RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 MYH16Q9H6N6 1097 aa29.28■■■□□ 2.28
RARA-203ENST00000394086 COL3A1P02461 1466 aaPredicted RBP29.28■■■□□ 2.28
RARA-203ENST00000394086 NCAPD2Q15021 1401 aa29.27■■■□□ 2.28
RARA-203ENST00000394086 LRRC37A3O60309 1634 aa29.27■■■□□ 2.28
RARA-203ENST00000394086 U2SURPO15042 1029 aaKnown RBP29.27■■■□□ 2.28
RARA-203ENST00000394086 SULT6B1Q6IMI4 303 aa29.27■■■□□ 2.28
RARA-203ENST00000394086 AEBP1Q8IUX7 1158 aa29.26■■■□□ 2.27
RARA-203ENST00000394086 ANTXR1Q9H6X2 564 aa29.25■■■□□ 2.27
RARA-203ENST00000394086 MARCH10Q8NA82 808 aaPredicted RBP29.24■■■□□ 2.27
RARA-203ENST00000394086 ZCRB1Q8TBF4 217 aaKnown RBP29.24■■■□□ 2.27
RARA-203ENST00000394086 TNS2Q63HR2 1409 aa29.24■■■□□ 2.27
RARA-203ENST00000394086 DDX54Q8TDD1 881 aaKnown RBP29.23■■■□□ 2.27
RARA-203ENST00000394086 HMOX1P09601 288 aa29.23■■■□□ 2.27
RARA-203ENST00000394086 OVOS2A0A0G2JMS6 1433 aa29.23■■■□□ 2.27
RARA-203ENST00000394086 SOCS7O14512 581 aa29.21■■■□□ 2.27
RARA-203ENST00000394086 SEC24BO95487 1268 aa29.21■■■□□ 2.27
RARA-203ENST00000394086 FAM196AQ6ZSG2 479 aa29.2■■■□□ 2.27
RARA-203ENST00000394086 RGPD1P0DJD0 1748 aa29.2■■■□□ 2.26
RARA-203ENST00000394086 EP400Q96L91 3159 aa29.2■■■□□ 2.26
RARA-203ENST00000394086 PDZRN3Q9UPQ7 1066 aa29.19■■■□□ 2.26
RARA-203ENST00000394086 PCDHB15Q9Y5E8 787 aa29.18■■■□□ 2.26
RARA-203ENST00000394086 KDRP35968 1356 aa29.17■■■□□ 2.26
RARA-203ENST00000394086 MVPQ14764 893 aaKnown RBP29.17■■■□□ 2.26
RARA-203ENST00000394086 U2AF1L5P0DN76 240 aaPredicted RBP29.16■■■□□ 2.26
RARA-203ENST00000394086 U2AF1Q01081 240 aaKnown RBP eCLIP29.16■■■□□ 2.26
RARA-203ENST00000394086 UPF1Q92900 1129 aaKnown RBP eCLIP29.16■■■□□ 2.26
RARA-203ENST00000394086 SPG7Q9UQ90 795 aa29.16■■■□□ 2.26
RARA-203ENST00000394086 ZKSCAN2Q63HK3 967 aa29.15■■■□□ 2.26
RARA-203ENST00000394086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.13■■■□□ 2.25
RARA-203ENST00000394086 PLEKHO1Q53GL0 409 aaPredicted RBP29.13■■■□□ 2.25
RARA-203ENST00000394086 TBC1D2Q9BYX2 928 aa29.13■■■□□ 2.25
RARA-203ENST00000394086 PCDH11XQ9BZA7 1347 aa29.12■■■□□ 2.25
RARA-203ENST00000394086 PCDH11YQ9BZA8 1340 aa29.12■■■□□ 2.25
RARA-203ENST00000394086 RLBP1P12271 317 aa29.11■■■□□ 2.25
RARA-203ENST00000394086 HDAC1Q13547 482 aaPredicted RBP29.11■■■□□ 2.25
RARA-203ENST00000394086 CYP27B1O15528 508 aa29.11■■■□□ 2.25
RARA-203ENST00000394086 TRIM37O94972 964 aa29.11■■■□□ 2.25
RARA-203ENST00000394086 AMOTQ4VCS5 1084 aa29.1■■■□□ 2.25
RARA-203ENST00000394086 DZIP1LQ8IYY4 767 aaKnown RBP29.09■■■□□ 2.25
RARA-203ENST00000394086 IL16Q14005 1332 aa29.09■■■□□ 2.25
RARA-203ENST00000394086 SLKQ9H2G2 1235 aaPredicted RBP29.08■■■□□ 2.25
RARA-203ENST00000394086 ACSBG1Q96GR2 724 aa29.08■■■□□ 2.25
RARA-203ENST00000394086 SHANK3Q9BYB0 1731 aa29.07■■■□□ 2.24
RARA-203ENST00000394086 DDX19BQ9UMR2 479 aa29.07■■■□□ 2.24
RARA-203ENST00000394086 PKD1L3Q7Z443 1732 aa29.07■■■□□ 2.24
RARA-203ENST00000394086 PRKAR2BP31323 418 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 ZNF530Q6P9A1 599 aaPredicted RBP29.06■■■□□ 2.24
RARA-203ENST00000394086 PLEKHG2Q9H7P9 1386 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 BCL9O00512 1426 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 SF3B2Q13435 895 aaKnown RBP29.06■■■□□ 2.24
RARA-203ENST00000394086 CCDC125Q86Z20 511 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 FTSJ3Q8IY81 847 aaKnown RBP29.06■■■□□ 2.24
RARA-203ENST00000394086 CHMP5Q9NZZ3 219 aa29.06■■■□□ 2.24
RARA-203ENST00000394086 ISY1Q9ULR0 285 aaKnown RBP29.06■■■□□ 2.24
RARA-203ENST00000394086 FCHSD2O94868 740 aa29.05■■■□□ 2.24
RARA-203ENST00000394086 NEUROD2Q15784 382 aa29.05■■■□□ 2.24
RARA-203ENST00000394086 IFNL2Q8IZJ0 200 aa29.05■■■□□ 2.24
RARA-203ENST00000394086 PHKG2P15735 406 aa29.04■■■□□ 2.24
RARA-203ENST00000394086 RRP7AQ9Y3A4 280 aaKnown RBP29.04■■■□□ 2.24
RARA-203ENST00000394086 EIF5BO60841 1220 aaKnown RBP29.03■■■□□ 2.24
RARA-203ENST00000394086 PTF1AQ7RTS3 328 aa29.03■■■□□ 2.24
RARA-203ENST00000394086 KCNQ2O43526 872 aa29.03■■■□□ 2.24
RARA-203ENST00000394086 KAT6BQ8WYB5 2073 aa29.02■■■□□ 2.24
RARA-203ENST00000394086 MCM4P33991 863 aa29.01■■■□□ 2.24
RARA-203ENST00000394086 MTHFSDQ2M296 383 aaKnown RBP29.01■■■□□ 2.24
RARA-203ENST00000394086 C1orf141Q5JVX7 400 aa29.01■■■□□ 2.24
RARA-203ENST00000394086 C22orf23Q9BZE7 217 aa29.01■■■□□ 2.24
RARA-203ENST00000394086 FSD2A1L4K1 749 aa29.01■■■□□ 2.23
RARA-203ENST00000394086 SYTL4Q96C24 671 aaPredicted RBP29.01■■■□□ 2.23
RARA-203ENST00000394086 PHACTR3Q96KR7 559 aa29.01■■■□□ 2.23
RARA-203ENST00000394086 BCL11BQ9C0K0 894 aaPredicted RBP29■■■□□ 2.23
RARA-203ENST00000394086 NKX1-1Q15270 411 aaPredicted RBP28.99■■■□□ 2.23
RARA-203ENST00000394086 PRIM1P49642 420 aaKnown RBP28.99■■■□□ 2.23
RARA-203ENST00000394086 SMC5Q8IY18 1101 aa28.99■■■□□ 2.23
RARA-203ENST00000394086 GOLGA6L3A6NEY3 463 aa28.98■■■□□ 2.23
RARA-203ENST00000394086 APBA3O96018 575 aa28.98■■■□□ 2.23
RARA-203ENST00000394086 PNNQ9H307 717 aaKnown RBP28.98■■■□□ 2.23
RARA-203ENST00000394086 SBF2Q86WG5 1849 aa28.97■■■□□ 2.23
RARA-203ENST00000394086 DEFB132Q7Z7B7 95 aa28.96■■■□□ 2.23
RARA-203ENST00000394086 KIF16BQ96L93 1317 aa28.96■■■□□ 2.23
RARA-203ENST00000394086 DDX11L8A8MPP1 907 aa28.96■■■□□ 2.23
RARA-203ENST00000394086 HSP90AB1P08238 724 aaKnown RBP28.96■■■□□ 2.23
RARA-203ENST00000394086 AKAP4Q5JQC9 854 aa28.95■■■□□ 2.23
RARA-203ENST00000394086 TNNQ9UQP3 1299 aa28.95■■■□□ 2.23
RARA-203ENST00000394086 ATF7IPQ6VMQ6 1270 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 MPRIPQ6WCQ1 1025 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 GAS2L2Q8NHY3 880 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 ZNF428Q96B54 188 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 IPO8O15397 1037 aaKnown RBP28.94■■■□□ 2.22
RARA-203ENST00000394086 BAG6P46379 1132 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 DCAF5Q96JK2 942 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 BCL2L13Q9BXK5 485 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 SMC4Q9NTJ3 1288 aa28.94■■■□□ 2.22
RARA-203ENST00000394086 PTMSP20962 102 aa28.93■■■□□ 2.22
RARA-203ENST00000394086 SNX21Q969T3 373 aa28.93■■■□□ 2.22
RARA-203ENST00000394086 PLEKHF1Q96S99 279 aa28.93■■■□□ 2.22
RARA-203ENST00000394086 CHMP4BQ9H444 224 aaKnown RBP28.93■■■□□ 2.22
RARA-203ENST00000394086 HSCBQ8IWL3 235 aa28.93■■■□□ 2.22
RARA-203ENST00000394086 EN1Q05925 392 aaPredicted RBP28.92■■■□□ 2.22
RARA-203ENST00000394086 CIZ1Q9ULV3 898 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms