RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 DNAJC5GQ8N7S2 189 aa21.64■■□□□ 1.05
TGFA-202ENST00000394241 RAPGEF4Q8WZA2 1011 aa21.63■■□□□ 1.05
TGFA-202ENST00000394241 C4BP0C0L5 1744 aa21.62■■□□□ 1.05
TGFA-202ENST00000394241 CICQ96RK0 1608 aaPredicted RBP21.62■■□□□ 1.05
TGFA-202ENST00000394241 PALLDQ8WX93 1383 aa21.61■■□□□ 1.05
TGFA-202ENST00000394241 TOGARAM1Q9Y4F4 1720 aa21.6■■□□□ 1.05
TGFA-202ENST00000394241 UBR3Q6ZT12 1888 aa21.6■■□□□ 1.05
TGFA-202ENST00000394241 TOMM70O94826 608 aa21.6■■□□□ 1.05
TGFA-202ENST00000394241 TATP17735 454 aaPredicted RBP21.6■■□□□ 1.05
TGFA-202ENST00000394241 NUDCQ9Y266 331 aa21.6■■□□□ 1.05
TGFA-202ENST00000394241 PKD1L3Q7Z443 1732 aa21.6■■□□□ 1.05
TGFA-202ENST00000394241 AK7Q96M32 723 aa21.59■■□□□ 1.05
TGFA-202ENST00000394241 KDRP35968 1356 aa21.59■■□□□ 1.05
TGFA-202ENST00000394241 PLEKHG2Q9H7P9 1386 aa21.59■■□□□ 1.05
TGFA-202ENST00000394241 U2SURPO15042 1029 aaKnown RBP21.58■■□□□ 1.05
TGFA-202ENST00000394241 WDR90Q96KV7 1748 aa21.58■■□□□ 1.04
TGFA-202ENST00000394241 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
TGFA-202ENST00000394241 AMIGO3Q86WK7 504 aa21.57■■□□□ 1.04
TGFA-202ENST00000394241 PHF14O94880 888 aa21.56■■□□□ 1.04
TGFA-202ENST00000394241 AEBP1Q8IUX7 1158 aa21.56■■□□□ 1.04
TGFA-202ENST00000394241 MPRIPQ6WCQ1 1025 aa21.55■■□□□ 1.04
TGFA-202ENST00000394241 ITGB4P16144 1822 aa21.55■■□□□ 1.04
TGFA-202ENST00000394241 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.54■■□□□ 1.04
TGFA-202ENST00000394241 HMOX1P09601 288 aa21.54■■□□□ 1.04
TGFA-202ENST00000394241 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
TGFA-202ENST00000394241 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
TGFA-202ENST00000394241 COL13A1Q5TAT6 717 aaPredicted RBP21.53■■□□□ 1.04
TGFA-202ENST00000394241 SMIM5Q71RC9 77 aa21.53■■□□□ 1.04
TGFA-202ENST00000394241 U2AF1L5P0DN76 240 aaPredicted RBP21.52■■□□□ 1.04
TGFA-202ENST00000394241 U2AF1Q01081 240 aaKnown RBP eCLIP21.52■■□□□ 1.04
TGFA-202ENST00000394241 SMARCC1Q92922 1105 aaPredicted RBP21.52■■□□□ 1.04
TGFA-202ENST00000394241 KIF13BQ9NQT8 1826 aa21.51■■□□□ 1.03
TGFA-202ENST00000394241 SSFA2P28290 1259 aa21.51■■□□□ 1.03
TGFA-202ENST00000394241 SPG7Q9UQ90 795 aa21.51■■□□□ 1.03
TGFA-202ENST00000394241 CAPN15O75808 1086 aa21.5■■□□□ 1.03
TGFA-202ENST00000394241 NMRK2Q9NPI5 230 aa21.5■■□□□ 1.03
TGFA-202ENST00000394241 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.5■■□□□ 1.03
TGFA-202ENST00000394241 N4BP2Q86UW6 1770 aaPredicted RBP21.5■■□□□ 1.03
TGFA-202ENST00000394241 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
TGFA-202ENST00000394241 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
TGFA-202ENST00000394241 KLRG1Q96E93 195 aa21.49■■□□□ 1.03
TGFA-202ENST00000394241 PXDNLA1KZ92 1463 aa21.49■■□□□ 1.03
TGFA-202ENST00000394241 JMYQ8N9B5 988 aa21.48■■□□□ 1.03
TGFA-202ENST00000394241 RBM46Q8TBY0 533 aaKnown RBP21.48■■□□□ 1.03
TGFA-202ENST00000394241 AMOTQ4VCS5 1084 aa21.47■■□□□ 1.03
TGFA-202ENST00000394241 PLEKHO1Q53GL0 409 aaPredicted RBP21.47■■□□□ 1.03
TGFA-202ENST00000394241 RSPH6AQ9H0K4 717 aa21.47■■□□□ 1.03
TGFA-202ENST00000394241 BCS1LQ9Y276 419 aa21.47■■□□□ 1.03
TGFA-202ENST00000394241 HTRA3P83110 453 aa21.46■■□□□ 1.03
TGFA-202ENST00000394241 WDR43Q15061 677 aaKnown RBP eCLIP21.46■■□□□ 1.03
TGFA-202ENST00000394241 CYP27B1O15528 508 aa21.45■■□□□ 1.02
TGFA-202ENST00000394241 FCHSD2O94868 740 aa21.45■■□□□ 1.02
TGFA-202ENST00000394241 MMP10P09238 476 aa21.45■■□□□ 1.02
TGFA-202ENST00000394241 PRKAR2BP31323 418 aa21.45■■□□□ 1.02
TGFA-202ENST00000394241 ARHGAP27Q6ZUM4 889 aa21.45■■□□□ 1.02
TGFA-202ENST00000394241 C16orf71Q8IYS4 520 aaPredicted RBP21.45■■□□□ 1.02
TGFA-202ENST00000394241 LINC00116Q8NCU8 138 aa21.45■■□□□ 1.02
TGFA-202ENST00000394241 TGFB2P61812 414 aa21.44■■□□□ 1.02
TGFA-202ENST00000394241 TNS4Q8IZW8 715 aa21.44■■□□□ 1.02
TGFA-202ENST00000394241 PIGBQ92521 554 aa21.44■■□□□ 1.02
TGFA-202ENST00000394241 MRS2Q9HD23 443 aa21.44■■□□□ 1.02
TGFA-202ENST00000394241 LOC102724428A0A0B4J2F2 783 aa21.43■■□□□ 1.02
TGFA-202ENST00000394241 GNPATO15228 680 aa21.43■■□□□ 1.02
TGFA-202ENST00000394241 SIK1P57059 783 aa21.43■■□□□ 1.02
TGFA-202ENST00000394241 ZNF530Q6P9A1 599 aaPredicted RBP21.43■■□□□ 1.02
TGFA-202ENST00000394241 A0A0G2JLW4 131 aa21.42■■□□□ 1.02
TGFA-202ENST00000394241 BRCA1P38398 1863 aaKnown RBP21.42■■□□□ 1.02
TGFA-202ENST00000394241 PRELPP51888 382 aa21.42■■□□□ 1.02
TGFA-202ENST00000394241 FSTL1Q12841 308 aa21.42■■□□□ 1.02
TGFA-202ENST00000394241 IFNL2Q8IZJ0 200 aa21.42■■□□□ 1.02
TGFA-202ENST00000394241 NEFMP07197 916 aa21.41■■□□□ 1.02
TGFA-202ENST00000394241 PHKG2P15735 406 aa21.41■■□□□ 1.02
TGFA-202ENST00000394241 CCDC184Q52MB2 194 aa21.41■■□□□ 1.02
TGFA-202ENST00000394241 C1orf141Q5JVX7 400 aa21.41■■□□□ 1.02
TGFA-202ENST00000394241 PNNQ9H307 717 aaKnown RBP21.41■■□□□ 1.02
TGFA-202ENST00000394241 C10orf71Q711Q0 1435 aa21.4■■□□□ 1.02
TGFA-202ENST00000394241 GAS2L2Q8NHY3 880 aa21.39■■□□□ 1.01
TGFA-202ENST00000394241 ARFGEF1Q9Y6D6 1849 aa21.39■■□□□ 1.01
TGFA-202ENST00000394241 MAPK8IP3Q9UPT6 1336 aa21.38■■□□□ 1.01
TGFA-202ENST00000394241 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
TGFA-202ENST00000394241 ITPK1Q13572 414 aa21.38■■□□□ 1.01
TGFA-202ENST00000394241 MTHFSDQ2M296 383 aaKnown RBP21.38■■□□□ 1.01
TGFA-202ENST00000394241 C9orf131Q5VYM1 1079 aa21.38■■□□□ 1.01
TGFA-202ENST00000394241 PCNTO95613 3336 aa21.37■■□□□ 1.01
TGFA-202ENST00000394241 DPEP1P16444 411 aa21.37■■□□□ 1.01
TGFA-202ENST00000394241 ATP6V1AP38606 617 aa21.37■■□□□ 1.01
TGFA-202ENST00000394241 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
TGFA-202ENST00000394241 AKAP4Q5JQC9 854 aa21.37■■□□□ 1.01
TGFA-202ENST00000394241 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
TGFA-202ENST00000394241 PHACTR3Q96KR7 559 aa21.36■■□□□ 1.01
TGFA-202ENST00000394241 C4AP0C0L4 1744 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 KDM2BQ8NHM5 1336 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 VIRMAQ69YN4 1812 aaKnown RBP21.35■■□□□ 1.01
TGFA-202ENST00000394241 PLEKHF1Q96S99 279 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 CCDC87Q9NVE4 849 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 TMOD3Q9NYL9 352 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 ADAMTS8Q9UP79 889 aa21.35■■□□□ 1.01
TGFA-202ENST00000394241 KDM6AO15550 1401 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms