RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 EIF4A1P60842 406 aaKnown RBP25.56■■□□□ 1.68
ME3-202ENST00000393324 PRDM11Q9NQV5 511 aa25.56■■□□□ 1.68
ME3-202ENST00000393324 C8orf34Q49A92 452 aa25.55■■□□□ 1.68
ME3-202ENST00000393324 NHSL1Q5SYE7 1610 aa25.55■■□□□ 1.68
ME3-202ENST00000393324 MEGF6O75095 1541 aa25.54■■□□□ 1.68
ME3-202ENST00000393324 KCNQ3O43525 872 aa25.53■■□□□ 1.68
ME3-202ENST00000393324 HDGFL1Q5TGJ6 251 aa25.53■■□□□ 1.68
ME3-202ENST00000393324 SPG7Q9UQ90 795 aa25.53■■□□□ 1.68
ME3-202ENST00000393324 ANP32AP39687 249 aaKnown RBP25.53■■□□□ 1.68
ME3-202ENST00000393324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.53■■□□□ 1.68
ME3-202ENST00000393324 FLIIQ13045 1269 aa25.52■■□□□ 1.68
ME3-202ENST00000393324 F6X3S4 739 aa25.51■■□□□ 1.67
ME3-202ENST00000393324 ADAMTS7Q9UKP4 1686 aa25.51■■□□□ 1.67
ME3-202ENST00000393324 ABCA3Q99758 1704 aa25.51■■□□□ 1.67
ME3-202ENST00000393324 HOXB7P09629 217 aa25.51■■□□□ 1.67
ME3-202ENST00000393324 SLC4A10Q6U841 1118 aa25.51■■□□□ 1.67
ME3-202ENST00000393324 SIRT2Q8IXJ6 389 aa25.5■■□□□ 1.67
ME3-202ENST00000393324 SIPA1L3O60292 1781 aaPredicted RBP25.5■■□□□ 1.67
ME3-202ENST00000393324 FKBP5Q13451 457 aaPredicted RBP25.49■■□□□ 1.67
ME3-202ENST00000393324 PLEKHG2Q9H7P9 1386 aa25.49■■□□□ 1.67
ME3-202ENST00000393324 PHKG2P15735 406 aa25.49■■□□□ 1.67
ME3-202ENST00000393324 NPM2Q86SE8 214 aaKnown RBP25.49■■□□□ 1.67
ME3-202ENST00000393324 EIF2S2P20042 333 aaKnown RBP25.48■■□□□ 1.67
ME3-202ENST00000393324 CCT4P50991 539 aaKnown RBP25.48■■□□□ 1.67
ME3-202ENST00000393324 WDR17Q8IZU2 1322 aa25.48■■□□□ 1.67
ME3-202ENST00000393324 IFNL2Q8IZJ0 200 aa25.47■■□□□ 1.67
ME3-202ENST00000393324 CHMP4AQ9BY43 222 aa25.47■■□□□ 1.67
ME3-202ENST00000393324 SCN11AQ9UI33 1791 aa25.47■■□□□ 1.67
ME3-202ENST00000393324 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
ME3-202ENST00000393324 NUCB1Q02818 461 aa25.46■■□□□ 1.67
ME3-202ENST00000393324 MEIS3Q99687 375 aa25.46■■□□□ 1.67
ME3-202ENST00000393324 TOM1L2Q6ZVM7 507 aa25.45■■□□□ 1.67
ME3-202ENST00000393324 KDM6AO15550 1401 aaPredicted RBP25.45■■□□□ 1.66
ME3-202ENST00000393324 COL5A2P05997 1499 aaPredicted RBP25.45■■□□□ 1.66
ME3-202ENST00000393324 PKD1L3Q7Z443 1732 aa25.45■■□□□ 1.66
ME3-202ENST00000393324 ERICH6Q7L0X2 663 aa25.44■■□□□ 1.66
ME3-202ENST00000393324 CYP27B1O15528 508 aa25.43■■□□□ 1.66
ME3-202ENST00000393324 PHAXQ9H814 394 aaKnown RBP25.43■■□□□ 1.66
ME3-202ENST00000393324 SLC52A2Q9HAB3 445 aa25.43■■□□□ 1.66
ME3-202ENST00000393324 CHD1LQ86WJ1 897 aa25.43■■□□□ 1.66
ME3-202ENST00000393324 CHPF2Q9P2E5 772 aa25.43■■□□□ 1.66
ME3-202ENST00000393324 ATP10DQ9P241 1426 aa25.42■■□□□ 1.66
ME3-202ENST00000393324 HEG1Q9ULI3 1381 aa25.41■■□□□ 1.66
ME3-202ENST00000393324 GIGYF1O75420 1035 aaPredicted RBP25.41■■□□□ 1.66
ME3-202ENST00000393324 RPAP2Q8IXW5 612 aaPredicted RBP25.41■■□□□ 1.66
ME3-202ENST00000393324 ANKRD44Q8N8A2 993 aa25.41■■□□□ 1.66
ME3-202ENST00000393324 LNPKQ9C0E8 428 aa25.41■■□□□ 1.66
ME3-202ENST00000393324 DCAF5Q96JK2 942 aa25.41■■□□□ 1.66
ME3-202ENST00000393324 ANKRD45Q5TZF3 282 aa25.4■■□□□ 1.66
ME3-202ENST00000393324 NFATC2IPQ8NCF5 419 aa25.4■■□□□ 1.66
ME3-202ENST00000393324 IPO9Q96P70 1041 aaKnown RBP25.4■■□□□ 1.66
ME3-202ENST00000393324 ROBO1Q9Y6N7 1651 aa25.4■■□□□ 1.66
ME3-202ENST00000393324 CEP85Q6P2H3 762 aa25.4■■□□□ 1.66
ME3-202ENST00000393324 HSP90AB1P08238 724 aaKnown RBP25.39■■□□□ 1.65
ME3-202ENST00000393324 STRN4Q9NRL3 753 aa25.39■■□□□ 1.65
ME3-202ENST00000393324 PARP4Q9UKK3 1724 aaKnown RBP25.38■■□□□ 1.65
ME3-202ENST00000393324 EVA1CP58658 441 aa25.38■■□□□ 1.65
ME3-202ENST00000393324 ZNF790Q6PG37 636 aa25.38■■□□□ 1.65
ME3-202ENST00000393324 CARD10Q9BWT7 1032 aa25.38■■□□□ 1.65
ME3-202ENST00000393324 SLC39A6Q13433 755 aa25.37■■□□□ 1.65
ME3-202ENST00000393324 PXDNLA1KZ92 1463 aa25.37■■□□□ 1.65
ME3-202ENST00000393324 DBF4Q9UBU7 674 aaPredicted RBP25.37■■□□□ 1.65
ME3-202ENST00000393324 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
ME3-202ENST00000393324 LTBP4Q8N2S1 1624 aa25.37■■□□□ 1.65
ME3-202ENST00000393324 DCTPP1Q9H773 170 aa25.36■■□□□ 1.65
ME3-202ENST00000393324 PRAMEF22A3QJZ6 481 aa25.36■■□□□ 1.65
ME3-202ENST00000393324 LARP1Q6PKG0 1096 aaKnown RBP25.36■■□□□ 1.65
ME3-202ENST00000393324 ANXA1P04083 346 aa25.35■■□□□ 1.65
ME3-202ENST00000393324 ZCRB1Q8TBF4 217 aaKnown RBP25.35■■□□□ 1.65
ME3-202ENST00000393324 GNAI2P04899 355 aa25.34■■□□□ 1.65
ME3-202ENST00000393324 MRC1P22897 1456 aa25.34■■□□□ 1.65
ME3-202ENST00000393324 GNAI3P08754 354 aa25.33■■□□□ 1.65
ME3-202ENST00000393324 IL2RBP14784 551 aa25.33■■□□□ 1.65
ME3-202ENST00000393324 PCDH11XQ9BZA7 1347 aa25.33■■□□□ 1.64
ME3-202ENST00000393324 PCDH11YQ9BZA8 1340 aa25.33■■□□□ 1.64
ME3-202ENST00000393324 AHDC1Q5TGY3 1603 aaPredicted RBP25.32■■□□□ 1.64
ME3-202ENST00000393324 PI4KAP2A4QPH2 592 aa25.31■■□□□ 1.64
ME3-202ENST00000393324 CABP4P57796 275 aa25.31■■□□□ 1.64
ME3-202ENST00000393324 PI4KAP1Q8N8J0 262 aa25.31■■□□□ 1.64
ME3-202ENST00000393324 SEC24BO95487 1268 aa25.31■■□□□ 1.64
ME3-202ENST00000393324 HMMRO75330 724 aa25.3■■□□□ 1.64
ME3-202ENST00000393324 PROSER3Q2NL68 480 aa25.3■■□□□ 1.64
ME3-202ENST00000393324 DNAAF4Q8WXU2 420 aa25.3■■□□□ 1.64
ME3-202ENST00000393324 TTC5Q8N0Z6 440 aa25.29■■□□□ 1.64
ME3-202ENST00000393324 SRCIN1Q9C0H9 1055 aa25.29■■□□□ 1.64
ME3-202ENST00000393324 USP44Q9H0E7 712 aa25.29■■□□□ 1.64
ME3-202ENST00000393324 BTG4Q9NY30 223 aa25.29■■□□□ 1.64
ME3-202ENST00000393324 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
ME3-202ENST00000393324 HYPKQ9NX55 129 aa25.28■■□□□ 1.64
ME3-202ENST00000393324 C5P01031 1676 aa25.27■■□□□ 1.64
ME3-202ENST00000393324 ADCY9O60503 1353 aa25.27■■□□□ 1.64
ME3-202ENST00000393324 USP35Q9P2H5 1018 aa25.27■■□□□ 1.64
ME3-202ENST00000393324 ZBTB47Q9UFB7 747 aaPredicted RBP25.27■■□□□ 1.64
ME3-202ENST00000393324 NOP58Q9Y2X3 529 aaKnown RBP25.27■■□□□ 1.64
ME3-202ENST00000393324 DDX21Q9NR30 783 aaKnown RBP eCLIP25.27■■□□□ 1.64
ME3-202ENST00000393324 BEND3Q5T5X7 828 aa25.26■■□□□ 1.63
ME3-202ENST00000393324 UBTFL1P0CB47 393 aaPredicted RBP25.25■■□□□ 1.63
ME3-202ENST00000393324 COL22A1Q8NFW1 1626 aaPredicted RBP25.25■■□□□ 1.63
ME3-202ENST00000393324 DDX54Q8TDD1 881 aaKnown RBP25.25■■□□□ 1.63
ME3-202ENST00000393324 LRRFIP2Q9Y608 721 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms