RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 C4BP0C0L5 1744 aa11.47□□□□□ -0.57
APLF-202ENST00000394342 CICQ96RK0 1608 aaPredicted RBP11.47□□□□□ -0.57
APLF-202ENST00000394342 ERVV-2B6SEH9 535 aa11.47□□□□□ -0.57
APLF-202ENST00000394342 U2SURPO15042 1029 aaKnown RBP11.47□□□□□ -0.57
APLF-202ENST00000394342 FKBP8Q14318 412 aa11.47□□□□□ -0.57
APLF-202ENST00000394342 SAMD1Q6SPF0 538 aaPredicted RBP11.47□□□□□ -0.57
APLF-202ENST00000394342 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
APLF-202ENST00000394342 SMARCC1Q92922 1105 aaPredicted RBP11.47□□□□□ -0.57
APLF-202ENST00000394342 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
APLF-202ENST00000394342 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
APLF-202ENST00000394342 TMOD3Q9NYL9 352 aa11.47□□□□□ -0.57
APLF-202ENST00000394342 HMGB2P26583 209 aaKnown RBP11.46□□□□□ -0.57
APLF-202ENST00000394342 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.57
APLF-202ENST00000394342 PIGBQ92521 554 aa11.46□□□□□ -0.57
APLF-202ENST00000394342 LRRC4BQ9NT99 713 aa11.46□□□□□ -0.57
APLF-202ENST00000394342 STK32BQ9NY57 414 aa11.46□□□□□ -0.57
APLF-202ENST00000394342 MRC1P22897 1456 aa11.45□□□□□ -0.58
APLF-202ENST00000394342 PALLDQ8WX93 1383 aa11.45□□□□□ -0.58
APLF-202ENST00000394342 SLC15A2Q16348 729 aa11.45□□□□□ -0.58
APLF-202ENST00000394342 TJP1Q07157 1748 aa11.44□□□□□ -0.58
APLF-202ENST00000394342 DSG3P32926 999 aa11.44□□□□□ -0.58
APLF-202ENST00000394342 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
APLF-202ENST00000394342 CCNL1Q9UK58 526 aaPredicted RBP11.44□□□□□ -0.58
APLF-202ENST00000394342 MYBBP1AQ9BQG0 1328 aaKnown RBP11.43□□□□□ -0.58
APLF-202ENST00000394342 ZNF316A6NFI3 1004 aaPredicted RBP11.43□□□□□ -0.58
APLF-202ENST00000394342 U2AF1L5P0DN76 240 aaPredicted RBP11.43□□□□□ -0.58
APLF-202ENST00000394342 U2AF1Q01081 240 aaKnown RBP eCLIP11.43□□□□□ -0.58
APLF-202ENST00000394342 MTHFSDQ2M296 383 aaKnown RBP11.43□□□□□ -0.58
APLF-202ENST00000394342 GAS2L2Q8NHY3 880 aa11.43□□□□□ -0.58
APLF-202ENST00000394342 FCHSD2O94868 740 aa11.42□□□□□ -0.58
APLF-202ENST00000394342 CABP4P57796 275 aa11.42□□□□□ -0.58
APLF-202ENST00000394342 ZNF827Q17R98 1081 aa11.42□□□□□ -0.58
APLF-202ENST00000394342 AKT1S1Q96B36 256 aa11.42□□□□□ -0.58
APLF-202ENST00000394342 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
APLF-202ENST00000394342 PRKAR2BP31323 418 aa11.41□□□□□ -0.58
APLF-202ENST00000394342 ATG3Q9NT62 314 aa11.41□□□□□ -0.58
APLF-202ENST00000394342 ASAP1Q9ULH1 1129 aa11.41□□□□□ -0.58
APLF-202ENST00000394342 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
APLF-202ENST00000394342 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
APLF-202ENST00000394342 RNMTO43148 476 aaKnown RBP11.4□□□□□ -0.58
APLF-202ENST00000394342 KCNQ4P56696 695 aa11.4□□□□□ -0.58
APLF-202ENST00000394342 SIK1P57059 783 aa11.4□□□□□ -0.58
APLF-202ENST00000394342 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
APLF-202ENST00000394342 ZNF219Q9P2Y4 722 aaPredicted RBP11.4□□□□□ -0.58
APLF-202ENST00000394342 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
APLF-202ENST00000394342 GNAT3A8MTJ3 354 aa11.39□□□□□ -0.59
APLF-202ENST00000394342 NFATC2IPQ8NCF5 419 aa11.39□□□□□ -0.59
APLF-202ENST00000394342 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
APLF-202ENST00000394342 SLC52A2Q9HAB3 445 aa11.39□□□□□ -0.59
APLF-202ENST00000394342 LGR6Q9HBX8 967 aa11.39□□□□□ -0.59
APLF-202ENST00000394342 PNNQ9H307 717 aaKnown RBP11.38□□□□□ -0.59
APLF-202ENST00000394342 SPON1Q9HCB6 807 aa11.38□□□□□ -0.59
APLF-202ENST00000394342 TFCP2L1Q9NZI6 479 aa11.38□□□□□ -0.59
APLF-202ENST00000394342 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
APLF-202ENST00000394342 PNPLA7Q6ZV29 1317 aa11.37□□□□□ -0.59
APLF-202ENST00000394342 NEFMP07197 916 aa11.37□□□□□ -0.59
APLF-202ENST00000394342 ATP6V1AP38606 617 aa11.37□□□□□ -0.59
APLF-202ENST00000394342 PDGFDQ9GZP0 370 aaPredicted RBP11.37□□□□□ -0.59
APLF-202ENST00000394342 ATF5Q9Y2D1 282 aaPredicted RBP11.37□□□□□ -0.59
APLF-202ENST00000394342 CEMIPQ8WUJ3 1361 aa11.37□□□□□ -0.59
APLF-202ENST00000394342 LAMB4A4D0S4 1761 aa11.36□□□□□ -0.59
APLF-202ENST00000394342 ITPK1Q13572 414 aa11.36□□□□□ -0.59
APLF-202ENST00000394342 LINC00116Q8NCU8 138 aa11.36□□□□□ -0.59
APLF-202ENST00000394342 FLAD1Q8NFF5 587 aa11.36□□□□□ -0.59
APLF-202ENST00000394342 SLC16A10Q8TF71 515 aa11.36□□□□□ -0.59
APLF-202ENST00000394342 AK7Q96M32 723 aa11.36□□□□□ -0.59
APLF-202ENST00000394342 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
APLF-202ENST00000394342 MTFR1LQ9H019 292 aa11.36□□□□□ -0.59
APLF-202ENST00000394342 HTATSF1O43719 755 aaKnown RBP11.35□□□□□ -0.59
APLF-202ENST00000394342 ZBTB7AO95365 584 aa11.35□□□□□ -0.59
APLF-202ENST00000394342 TEFQ10587 303 aa11.35□□□□□ -0.59
APLF-202ENST00000394342 IL17REQ8NFR9 667 aa11.35□□□□□ -0.59
APLF-202ENST00000394342 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
APLF-202ENST00000394342 PLEKHF1Q96S99 279 aa11.35□□□□□ -0.59
APLF-202ENST00000394342 GOLGB1Q14789 3259 aaKnown RBP11.35□□□□□ -0.59
APLF-202ENST00000394342 CHD4Q14839 1912 aa11.35□□□□□ -0.59
APLF-202ENST00000394342 RTF1Q92541 710 aaKnown RBP11.34□□□□□ -0.59
APLF-202ENST00000394342 CNTNAP4Q9C0A0 1308 aa11.34□□□□□ -0.59
APLF-202ENST00000394342 MAPK8IP3Q9UPT6 1336 aa11.34□□□□□ -0.59
APLF-202ENST00000394342 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.6
APLF-202ENST00000394342 PTCD1O75127 700 aaKnown RBP11.33□□□□□ -0.6
APLF-202ENST00000394342 SSFA2P28290 1259 aa11.33□□□□□ -0.6
APLF-202ENST00000394342 PTGER2P43116 358 aa11.33□□□□□ -0.6
APLF-202ENST00000394342 NFE2L2Q16236 605 aa11.33□□□□□ -0.6
APLF-202ENST00000394342 RC3H1Q5TC82 1133 aaKnown RBP11.33□□□□□ -0.6
APLF-202ENST00000394342 SLC39A6Q13433 755 aa11.32□□□□□ -0.6
APLF-202ENST00000394342 WDR43Q15061 677 aaKnown RBP eCLIP11.32□□□□□ -0.6
APLF-202ENST00000394342 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
APLF-202ENST00000394342 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
APLF-202ENST00000394342 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
APLF-202ENST00000394342 PPP1R1BQ9UD71 204 aaPredicted RBP11.32□□□□□ -0.6
APLF-202ENST00000394342 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
APLF-202ENST00000394342 UTRNP46939 3433 aa11.31□□□□□ -0.6
APLF-202ENST00000394342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
APLF-202ENST00000394342 GNPATO15228 680 aa11.31□□□□□ -0.6
APLF-202ENST00000394342 TTC5Q8N0Z6 440 aa11.31□□□□□ -0.6
APLF-202ENST00000394342 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
APLF-202ENST00000394342 ANP32CO43423 234 aa11.3□□□□□ -0.6
APLF-202ENST00000394342 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
APLF-202ENST00000394342 MCM10Q7L590 875 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms