RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 HAP1P54257 671 aaPredicted RBP22.89■■□□□ 1.26
TRAF3-203ENST00000392745 ZBTB7BO15156 539 aaPredicted RBP22.89■■□□□ 1.25
TRAF3-203ENST00000392745 LGR6Q9HBX8 967 aa22.88■■□□□ 1.25
TRAF3-203ENST00000392745 SLAIN2Q9P270 581 aa22.88■■□□□ 1.25
TRAF3-203ENST00000392745 TAF7Q15545 349 aaPredicted RBP22.88■■□□□ 1.25
TRAF3-203ENST00000392745 ERBB3P21860 1342 aa22.88■■□□□ 1.25
TRAF3-203ENST00000392745 API5Q9BZZ5 524 aaKnown RBP22.87■■□□□ 1.25
TRAF3-203ENST00000392745 CEMIPQ8WUJ3 1361 aa22.87■■□□□ 1.25
TRAF3-203ENST00000392745 HDAC1Q13547 482 aaPredicted RBP22.86■■□□□ 1.25
TRAF3-203ENST00000392745 PLEKHO1Q53GL0 409 aaPredicted RBP22.86■■□□□ 1.25
TRAF3-203ENST00000392745 CAMTA1Q9Y6Y1 1673 aa22.86■■□□□ 1.25
TRAF3-203ENST00000392745 COL18A1P39060 1754 aa22.85■■□□□ 1.25
TRAF3-203ENST00000392745 SLC4A2P04920 1241 aa22.85■■□□□ 1.25
TRAF3-203ENST00000392745 ZNF530Q6P9A1 599 aaPredicted RBP22.85■■□□□ 1.25
TRAF3-203ENST00000392745 CRYBG1Q9Y4K1 1723 aa22.84■■□□□ 1.25
TRAF3-203ENST00000392745 RGS12O14924 1447 aa22.83■■□□□ 1.25
TRAF3-203ENST00000392745 CHRNA2Q15822 529 aa22.83■■□□□ 1.25
TRAF3-203ENST00000392745 AMOTQ4VCS5 1084 aa22.83■■□□□ 1.25
TRAF3-203ENST00000392745 AKAP4Q5JQC9 854 aa22.83■■□□□ 1.25
TRAF3-203ENST00000392745 BABAM1Q9NWV8 329 aa22.83■■□□□ 1.25
TRAF3-203ENST00000392745 HSCBQ8IWL3 235 aa22.83■■□□□ 1.24
TRAF3-203ENST00000392745 LMO7Q8WWI1 1683 aa22.83■■□□□ 1.24
TRAF3-203ENST00000392745 CLCN1P35523 988 aa22.82■■□□□ 1.24
TRAF3-203ENST00000392745 MPRIPQ6WCQ1 1025 aa22.82■■□□□ 1.24
TRAF3-203ENST00000392745 MRE11P49959 708 aa22.81■■□□□ 1.24
TRAF3-203ENST00000392745 G2E3Q7L622 706 aa22.81■■□□□ 1.24
TRAF3-203ENST00000392745 NAP1L5Q96NT1 182 aaPredicted RBP22.81■■□□□ 1.24
TRAF3-203ENST00000392745 C1orf115Q9H7X2 142 aa22.81■■□□□ 1.24
TRAF3-203ENST00000392745 NLRP2Q9NX02 1062 aa22.8■■□□□ 1.24
TRAF3-203ENST00000392745 SOS2Q07890 1332 aaPredicted RBP22.8■■□□□ 1.24
TRAF3-203ENST00000392745 INTS3Q68E01 1043 aaKnown RBP22.8■■□□□ 1.24
TRAF3-203ENST00000392745 SMC5Q8IY18 1101 aa22.8■■□□□ 1.24
TRAF3-203ENST00000392745 PTPRCP08575 1304 aa22.79■■□□□ 1.24
TRAF3-203ENST00000392745 GRPEL1Q9HAV7 217 aa22.79■■□□□ 1.24
TRAF3-203ENST00000392745 DDX11L8A8MPP1 907 aa22.77■■□□□ 1.24
TRAF3-203ENST00000392745 DDIT3P35638 169 aa22.77■■□□□ 1.24
TRAF3-203ENST00000392745 NECTIN2Q92692 538 aa22.77■■□□□ 1.24
TRAF3-203ENST00000392745 CHMP4BQ9H444 224 aaKnown RBP22.77■■□□□ 1.24
TRAF3-203ENST00000392745 RNMTO43148 476 aaKnown RBP22.77■■□□□ 1.24
TRAF3-203ENST00000392745 C1orf141Q5JVX7 400 aa22.77■■□□□ 1.24
TRAF3-203ENST00000392745 KCNQ3O43525 872 aa22.76■■□□□ 1.23
TRAF3-203ENST00000392745 CPDO75976 1380 aa22.76■■□□□ 1.23
TRAF3-203ENST00000392745 FAM208AQ9UK61 1670 aaKnown RBP22.76■■□□□ 1.23
TRAF3-203ENST00000392745 TEFQ10587 303 aa22.75■■□□□ 1.23
TRAF3-203ENST00000392745 CCDC30Q5VVM6 783 aa22.75■■□□□ 1.23
TRAF3-203ENST00000392745 SIRT2Q8IXJ6 389 aa22.75■■□□□ 1.23
TRAF3-203ENST00000392745 CSB-PGBD3P0DP91 1061 aa22.74■■□□□ 1.23
TRAF3-203ENST00000392745 EIF4A1P60842 406 aaKnown RBP22.74■■□□□ 1.23
TRAF3-203ENST00000392745 STK31Q9BXU1 1019 aa22.74■■□□□ 1.23
TRAF3-203ENST00000392745 KDM3BQ7LBC6 1761 aa22.74■■□□□ 1.23
TRAF3-203ENST00000392745 RBM25P49756 843 aaKnown RBP22.74■■□□□ 1.23
TRAF3-203ENST00000392745 CACNA1FO60840 1977 aa22.74■■□□□ 1.23
TRAF3-203ENST00000392745 F6X3S4 739 aa22.73■■□□□ 1.23
TRAF3-203ENST00000392745 RAPGEF4Q8WZA2 1011 aa22.73■■□□□ 1.23
TRAF3-203ENST00000392745 TNPO1Q92973 898 aaKnown RBP22.73■■□□□ 1.23
TRAF3-203ENST00000392745 BTBD11A6QL63 1104 aa22.73■■□□□ 1.23
TRAF3-203ENST00000392745 LNPKQ9C0E8 428 aa22.73■■□□□ 1.23
TRAF3-203ENST00000392745 SOS1Q07889 1333 aaPredicted RBP22.73■■□□□ 1.23
TRAF3-203ENST00000392745 ERBB4Q15303 1308 aa22.71■■□□□ 1.23
TRAF3-203ENST00000392745 NUCB1Q02818 461 aa22.71■■□□□ 1.23
TRAF3-203ENST00000392745 SNX21Q969T3 373 aa22.71■■□□□ 1.23
TRAF3-203ENST00000392745 MEGF6O75095 1541 aa22.71■■□□□ 1.23
TRAF3-203ENST00000392745 ABCC6O95255 1503 aa22.71■■□□□ 1.23
TRAF3-203ENST00000392745 FLIIQ13045 1269 aa22.7■■□□□ 1.22
TRAF3-203ENST00000392745 GAS2L3Q86XJ1 694 aa22.7■■□□□ 1.22
TRAF3-203ENST00000392745 TATP17735 454 aaPredicted RBP22.7■■□□□ 1.22
TRAF3-203ENST00000392745 HDGFL1Q5TGJ6 251 aa22.69■■□□□ 1.22
TRAF3-203ENST00000392745 SLC4A10Q6U841 1118 aa22.69■■□□□ 1.22
TRAF3-203ENST00000392745 OVOS2A0A0G2JMS6 1433 aa22.68■■□□□ 1.22
TRAF3-203ENST00000392745 ESPNB1AK53 854 aa22.68■■□□□ 1.22
TRAF3-203ENST00000392745 PRDM11Q9NQV5 511 aa22.68■■□□□ 1.22
TRAF3-203ENST00000392745 HSP90AB1P08238 724 aaKnown RBP22.68■■□□□ 1.22
TRAF3-203ENST00000392745 MEIS3Q99687 375 aa22.68■■□□□ 1.22
TRAF3-203ENST00000392745 ADAMTS7Q9UKP4 1686 aa22.68■■□□□ 1.22
TRAF3-203ENST00000392745 SIPA1L3O60292 1781 aaPredicted RBP22.67■■□□□ 1.22
TRAF3-203ENST00000392745 EIF2S2P20042 333 aaKnown RBP22.67■■□□□ 1.22
TRAF3-203ENST00000392745 FKBP5Q13451 457 aaPredicted RBP22.67■■□□□ 1.22
TRAF3-203ENST00000392745 CHD1LQ86WJ1 897 aa22.67■■□□□ 1.22
TRAF3-203ENST00000392745 KIF2CQ99661 725 aa22.67■■□□□ 1.22
TRAF3-203ENST00000392745 FOXD4L1Q9NU39 408 aa22.67■■□□□ 1.22
TRAF3-203ENST00000392745 CD2BP2O95400 341 aaKnown RBP22.66■■□□□ 1.22
TRAF3-203ENST00000392745 ISY1Q9ULR0 285 aaKnown RBP22.66■■□□□ 1.22
TRAF3-203ENST00000392745 NHSL1Q5SYE7 1610 aa22.66■■□□□ 1.22
TRAF3-203ENST00000392745 PHKG2P15735 406 aa22.66■■□□□ 1.22
TRAF3-203ENST00000392745 RAB3GAP1Q15042 981 aa22.66■■□□□ 1.22
TRAF3-203ENST00000392745 PHAXQ9H814 394 aaKnown RBP22.66■■□□□ 1.22
TRAF3-203ENST00000392745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.66■■□□□ 1.22
TRAF3-203ENST00000392745 SPG7Q9UQ90 795 aa22.66■■□□□ 1.22
TRAF3-203ENST00000392745 GCC1Q96CN9 775 aa22.65■■□□□ 1.22
TRAF3-203ENST00000392745 HOXB7P09629 217 aa22.64■■□□□ 1.21
TRAF3-203ENST00000392745 CCT4P50991 539 aaKnown RBP22.64■■□□□ 1.21
TRAF3-203ENST00000392745 CIZ1Q9ULV3 898 aaPredicted RBP22.64■■□□□ 1.21
TRAF3-203ENST00000392745 SCN11AQ9UI33 1791 aa22.64■■□□□ 1.21
TRAF3-203ENST00000392745 ABCA3Q99758 1704 aa22.64■■□□□ 1.21
TRAF3-203ENST00000392745 KDM6AO15550 1401 aaPredicted RBP22.64■■□□□ 1.21
TRAF3-203ENST00000392745 GBP4Q96PP9 640 aa22.64■■□□□ 1.21
TRAF3-203ENST00000392745 ATP10DQ9P241 1426 aa22.63■■□□□ 1.21
TRAF3-203ENST00000392745 HSP90AA1P07900 732 aaKnown RBP22.63■■□□□ 1.21
TRAF3-203ENST00000392745 CYP27B1O15528 508 aa22.63■■□□□ 1.21
TRAF3-203ENST00000392745 ANKRD45Q5TZF3 282 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms