RNA–Protein interactions for RNA: ENST00000392924.1

SYCP3-202, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-202ENST00000392924 GMCL1Q96IK5 515 aa9.44□□□□□ -0.9
SYCP3-202ENST00000392924 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
SYCP3-202ENST00000392924 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
SYCP3-202ENST00000392924 STAU1O95793 577 aaKnown RBP9.43□□□□□ -0.9
SYCP3-202ENST00000392924 PHKA2P46019 1235 aa9.43□□□□□ -0.9
SYCP3-202ENST00000392924 GTF2IP78347 998 aa9.43□□□□□ -0.9
SYCP3-202ENST00000392924 SERTAD1Q9UHV2 236 aa9.43□□□□□ -0.9
SYCP3-202ENST00000392924 BACH1O14867 736 aa9.42□□□□□ -0.9
SYCP3-202ENST00000392924 ATP9BO43861 1147 aa9.42□□□□□ -0.9
SYCP3-202ENST00000392924 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
SYCP3-202ENST00000392924 TBC1D9Q6ZT07 1266 aa9.42□□□□□ -0.9
SYCP3-202ENST00000392924 ZSCAN1Q8NBB4 408 aa9.42□□□□□ -0.9
SYCP3-202ENST00000392924 PCDHGA11Q9Y5H2 935 aa9.42□□□□□ -0.9
SYCP3-202ENST00000392924 F11P03951 625 aa9.41□□□□□ -0.9
SYCP3-202ENST00000392924 SCNN1DP51172 638 aa9.41□□□□□ -0.9
SYCP3-202ENST00000392924 SMTNP53814 917 aa9.41□□□□□ -0.9
SYCP3-202ENST00000392924 PPARGC1BQ86YN6 1023 aaKnown RBP9.41□□□□□ -0.9
SYCP3-202ENST00000392924 TRIM22Q8IYM9 498 aa9.41□□□□□ -0.9
SYCP3-202ENST00000392924 RHBDD1Q8TEB9 315 aa9.41□□□□□ -0.9
SYCP3-202ENST00000392924 CNTNAP3BQ96NU0 1288 aa9.41□□□□□ -0.9
SYCP3-202ENST00000392924 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
SYCP3-202ENST00000392924 CNTNAP3Q9BZ76 1288 aa9.41□□□□□ -0.9
SYCP3-202ENST00000392924 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
SYCP3-202ENST00000392924 CUEDC1Q9NWM3 386 aaPredicted RBP9.41□□□□□ -0.9
SYCP3-202ENST00000392924 STK17AQ9UEE5 414 aa9.41□□□□□ -0.9
SYCP3-202ENST00000392924 RBM19Q9Y4C8 960 aaKnown RBP9.41□□□□□ -0.9
SYCP3-202ENST00000392924 USP17L3A6NCW0 530 aa9.4□□□□□ -0.9
SYCP3-202ENST00000392924 USP17L4A6NCW7 530 aa9.4□□□□□ -0.9
SYCP3-202ENST00000392924 CSB-PGBD3P0DP91 1061 aa9.4□□□□□ -0.9
SYCP3-202ENST00000392924 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
SYCP3-202ENST00000392924 USP17L1Q7RTZ2 530 aa9.4□□□□□ -0.9
SYCP3-202ENST00000392924 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
SYCP3-202ENST00000392924 PGBD3Q8N328 593 aa9.4□□□□□ -0.9
SYCP3-202ENST00000392924 A0A1B0GTH6 734 aa9.39□□□□□ -0.91
SYCP3-202ENST00000392924 KRT76Q01546 638 aa9.39□□□□□ -0.91
SYCP3-202ENST00000392924 C4orf17Q53FE4 359 aa9.39□□□□□ -0.91
SYCP3-202ENST00000392924 TRERF1Q96PN7 1200 aa9.39□□□□□ -0.91
SYCP3-202ENST00000392924 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
SYCP3-202ENST00000392924 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
SYCP3-202ENST00000392924 UCN2Q96RP3 112 aa9.38□□□□□ -0.91
SYCP3-202ENST00000392924 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
SYCP3-202ENST00000392924 A6NJY4 79 aa9.37□□□□□ -0.91
SYCP3-202ENST00000392924 DBN1Q16643 649 aa9.37□□□□□ -0.91
SYCP3-202ENST00000392924 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
SYCP3-202ENST00000392924 SLC4A9Q96Q91 983 aa9.37□□□□□ -0.91
SYCP3-202ENST00000392924 NUCKS1Q9H1E3 243 aaKnown RBP9.37□□□□□ -0.91
SYCP3-202ENST00000392924 GPAMQ9HCL2 828 aa9.37□□□□□ -0.91
SYCP3-202ENST00000392924 DNAAF2Q9NVR5 837 aaKnown RBP9.37□□□□□ -0.91
SYCP3-202ENST00000392924 ZNF777Q9ULD5 760 aaPredicted RBP9.37□□□□□ -0.91
SYCP3-202ENST00000392924 TMEM229AB2RXF0 380 aa9.36□□□□□ -0.91
SYCP3-202ENST00000392924 CDK2AP1O14519 115 aa9.36□□□□□ -0.91
SYCP3-202ENST00000392924 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYCP3-202ENST00000392924 GTPBP3Q969Y2 492 aaKnown RBP9.36□□□□□ -0.91
SYCP3-202ENST00000392924 ZNF837Q96EG3 531 aaPredicted RBP9.36□□□□□ -0.91
SYCP3-202ENST00000392924 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
SYCP3-202ENST00000392924 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
SYCP3-202ENST00000392924 ZNF358Q9NW07 568 aa9.35□□□□□ -0.91
SYCP3-202ENST00000392924 CABP1Q9NZU7 370 aa9.35□□□□□ -0.91
SYCP3-202ENST00000392924 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
SYCP3-202ENST00000392924 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
SYCP3-202ENST00000392924 MSX1P28360 303 aa9.34□□□□□ -0.91
SYCP3-202ENST00000392924 EFHC2Q5JST6 749 aa9.34□□□□□ -0.91
SYCP3-202ENST00000392924 CCDC102BQ68D86 513 aa9.34□□□□□ -0.91
SYCP3-202ENST00000392924 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
SYCP3-202ENST00000392924 OGFOD1Q8N543 542 aa9.34□□□□□ -0.91
SYCP3-202ENST00000392924 TPCN2Q8NHX9 752 aa9.34□□□□□ -0.91
SYCP3-202ENST00000392924 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
SYCP3-202ENST00000392924 RASA1P20936 1047 aa9.33□□□□□ -0.92
SYCP3-202ENST00000392924 NBPF1Q3BBV0 1214 aa9.33□□□□□ -0.92
SYCP3-202ENST00000392924 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
SYCP3-202ENST00000392924 PHF24Q9UPV7 400 aa9.33□□□□□ -0.92
SYCP3-202ENST00000392924 GPR25O00155 361 aa9.32□□□□□ -0.92
SYCP3-202ENST00000392924 LBRQ14739 615 aaKnown RBP9.32□□□□□ -0.92
SYCP3-202ENST00000392924 MTFR1Q15390 333 aa9.32□□□□□ -0.92
SYCP3-202ENST00000392924 C1orf216Q8TAB5 229 aa9.32□□□□□ -0.92
SYCP3-202ENST00000392924 RUBCNLQ9H714 662 aa9.32□□□□□ -0.92
SYCP3-202ENST00000392924 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
SYCP3-202ENST00000392924 MAFBQ9Y5Q3 323 aaPredicted RBP9.32□□□□□ -0.92
SYCP3-202ENST00000392924 ZBTB7BO15156 539 aaPredicted RBP9.31□□□□□ -0.92
SYCP3-202ENST00000392924 TATP17735 454 aaPredicted RBP9.31□□□□□ -0.92
SYCP3-202ENST00000392924 LMOD1P29536 600 aaPredicted RBP9.31□□□□□ -0.92
SYCP3-202ENST00000392924 CLDN10P78369 228 aa9.31□□□□□ -0.92
SYCP3-202ENST00000392924 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
SYCP3-202ENST00000392924 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
SYCP3-202ENST00000392924 ARSJQ5FYB0 599 aaPredicted RBP9.3□□□□□ -0.92
SYCP3-202ENST00000392924 ZNF594Q96JF6 807 aaPredicted RBP9.3□□□□□ -0.92
SYCP3-202ENST00000392924 VRTNQ9H8Y1 702 aa9.3□□□□□ -0.92
SYCP3-202ENST00000392924 THBS1P07996 1170 aa9.29□□□□□ -0.92
SYCP3-202ENST00000392924 SRSF11Q05519 484 aaKnown RBP9.29□□□□□ -0.92
SYCP3-202ENST00000392924 GAS6Q14393 721 aa9.29□□□□□ -0.92
SYCP3-202ENST00000392924 TNS4Q8IZW8 715 aa9.29□□□□□ -0.92
SYCP3-202ENST00000392924 CFHR5Q9BXR6 569 aa9.29□□□□□ -0.92
SYCP3-202ENST00000392924 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
SYCP3-202ENST00000392924 SCHIP1Q9P0W5 487 aaPredicted RBP9.29□□□□□ -0.92
SYCP3-202ENST00000392924 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
SYCP3-202ENST00000392924 GJA3Q9Y6H8 435 aa9.29□□□□□ -0.92
SYCP3-202ENST00000392924 SLURP2P0DP57 97 aa9.28□□□□□ -0.92
SYCP3-202ENST00000392924 ZNF295-AS1Q8N0V1 137 aa9.28□□□□□ -0.92
SYCP3-202ENST00000392924 ZNF232Q9UNY5 417 aa9.28□□□□□ -0.92
SYCP3-202ENST00000392924 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms