000394853 UPF2Q9HAU5 1272 aaKnown RBP17.46■□□□□ 0.38
PPP3CA-202ENST00000394853 USP21Q9UK80 565 aa17.46■□□□□ 0.38
PPP3CA-202ENST00000394853 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
PPP3CA-202ENST00000394853 DDB1Q16531 1140 aa17.45■□□□□ 0.38
PPP3CA-202ENST00000394853 FAM98CQ17RN3 349 aaKnown RBP17.45■□□□□ 0.38
PPP3CA-202ENST00000394853 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
PPP3CA-202ENST00000394853 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
PPP3CA-202ENST00000394853 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
PPP3CA-202ENST00000394853 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
PPP3CA-202ENST00000394853 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
PPP3CA-202ENST00000394853 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
PPP3CA-202ENST00000394853 ERBB3P21860 1342 aa17.43■□□□□ 0.38
PPP3CA-202ENST00000394853 CEP85Q6P2H3 762 aa17.42■□□□□ 0.38
PPP3CA-202ENST00000394853 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
PPP3CA-202ENST00000394853 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
PPP3CA-202ENST00000394853 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
PPP3CA-202ENST00000394853 SLC39A6Q13433 755 aa17.42■□□□□ 0.38
PPP3CA-202ENST00000394853 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
PPP3CA-202ENST00000394853 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
PPP3CA-202ENST00000394853 STRCP1A6NGW2 1772 aa17.41■□□□□ 0.38
PPP3CA-202ENST00000394853 PXDNQ92626 1479 aa17.41■□□□□ 0.38
PPP3CA-202ENST00000394853 ANKRD44Q8N8A2 993 aa17.4■□□□□ 0.38
PPP3CA-202ENST00000394853 OTUD7AQ8TE49 926 aaPredicted RBP17.4■□□□□ 0.38
PPP3CA-202ENST00000394853 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
PPP3CA-202ENST00000394853 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
PPP3CA-202ENST00000394853 CEMIPQ8WUJ3 1361 aa17.39■□□□□ 0.37
PPP3CA-202ENST00000394853 MYL6BP14649 208 aa17.39■□□□□ 0.37
PPP3CA-202ENST00000394853 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
PPP3CA-202ENST00000394853 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
PPP3CA-202ENST00000394853 SPRYD3Q8NCJ5 442 aa17.38■□□□□ 0.37
PPP3CA-202ENST00000394853 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
PPP3CA-202ENST00000394853 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
PPP3CA-202ENST00000394853 SOS2Q07890 1332 aaPredicted RBP17.37■□□□□ 0.37
PPP3CA-202ENST00000394853 SLIT3O75094 1523 aa17.36■□□□□ 0.37
PPP3CA-202ENST00000394853 GNAI2P04899 355 aa17.36■□□□□ 0.37
PPP3CA-202ENST00000394853 GTF2E1P29083 439 aaPredicted RBP17.36■□□□□ 0.37
PPP3CA-202ENST00000394853 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms