RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 IP6K1Q92551 441 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 ERBB3P21860 1342 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 NWD2Q9ULI1 1742 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 PNMA6EA0A0J9YXQ4 647 aa10.89□□□□□ -0.67
GAPVD1-204ENST00000394083 LAS1LQ9Y4W2 734 aaKnown RBP10.89□□□□□ -0.67
GAPVD1-204ENST00000394083 ANXA1P04083 346 aa10.89□□□□□ -0.67
GAPVD1-204ENST00000394083 MYH16Q9H6N6 1097 aa10.88□□□□□ -0.67
GAPVD1-204ENST00000394083 DCCP43146 1447 aa10.88□□□□□ -0.67
GAPVD1-204ENST00000394083 COL5A2P05997 1499 aaPredicted RBP10.88□□□□□ -0.67
GAPVD1-204ENST00000394083 ESCO1Q5FWF5 840 aa10.88□□□□□ -0.67
GAPVD1-204ENST00000394083 RREB1Q92766 1687 aa10.88□□□□□ -0.67
GAPVD1-204ENST00000394083 DOT1LQ8TEK3 1739 aa10.88□□□□□ -0.67
GAPVD1-204ENST00000394083 NUP98P52948 1817 aa10.88□□□□□ -0.67
GAPVD1-204ENST00000394083 ESF1Q9H501 851 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-204ENST00000394083 AKAP11Q9UKA4 1901 aa10.87□□□□□ -0.67
GAPVD1-204ENST00000394083 CT47B1P0C2W7 299 aaPredicted RBP10.87□□□□□ -0.67
GAPVD1-204ENST00000394083 MAP3K5Q99683 1374 aa10.87□□□□□ -0.67
GAPVD1-204ENST00000394083 CEP85Q6P2H3 762 aa10.87□□□□□ -0.67
GAPVD1-204ENST00000394083 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
GAPVD1-204ENST00000394083 ARHGAP45Q92619 1136 aa10.86□□□□□ -0.67
GAPVD1-204ENST00000394083 ANKRD36CQ5JPF3 1778 aa10.86□□□□□ -0.67
GAPVD1-204ENST00000394083 CYP27B1O15528 508 aa10.86□□□□□ -0.67
GAPVD1-204ENST00000394083 NGDNQ8NEJ9 315 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-204ENST00000394083 COL5A3P25940 1745 aaPredicted RBP10.86□□□□□ -0.67
GAPVD1-204ENST00000394083 FAM161AQ3B820 660 aa10.86□□□□□ -0.67
GAPVD1-204ENST00000394083 TSHZ3Q63HK5 1081 aa10.86□□□□□ -0.67
GAPVD1-204ENST00000394083 TBC1D32Q96NH3 1257 aa10.86□□□□□ -0.67
GAPVD1-204ENST00000394083 EIF4A1P60842 406 aaKnown RBP10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 UNC5CLQ8IV45 518 aa10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 ZNF428Q96B54 188 aa10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 USP44Q9H0E7 712 aa10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 LTV1Q96GA3 475 aaPredicted RBP10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 SMARCA5O60264 1052 aaPredicted RBP10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 LAMA2P24043 3122 aaKnown RBP10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 MAPK8IP3Q9UPT6 1336 aa10.85□□□□□ -0.67
GAPVD1-204ENST00000394083 TNS3Q68CZ2 1445 aa10.84□□□□□ -0.67
GAPVD1-204ENST00000394083 ITPRIPQ8IWB1 547 aa10.84□□□□□ -0.67
GAPVD1-204ENST00000394083 PLEKHM2Q8IWE5 1019 aa10.84□□□□□ -0.67
GAPVD1-204ENST00000394083 PXDNLA1KZ92 1463 aa10.84□□□□□ -0.67
GAPVD1-204ENST00000394083 SPEF2Q9C093 1822 aa10.84□□□□□ -0.67
GAPVD1-204ENST00000394083 NECTIN2Q92692 538 aa10.84□□□□□ -0.67
GAPVD1-204ENST00000394083 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-204ENST00000394083 LNPKQ9C0E8 428 aa10.83□□□□□ -0.68
GAPVD1-204ENST00000394083 MYH3P11055 1940 aa10.83□□□□□ -0.68
GAPVD1-204ENST00000394083 CHGBP05060 677 aa10.83□□□□□ -0.68
GAPVD1-204ENST00000394083 MPRIPQ6WCQ1 1025 aa10.82□□□□□ -0.68
GAPVD1-204ENST00000394083 NOP58Q9Y2X3 529 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-204ENST00000394083 SBF2Q86WG5 1849 aa10.82□□□□□ -0.68
GAPVD1-204ENST00000394083 GNAI1P63096 354 aa10.82□□□□□ -0.68
GAPVD1-204ENST00000394083 SPATA31A3Q5VYP0 1347 aa10.82□□□□□ -0.68
GAPVD1-204ENST00000394083 LAMB2P55268 1798 aa10.82□□□□□ -0.68
GAPVD1-204ENST00000394083 CHRNA2Q15822 529 aa10.82□□□□□ -0.68
GAPVD1-204ENST00000394083 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 OVOS2A0A0G2JMS6 1433 aa10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 CICQ96RK0 1608 aaPredicted RBP10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 PIP4K2AP48426 406 aaPredicted RBP10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 HDGFP51858 240 aaKnown RBP10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 DCTPP1Q9H773 170 aa10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 COL15A1P39059 1388 aa10.81□□□□□ -0.68
GAPVD1-204ENST00000394083 TBC1D2Q9BYX2 928 aa10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 CPDO75976 1380 aa10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 DISP2A7MBM2 1401 aa10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 KRT28Q7Z3Y7 464 aa10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 TNS2Q63HR2 1409 aa10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 SLC4A9Q96Q91 983 aa10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 C19orf44Q9H6X5 657 aa10.8□□□□□ -0.68
GAPVD1-204ENST00000394083 CHD1LQ86WJ1 897 aa10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 KIF16BQ96L93 1317 aa10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 ANKRD24Q8TF21 1146 aa10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 ANKRD44Q8N8A2 993 aa10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 ECM29Q5VYK3 1845 aa10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 SOS1Q07889 1333 aaPredicted RBP10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 IGKV5-2P06315 115 aa10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 TAF1LQ8IZX4 1826 aa10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 AHDC1Q5TGY3 1603 aaPredicted RBP10.79□□□□□ -0.68
GAPVD1-204ENST00000394083 GNAT3A8MTJ3 354 aa10.78□□□□□ -0.68
GAPVD1-204ENST00000394083 EPHA10Q5JZY3 1008 aa10.78□□□□□ -0.68
GAPVD1-204ENST00000394083 CHAMP1Q96JM3 812 aa10.78□□□□□ -0.68
GAPVD1-204ENST00000394083 CHPF2Q9P2E5 772 aa10.78□□□□□ -0.68
GAPVD1-204ENST00000394083 SLC39A6Q13433 755 aa10.78□□□□□ -0.68
GAPVD1-204ENST00000394083 DDX19BQ9UMR2 479 aa10.78□□□□□ -0.68
GAPVD1-204ENST00000394083 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
GAPVD1-204ENST00000394083 BEND3Q5T5X7 828 aa10.78□□□□□ -0.68
GAPVD1-204ENST00000394083 LRP6O75581 1613 aa10.77□□□□□ -0.68
GAPVD1-204ENST00000394083 FLIIQ13045 1269 aa10.77□□□□□ -0.69
GAPVD1-204ENST00000394083 TBC1D9Q6ZT07 1266 aa10.77□□□□□ -0.69
GAPVD1-204ENST00000394083 MYH7P12883 1935 aa10.76□□□□□ -0.69
GAPVD1-204ENST00000394083 RNMTO43148 476 aaKnown RBP10.76□□□□□ -0.69
GAPVD1-204ENST00000394083 BCORQ6W2J9 1755 aa10.76□□□□□ -0.69
GAPVD1-204ENST00000394083 MYH15Q9Y2K3 1946 aa10.76□□□□□ -0.69
GAPVD1-204ENST00000394083 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
GAPVD1-204ENST00000394083 AMPHP49418 695 aa10.76□□□□□ -0.69
GAPVD1-204ENST00000394083 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
GAPVD1-204ENST00000394083 NBPF10Q6P3W6 841 aaKnown RBP10.76□□□□□ -0.69
GAPVD1-204ENST00000394083 NBPF15Q8N660 670 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms