RNA–Protein interactions for RNA: ENST00000393412.7

MDM2-209, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-209ENST00000393412 LINC00116Q8NCU8 138 aa21.78■■□□□ 1.08
MDM2-209ENST00000393412 DCAF5Q96JK2 942 aa21.78■■□□□ 1.08
MDM2-209ENST00000393412 CD2APQ9Y5K6 639 aa21.78■■□□□ 1.08
MDM2-209ENST00000393412 NPC1L1Q9UHC9 1359 aa21.77■■□□□ 1.08
MDM2-209ENST00000393412 GNPATO15228 680 aa21.77■■□□□ 1.08
MDM2-209ENST00000393412 GRIN3BO60391 1043 aa21.77■■□□□ 1.08
MDM2-209ENST00000393412 ATG3Q9NT62 314 aa21.77■■□□□ 1.08
MDM2-209ENST00000393412 C1orf141Q5JVX7 400 aa21.76■■□□□ 1.07
MDM2-209ENST00000393412 RBM42Q9BTD8 480 aaKnown RBP21.76■■□□□ 1.07
MDM2-209ENST00000393412 CABP4P57796 275 aa21.75■■□□□ 1.07
MDM2-209ENST00000393412 SMIM5Q71RC9 77 aa21.75■■□□□ 1.07
MDM2-209ENST00000393412 ITPK1Q13572 414 aa21.74■■□□□ 1.07
MDM2-209ENST00000393412 AMIGO3Q86WK7 504 aa21.74■■□□□ 1.07
MDM2-209ENST00000393412 MTHFSP49914 203 aa21.73■■□□□ 1.07
MDM2-209ENST00000393412 SULT6B1Q6IMI4 303 aa21.72■■□□□ 1.07
MDM2-209ENST00000393412 AEBP1Q8IUX7 1158 aa21.72■■□□□ 1.07
MDM2-209ENST00000393412 YBX3P16989 372 aaKnown RBP eCLIP21.72■■□□□ 1.078e-7■■□□□ 12.2
MDM2-209ENST00000393412 UTRNP46939 3433 aa21.71■■□□□ 1.07
MDM2-209ENST00000393412 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
MDM2-209ENST00000393412 RTCBQ9Y3I0 505 aaKnown RBP21.71■■□□□ 1.07
MDM2-209ENST00000393412 UBR3Q6ZT12 1888 aa21.7■■□□□ 1.06
MDM2-209ENST00000393412 CC2D1BQ5T0F9 858 aaKnown RBP21.7■■□□□ 1.06
MDM2-209ENST00000393412 TRAPPC3LQ5T215 181 aa21.7■■□□□ 1.06
MDM2-209ENST00000393412 IL13P35225 146 aa21.69■■□□□ 1.06
MDM2-209ENST00000393412 KDRP35968 1356 aa21.68■■□□□ 1.06
MDM2-209ENST00000393412 KDM6AO15550 1401 aaPredicted RBP21.66■■□□□ 1.06
MDM2-209ENST00000393412 PTCD1O75127 700 aaKnown RBP21.66■■□□□ 1.06
MDM2-209ENST00000393412 NFATC2IPQ8NCF5 419 aa21.66■■□□□ 1.06
MDM2-209ENST00000393412 RC3H1Q5TC82 1133 aaKnown RBP21.65■■□□□ 1.06
MDM2-209ENST00000393412 MMP10P09238 476 aa21.64■■□□□ 1.06
MDM2-209ENST00000393412 ADRA2BP18089 450 aa21.64■■□□□ 1.06
MDM2-209ENST00000393412 RFC4P35249 363 aa21.64■■□□□ 1.06
MDM2-209ENST00000393412 NLGN1Q8N2Q7 840 aa21.64■■□□□ 1.06
MDM2-209ENST00000393412 SLC4A9Q96Q91 983 aa21.64■■□□□ 1.06
MDM2-209ENST00000393412 GIGYF1O75420 1035 aaPredicted RBP21.63■■□□□ 1.05
MDM2-209ENST00000393412 WWC3Q9ULE0 1092 aa21.63■■□□□ 1.05
MDM2-209ENST00000393412 CNTNAP4Q9C0A0 1308 aa21.63■■□□□ 1.05
MDM2-209ENST00000393412 C1QTNF8P60827 252 aa21.63■■□□□ 1.05
MDM2-209ENST00000393412 RPS6KA4O75676 772 aa21.62■■□□□ 1.05
MDM2-209ENST00000393412 AKAP4Q5JQC9 854 aa21.62■■□□□ 1.05
MDM2-209ENST00000393412 ARHGEF1Q92888 912 aaKnown RBP21.62■■□□□ 1.05
MDM2-209ENST00000393412 HMOX1P09601 288 aa21.61■■□□□ 1.05
MDM2-209ENST00000393412 CNGB1Q14028 1251 aaPredicted RBP21.61■■□□□ 1.05
MDM2-209ENST00000393412 GOLGB1Q14789 3259 aaKnown RBP21.6■■□□□ 1.05
MDM2-209ENST00000393412 DIAPH1O60610 1272 aaKnown RBP21.6■■□□□ 1.05
MDM2-209ENST00000393412 ZNF831Q5JPB2 1677 aa21.59■■□□□ 1.05
MDM2-209ENST00000393412 SENP3-EIF4A1A0A087X0R7 540 aa21.58■■□□□ 1.05
MDM2-209ENST00000393412 CRKLP46109 303 aaKnown RBP21.58■■□□□ 1.05
MDM2-209ENST00000393412 PARP3Q9Y6F1 533 aa21.58■■□□□ 1.05
MDM2-209ENST00000393412 CCDC87Q9NVE4 849 aa21.57■■□□□ 1.04
MDM2-209ENST00000393412 COL3A1P02461 1466 aaPredicted RBP21.57■■□□□ 1.04
MDM2-209ENST00000393412 SLC52A2Q9HAB3 445 aa21.56■■□□□ 1.04
MDM2-209ENST00000393412 GYS1P13807 737 aa21.55■■□□□ 1.04
MDM2-209ENST00000393412 TGFB2P61812 414 aa21.55■■□□□ 1.04
MDM2-209ENST00000393412 LGR6Q9HBX8 967 aa21.55■■□□□ 1.04
MDM2-209ENST00000393412 COL5A3P25940 1745 aaPredicted RBP21.55■■□□□ 1.04
MDM2-209ENST00000393412 RNMTO43148 476 aaKnown RBP21.54■■□□□ 1.04
MDM2-209ENST00000393412 GPBP1L1Q9HC44 474 aaPredicted RBP21.54■■□□□ 1.04
MDM2-209ENST00000393412 ATP10DQ9P241 1426 aa21.53■■□□□ 1.04
MDM2-209ENST00000393412 CICQ96RK0 1608 aaPredicted RBP21.53■■□□□ 1.04
MDM2-209ENST00000393412 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
MDM2-209ENST00000393412 SCN11AQ9UI33 1791 aa21.52■■□□□ 1.04
MDM2-209ENST00000393412 A0A0G2JLW4 131 aa21.52■■□□□ 1.04
MDM2-209ENST00000393412 MTHFSDQ2M296 383 aaKnown RBP21.52■■□□□ 1.04
MDM2-209ENST00000393412 ZNF526Q8TF50 670 aaPredicted RBP21.51■■□□□ 1.03
MDM2-209ENST00000393412 CFAP53Q96M91 514 aa21.51■■□□□ 1.03
MDM2-209ENST00000393412 BCS1LQ9Y276 419 aa21.51■■□□□ 1.03
MDM2-209ENST00000393412 ZPR1O75312 459 aa21.5■■□□□ 1.03
MDM2-209ENST00000393412 SLC39A6Q13433 755 aa21.5■■□□□ 1.03
MDM2-209ENST00000393412 DNAJC10Q8IXB1 793 aa21.5■■□□□ 1.03
MDM2-209ENST00000393412 SRP68Q9UHB9 627 aaKnown RBP21.5■■□□□ 1.03
MDM2-209ENST00000393412 PXDNLA1KZ92 1463 aa21.49■■□□□ 1.03
MDM2-209ENST00000393412 PPP2R1AP30153 589 aa21.49■■□□□ 1.03
MDM2-209ENST00000393412 USP42Q9H9J4 1324 aaKnown RBP21.49■■□□□ 1.03
MDM2-209ENST00000393412 MYH14Q7Z406 1995 aaKnown RBP21.49■■□□□ 1.03
MDM2-209ENST00000393412 C10orf71Q711Q0 1435 aa21.49■■□□□ 1.03
MDM2-209ENST00000393412 INTS5Q6P9B9 1019 aaKnown RBP21.48■■□□□ 1.03
MDM2-209ENST00000393412 DPEP1P16444 411 aa21.47■■□□□ 1.03
MDM2-209ENST00000393412 FKBP8Q14318 412 aa21.47■■□□□ 1.03
MDM2-209ENST00000393412 TTC5Q8N0Z6 440 aa21.47■■□□□ 1.03
MDM2-209ENST00000393412 C4AP0C0L4 1744 aa21.47■■□□□ 1.03
MDM2-209ENST00000393412 FCHSD2O94868 740 aa21.46■■□□□ 1.03
MDM2-209ENST00000393412 ARHGAP27Q6ZUM4 889 aa21.46■■□□□ 1.03
MDM2-209ENST00000393412 GAS2L2Q8NHY3 880 aa21.46■■□□□ 1.03
MDM2-209ENST00000393412 TJP1Q07157 1748 aa21.45■■□□□ 1.02
MDM2-209ENST00000393412 ADCY9O60503 1353 aa21.45■■□□□ 1.02
MDM2-209ENST00000393412 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
MDM2-209ENST00000393412 MRC1P22897 1456 aa21.45■■□□□ 1.02
MDM2-209ENST00000393412 TEFQ10587 303 aa21.45■■□□□ 1.02
MDM2-209ENST00000393412 NUDCQ9Y266 331 aa21.45■■□□□ 1.02
MDM2-209ENST00000393412 KIF13BQ9NQT8 1826 aa21.44■■□□□ 1.02
MDM2-209ENST00000393412 N4BP2Q86UW6 1770 aaPredicted RBP21.44■■□□□ 1.02
MDM2-209ENST00000393412 ADAMTS7Q9UKP4 1686 aa21.44■■□□□ 1.02
MDM2-209ENST00000393412 GNAT3A8MTJ3 354 aa21.44■■□□□ 1.02
MDM2-209ENST00000393412 USPL1Q5W0Q7 1092 aa21.44■■□□□ 1.02
MDM2-209ENST00000393412 VSIG10Q8N0Z9 540 aa21.44■■□□□ 1.02
MDM2-209ENST00000393412 SOS1Q07889 1333 aaPredicted RBP21.43■■□□□ 1.02
MDM2-209ENST00000393412 PIM2Q9P1W9 311 aa21.43■■□□□ 1.02
MDM2-209ENST00000393412 VIRMAQ69YN4 1812 aaKnown RBP21.42■■□□□ 1.02
MDM2-209ENST00000393412 STARD3NLO95772 234 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms