RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 FAM9BQ8IZU0 186 aa17.46■□□□□ 0.39
USP44-202ENST00000393091 WWC1Q8IX03 1113 aa17.46■□□□□ 0.39
USP44-202ENST00000393091 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
USP44-202ENST00000393091 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
USP44-202ENST00000393091 ZBED9Q6R2W3 1325 aa17.45■□□□□ 0.38
USP44-202ENST00000393091 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
USP44-202ENST00000393091 COL24A1Q17RW2 1714 aa17.44■□□□□ 0.38
USP44-202ENST00000393091 CHL1O00533 1208 aa17.42■□□□□ 0.38
USP44-202ENST00000393091 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
USP44-202ENST00000393091 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
USP44-202ENST00000393091 PLSCR1O15162 318 aa17.41■□□□□ 0.38
USP44-202ENST00000393091 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
USP44-202ENST00000393091 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
USP44-202ENST00000393091 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
USP44-202ENST00000393091 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
USP44-202ENST00000393091 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
USP44-202ENST00000393091 VSIG10Q8N0Z9 540 aa17.4■□□□□ 0.38
USP44-202ENST00000393091 TUBGCP6Q96RT7 1819 aa17.39■□□□□ 0.37
USP44-202ENST00000393091 PIGBQ92521 554 aa17.39■□□□□ 0.37
USP44-202ENST00000393091 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
USP44-202ENST00000393091 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
USP44-202ENST00000393091 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
USP44-202ENST00000393091 UBR3Q6ZT12 1888 aa17.38■□□□□ 0.37
USP44-202ENST00000393091 GNAI1P63096 354 aa17.38■□□□□ 0.37
USP44-202ENST00000393091 HOXB7P09629 217 aa17.37■□□□□ 0.37
USP44-202ENST00000393091 CABP4P57796 275 aa17.37■□□□□ 0.37
USP44-202ENST00000393091 MCM10Q7L590 875 aa17.37■□□□□ 0.37
USP44-202ENST00000393091 TMOD3Q9NYL9 352 aa17.37■□□□□ 0.37
USP44-202ENST00000393091 ATG3Q9NT62 314 aa17.36■□□□□ 0.37
USP44-202ENST00000393091 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
USP44-202ENST00000393091 PRIM1P49642 420 aaKnown RBP17.35■□□□□ 0.37
USP44-202ENST00000393091 SLFN5Q08AF3 891 aa17.35■□□□□ 0.37
USP44-202ENST00000393091 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
USP44-202ENST00000393091 E9PSI1 815 aa17.34■□□□□ 0.37
USP44-202ENST00000393091 TEFQ10587 303 aa17.34■□□□□ 0.37
USP44-202ENST00000393091 SLC27A3Q5K4L6 730 aa17.34■□□□□ 0.37
USP44-202ENST00000393091 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
USP44-202ENST00000393091 ZNF790Q6PG37 636 aa17.34■□□□□ 0.37
USP44-202ENST00000393091 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
USP44-202ENST00000393091 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
USP44-202ENST00000393091 PALLDQ8WX93 1383 aa17.33■□□□□ 0.36
USP44-202ENST00000393091 KCNQ2O43526 872 aa17.32■□□□□ 0.36
USP44-202ENST00000393091 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
USP44-202ENST00000393091 DCTN1Q14203 1278 aa17.32■□□□□ 0.36
USP44-202ENST00000393091 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
USP44-202ENST00000393091 A0A0G2JS52 829 aa17.31■□□□□ 0.36
USP44-202ENST00000393091 BTBD11A6QL63 1104 aa17.31■□□□□ 0.36
USP44-202ENST00000393091 MYT1Q01538 1121 aa17.31■□□□□ 0.36
USP44-202ENST00000393091 MYH16Q9H6N6 1097 aa17.31■□□□□ 0.36
USP44-202ENST00000393091 SCN7AQ01118 1682 aa17.31■□□□□ 0.36
USP44-202ENST00000393091 CASZ1Q86V15 1759 aa17.31■□□□□ 0.36
USP44-202ENST00000393091 MYH14Q7Z406 1995 aaKnown RBP17.31■□□□□ 0.36
USP44-202ENST00000393091 CAMKK2Q96RR4 588 aa17.3■□□□□ 0.36
USP44-202ENST00000393091 MBIPQ9NS73 344 aa17.3■□□□□ 0.36
USP44-202ENST00000393091 ERBB4Q15303 1308 aa17.3■□□□□ 0.36
USP44-202ENST00000393091 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
USP44-202ENST00000393091 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
USP44-202ENST00000393091 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
USP44-202ENST00000393091 ILDR2Q71H61 639 aa17.29■□□□□ 0.36
USP44-202ENST00000393091 UPF1Q92900 1129 aaKnown RBP eCLIP17.29■□□□□ 0.36
USP44-202ENST00000393091 RC3H1Q5TC82 1133 aaKnown RBP17.28■□□□□ 0.36
USP44-202ENST00000393091 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
USP44-202ENST00000393091 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
USP44-202ENST00000393091 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
USP44-202ENST00000393091 CNTNAP4Q9C0A0 1308 aa17.28■□□□□ 0.36
USP44-202ENST00000393091 RGL2O15211 777 aa17.28■□□□□ 0.36
USP44-202ENST00000393091 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
USP44-202ENST00000393091 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
USP44-202ENST00000393091 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
USP44-202ENST00000393091 ASAP1Q9ULH1 1129 aa17.28■□□□□ 0.36
USP44-202ENST00000393091 ANKRD36CQ5JPF3 1778 aa17.27■□□□□ 0.36
USP44-202ENST00000393091 TRIM37O94972 964 aa17.27■□□□□ 0.36
USP44-202ENST00000393091 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.36
USP44-202ENST00000393091 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.35
USP44-202ENST00000393091 IBTKQ9P2D0 1353 aaPredicted RBP17.27■□□□□ 0.35
USP44-202ENST00000393091 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
USP44-202ENST00000393091 SLC4A9Q96Q91 983 aa17.26■□□□□ 0.35
USP44-202ENST00000393091 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
USP44-202ENST00000393091 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
USP44-202ENST00000393091 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
USP44-202ENST00000393091 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
USP44-202ENST00000393091 EP400Q96L91 3159 aa17.25■□□□□ 0.35
USP44-202ENST00000393091 PROM2Q8N271 834 aa17.25■□□□□ 0.35
USP44-202ENST00000393091 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
USP44-202ENST00000393091 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
USP44-202ENST00000393091 SIK1P57059 783 aa17.24■□□□□ 0.35
USP44-202ENST00000393091 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
USP44-202ENST00000393091 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
USP44-202ENST00000393091 TTC5Q8N0Z6 440 aa17.23■□□□□ 0.35
USP44-202ENST00000393091 KCNQ3O43525 872 aa17.22■□□□□ 0.35
USP44-202ENST00000393091 BAG6P46379 1132 aa17.22■□□□□ 0.35
USP44-202ENST00000393091 CYP19A1P11511 503 aaPredicted RBP17.22■□□□□ 0.35
USP44-202ENST00000393091 APBA3O96018 575 aa17.21■□□□□ 0.35
USP44-202ENST00000393091 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
USP44-202ENST00000393091 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
USP44-202ENST00000393091 TXNRD1Q16881 649 aa17.2■□□□□ 0.34
USP44-202ENST00000393091 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
USP44-202ENST00000393091 SLC39A6Q13433 755 aa17.2■□□□□ 0.34
USP44-202ENST00000393091 VAMP4O75379 141 aa17.2■□□□□ 0.34
USP44-202ENST00000393091 ITPK1Q13572 414 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms