RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 RGPD2P0DJD1 1756 aa18.22■□□□□ 0.51
CDH16-202ENST00000394055 FAM208AQ9UK61 1670 aaKnown RBP18.22■□□□□ 0.51
CDH16-202ENST00000394055 GNAI2P04899 355 aa18.22■□□□□ 0.51
CDH16-202ENST00000394055 HMMRO75330 724 aa18.22■□□□□ 0.51
CDH16-202ENST00000394055 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
CDH16-202ENST00000394055 PHAXQ9H814 394 aaKnown RBP18.22■□□□□ 0.51
CDH16-202ENST00000394055 EXOC6BQ9Y2D4 811 aa18.22■□□□□ 0.51
CDH16-202ENST00000394055 KCNQ3O43525 872 aa18.21■□□□□ 0.51
CDH16-202ENST00000394055 MPRIPQ6WCQ1 1025 aa18.21■□□□□ 0.51
CDH16-202ENST00000394055 KIF2CQ99661 725 aa18.21■□□□□ 0.51
CDH16-202ENST00000394055 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
CDH16-202ENST00000394055 ARHGEF25Q86VW2 580 aa18.19■□□□□ 0.5
CDH16-202ENST00000394055 KRT28Q7Z3Y7 464 aa18.19■□□□□ 0.5
CDH16-202ENST00000394055 CEMIPQ8WUJ3 1361 aa18.19■□□□□ 0.5
CDH16-202ENST00000394055 PNMA6EA0A0J9YXQ4 647 aa18.18■□□□□ 0.5
CDH16-202ENST00000394055 SDSP20132 328 aa18.18■□□□□ 0.5
CDH16-202ENST00000394055 ANKRD24Q8TF21 1146 aa18.18■□□□□ 0.5
CDH16-202ENST00000394055 CD2BP2O95400 341 aaKnown RBP18.18■□□□□ 0.5
CDH16-202ENST00000394055 TEFQ10587 303 aa18.18■□□□□ 0.5
CDH16-202ENST00000394055 ANXA1P04083 346 aa18.18■□□□□ 0.5
CDH16-202ENST00000394055 TSHZ3Q63HK5 1081 aa18.18■□□□□ 0.5
CDH16-202ENST00000394055 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
CDH16-202ENST00000394055 AXIN2Q9Y2T1 843 aa18.18■□□□□ 0.5
CDH16-202ENST00000394055 LRRFIP2Q9Y608 721 aaKnown RBP18.18■□□□□ 0.5
CDH16-202ENST00000394055 GNAI3P08754 354 aa18.17■□□□□ 0.5
CDH16-202ENST00000394055 EIF4A1P60842 406 aaKnown RBP18.17■□□□□ 0.5
CDH16-202ENST00000394055 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
CDH16-202ENST00000394055 DDX17Q92841 729 aaKnown RBP18.17■□□□□ 0.5
CDH16-202ENST00000394055 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
CDH16-202ENST00000394055 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
CDH16-202ENST00000394055 CHPF2Q9P2E5 772 aa18.16■□□□□ 0.5
CDH16-202ENST00000394055 BTBD11A6QL63 1104 aa18.16■□□□□ 0.5
CDH16-202ENST00000394055 FOXD4L1Q9NU39 408 aa18.16■□□□□ 0.5
CDH16-202ENST00000394055 PXDNQ92626 1479 aa18.15■□□□□ 0.5
CDH16-202ENST00000394055 GLIPR1L2Q4G1C9 344 aa18.15■□□□□ 0.5
CDH16-202ENST00000394055 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
CDH16-202ENST00000394055 CHMP5Q9NZZ3 219 aa18.15■□□□□ 0.5
CDH16-202ENST00000394055 SNX21Q969T3 373 aa18.15■□□□□ 0.5
CDH16-202ENST00000394055 USP44Q9H0E7 712 aa18.15■□□□□ 0.5
CDH16-202ENST00000394055 C1orf141Q5JVX7 400 aa18.14■□□□□ 0.5
CDH16-202ENST00000394055 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
CDH16-202ENST00000394055 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
CDH16-202ENST00000394055 UBTFL1P0CB47 393 aaPredicted RBP18.13■□□□□ 0.49
CDH16-202ENST00000394055 PDE1AP54750 535 aa18.13■□□□□ 0.49
CDH16-202ENST00000394055 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
CDH16-202ENST00000394055 C1orf167Q5SNV9 1468 aa18.13■□□□□ 0.49
CDH16-202ENST00000394055 C19orf44Q9H6X5 657 aa18.13■□□□□ 0.49
CDH16-202ENST00000394055 SLIT3O75094 1523 aa18.12■□□□□ 0.49
CDH16-202ENST00000394055 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
CDH16-202ENST00000394055 LRRCC1Q9C099 1032 aa18.12■□□□□ 0.49
CDH16-202ENST00000394055 MED1Q15648 1581 aaPredicted RBP18.11■□□□□ 0.49
CDH16-202ENST00000394055 HSP90AA1P07900 732 aaKnown RBP18.11■□□□□ 0.49
CDH16-202ENST00000394055 AMOTQ4VCS5 1084 aa18.11■□□□□ 0.49
CDH16-202ENST00000394055 PI4KAP2A4QPH2 592 aa18.11■□□□□ 0.49
CDH16-202ENST00000394055 PI4KAP1Q8N8J0 262 aa18.11■□□□□ 0.49
CDH16-202ENST00000394055 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
CDH16-202ENST00000394055 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
CDH16-202ENST00000394055 CASC1Q6TDU7 716 aa18.1■□□□□ 0.49
CDH16-202ENST00000394055 PHRF1Q9P1Y6 1649 aaKnown RBP18.1■□□□□ 0.49
CDH16-202ENST00000394055 USP26Q9BXU7 913 aa18.1■□□□□ 0.49
CDH16-202ENST00000394055 NCOA3Q9Y6Q9 1424 aa18.1■□□□□ 0.49
CDH16-202ENST00000394055 PRAMEF22A3QJZ6 481 aa18.09■□□□□ 0.49
CDH16-202ENST00000394055 MCM4P33991 863 aa18.09■□□□□ 0.49
CDH16-202ENST00000394055 LMO7Q8WWI1 1683 aa18.09■□□□□ 0.49
CDH16-202ENST00000394055 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
CDH16-202ENST00000394055 K7ELQ4 463 aaPredicted RBP18.08■□□□□ 0.49
CDH16-202ENST00000394055 ATF3P18847 181 aa18.08■□□□□ 0.49
CDH16-202ENST00000394055 ZMYND15Q9H091 742 aa18.08■□□□□ 0.49
CDH16-202ENST00000394055 IL1RAPL2Q9NP60 686 aa18.08■□□□□ 0.49
CDH16-202ENST00000394055 KDM3BQ7LBC6 1761 aa18.08■□□□□ 0.49
CDH16-202ENST00000394055 NBPF7P0C2Y1 421 aaPredicted RBP18.08■□□□□ 0.48
CDH16-202ENST00000394055 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.48
CDH16-202ENST00000394055 IBTKQ9P2D0 1353 aaPredicted RBP18.08■□□□□ 0.48
CDH16-202ENST00000394055 PXDNLA1KZ92 1463 aa18.08■□□□□ 0.48
CDH16-202ENST00000394055 DNAAF4Q8WXU2 420 aa18.08■□□□□ 0.48
CDH16-202ENST00000394055 MX1P20591 662 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 PPP1R42Q7Z4L9 355 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 OSBPL3Q9H4L5 887 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 NLRP2Q9NX02 1062 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 TMEM94Q12767 1356 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 RGPD5Q99666 1765 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 ERBB3P21860 1342 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 DDIT3P35638 169 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 PROSER3Q2NL68 480 aa18.07■□□□□ 0.48
CDH16-202ENST00000394055 HOXB7P09629 217 aa18.06■□□□□ 0.48
CDH16-202ENST00000394055 SALL3Q9BXA9 1300 aa18.06■□□□□ 0.48
CDH16-202ENST00000394055 BEND3Q5T5X7 828 aa18.06■□□□□ 0.48
CDH16-202ENST00000394055 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
CDH16-202ENST00000394055 RILPL2Q969X0 211 aa18.05■□□□□ 0.48
CDH16-202ENST00000394055 NCAPD2Q15021 1401 aa18.05■□□□□ 0.48
CDH16-202ENST00000394055 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
CDH16-202ENST00000394055 SURF6O75683 361 aaKnown RBP18.05■□□□□ 0.48
CDH16-202ENST00000394055 ADCY9O60503 1353 aa18.05■□□□□ 0.48
CDH16-202ENST00000394055 SRGAP3O43295 1099 aa18.04■□□□□ 0.48
CDH16-202ENST00000394055 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
CDH16-202ENST00000394055 NUTM1Q86Y26 1132 aa18.04■□□□□ 0.48
CDH16-202ENST00000394055 ERC2O15083 957 aa18.04■□□□□ 0.48
CDH16-202ENST00000394055 RABEP1Q15276 862 aa18.04■□□□□ 0.48
CDH16-202ENST00000394055 SSH3Q8TE77 659 aa18.04■□□□□ 0.48
CDH16-202ENST00000394055 GZF1Q9H116 711 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms