RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RGS12O14924 1447 aa27.06■■□□□ 1.92
SPHK1-202ENST00000392496 COL16A1Q07092 1604 aaPredicted RBP27.05■■□□□ 1.92
SPHK1-202ENST00000392496 HDAC1Q13547 482 aaPredicted RBP27.05■■□□□ 1.92
SPHK1-202ENST00000392496 JCADQ9P266 1359 aa27.05■■□□□ 1.92
SPHK1-202ENST00000392496 PKD1L3Q7Z443 1732 aa27.05■■□□□ 1.92
SPHK1-202ENST00000392496 STK31Q9BXU1 1019 aa27.04■■□□□ 1.92
SPHK1-202ENST00000392496 WDR17Q8IZU2 1322 aa27.04■■□□□ 1.92
SPHK1-202ENST00000392496 INTS3Q68E01 1043 aaKnown RBP27.04■■□□□ 1.92
SPHK1-202ENST00000392496 SKAP1Q86WV1 359 aa27.04■■□□□ 1.92
SPHK1-202ENST00000392496 SIPA1L3O60292 1781 aaPredicted RBP27.04■■□□□ 1.92
SPHK1-202ENST00000392496 HOXB7P09629 217 aa27.02■■□□□ 1.92
SPHK1-202ENST00000392496 EIF4A1P60842 406 aaKnown RBP27.02■■□□□ 1.92
SPHK1-202ENST00000392496 COL5A2P05997 1499 aaPredicted RBP27.02■■□□□ 1.92
SPHK1-202ENST00000392496 BTBD11A6QL63 1104 aa27.02■■□□□ 1.92
SPHK1-202ENST00000392496 CHMP4AQ9BY43 222 aa27.02■■□□□ 1.92
SPHK1-202ENST00000392496 SCN11AQ9UI33 1791 aa27.01■■□□□ 1.91
SPHK1-202ENST00000392496 PHKG2P15735 406 aa26.99■■□□□ 1.91
SPHK1-202ENST00000392496 IFNL2Q8IZJ0 200 aa26.99■■□□□ 1.91
SPHK1-202ENST00000392496 PARP4Q9UKK3 1724 aaKnown RBP26.99■■□□□ 1.91
SPHK1-202ENST00000392496 G2E3Q7L622 706 aa26.97■■□□□ 1.91
SPHK1-202ENST00000392496 PDE4AP27815 886 aa26.97■■□□□ 1.91
SPHK1-202ENST00000392496 TOM1L2Q6ZVM7 507 aa26.96■■□□□ 1.91
SPHK1-202ENST00000392496 SPATA31A6Q5VVP1 1343 aa26.96■■□□□ 1.91
SPHK1-202ENST00000392496 COL22A1Q8NFW1 1626 aaPredicted RBP26.96■■□□□ 1.91
SPHK1-202ENST00000392496 KDM6AO15550 1401 aaPredicted RBP26.95■■□□□ 1.91
SPHK1-202ENST00000392496 RGS3P49796 1198 aa26.95■■□□□ 1.9
SPHK1-202ENST00000392496 HDGFL1Q5TGJ6 251 aa26.95■■□□□ 1.9
SPHK1-202ENST00000392496 KCNQ3O43525 872 aa26.94■■□□□ 1.9
SPHK1-202ENST00000392496 CARD10Q9BWT7 1032 aa26.94■■□□□ 1.9
SPHK1-202ENST00000392496 BACH2Q9BYV9 841 aa26.94■■□□□ 1.9
SPHK1-202ENST00000392496 HSP90AB1P08238 724 aaKnown RBP26.94■■□□□ 1.9
SPHK1-202ENST00000392496 PDZRN3Q9UPQ7 1066 aa26.94■■□□□ 1.9
SPHK1-202ENST00000392496 FLIIQ13045 1269 aa26.93■■□□□ 1.9
SPHK1-202ENST00000392496 SMC5Q8IY18 1101 aa26.93■■□□□ 1.9
SPHK1-202ENST00000392496 HEG1Q9ULI3 1381 aa26.93■■□□□ 1.9
SPHK1-202ENST00000392496 MRC1P22897 1456 aa26.92■■□□□ 1.9
SPHK1-202ENST00000392496 DCAF5Q96JK2 942 aa26.92■■□□□ 1.9
SPHK1-202ENST00000392496 SLC52A2Q9HAB3 445 aa26.92■■□□□ 1.9
SPHK1-202ENST00000392496 CYP27B1O15528 508 aa26.92■■□□□ 1.9
SPHK1-202ENST00000392496 CCT4P50991 539 aaKnown RBP26.91■■□□□ 1.9
SPHK1-202ENST00000392496 NECTIN2Q92692 538 aa26.91■■□□□ 1.9
SPHK1-202ENST00000392496 EVA1CP58658 441 aa26.89■■□□□ 1.9
SPHK1-202ENST00000392496 COL14A1Q05707 1796 aaKnown RBP26.89■■□□□ 1.9
SPHK1-202ENST00000392496 NUTM2BA6NNL0 878 aaPredicted RBP26.89■■□□□ 1.89
SPHK1-202ENST00000392496 NUTM2EB1AL46 878 aaPredicted RBP26.89■■□□□ 1.89
SPHK1-202ENST00000392496 NUTM2AQ8IVF1 878 aaPredicted RBP26.89■■□□□ 1.89
SPHK1-202ENST00000392496 N4BP2Q86UW6 1770 aaPredicted RBP26.88■■□□□ 1.89
SPHK1-202ENST00000392496 FKBP5Q13451 457 aaPredicted RBP26.88■■□□□ 1.89
SPHK1-202ENST00000392496 PXDNLA1KZ92 1463 aa26.87■■□□□ 1.89
SPHK1-202ENST00000392496 ZCRB1Q8TBF4 217 aaKnown RBP26.87■■□□□ 1.89
SPHK1-202ENST00000392496 C1orf115Q9H7X2 142 aa26.87■■□□□ 1.89
SPHK1-202ENST00000392496 PCDH11XQ9BZA7 1347 aa26.87■■□□□ 1.89
SPHK1-202ENST00000392496 PCDH11YQ9BZA8 1340 aa26.87■■□□□ 1.89
SPHK1-202ENST00000392496 GIGYF1O75420 1035 aaPredicted RBP26.86■■□□□ 1.89
SPHK1-202ENST00000392496 IL2RBP14784 551 aa26.86■■□□□ 1.89
SPHK1-202ENST00000392496 EIF2S2P20042 333 aaKnown RBP26.86■■□□□ 1.89
SPHK1-202ENST00000392496 LARP1Q6PKG0 1096 aaKnown RBP26.86■■□□□ 1.89
SPHK1-202ENST00000392496 STRN4Q9NRL3 753 aa26.86■■□□□ 1.89
SPHK1-202ENST00000392496 F6X3S4 739 aa26.86■■□□□ 1.89
SPHK1-202ENST00000392496 FAM161AQ3B820 660 aa26.86■■□□□ 1.89
SPHK1-202ENST00000392496 ZNF790Q6PG37 636 aa26.84■■□□□ 1.89
SPHK1-202ENST00000392496 GCC1Q96CN9 775 aa26.84■■□□□ 1.89
SPHK1-202ENST00000392496 MEX3CQ5U5Q3 659 aaKnown RBP26.84■■□□□ 1.89
SPHK1-202ENST00000392496 SLC4A10Q6U841 1118 aa26.84■■□□□ 1.89
SPHK1-202ENST00000392496 NFATC2IPQ8NCF5 419 aa26.84■■□□□ 1.89
SPHK1-202ENST00000392496 SIRT2Q8IXJ6 389 aa26.83■■□□□ 1.89
SPHK1-202ENST00000392496 CHPF2Q9P2E5 772 aa26.82■■□□□ 1.88
SPHK1-202ENST00000392496 RPAP2Q8IXW5 612 aaPredicted RBP26.81■■□□□ 1.88
SPHK1-202ENST00000392496 BTG4Q9NY30 223 aa26.81■■□□□ 1.88
SPHK1-202ENST00000392496 DBF4Q9UBU7 674 aaPredicted RBP26.81■■□□□ 1.88
SPHK1-202ENST00000392496 ADAMTS2O95450 1211 aa26.81■■□□□ 1.88
SPHK1-202ENST00000392496 ILDR1Q86SU0 546 aaPredicted RBP26.81■■□□□ 1.88
SPHK1-202ENST00000392496 MEIS3Q99687 375 aa26.81■■□□□ 1.88
SPHK1-202ENST00000392496 PHAXQ9H814 394 aaKnown RBP26.81■■□□□ 1.88
SPHK1-202ENST00000392496 ATP10DQ9P241 1426 aa26.81■■□□□ 1.88
SPHK1-202ENST00000392496 SHANK3Q9BYB0 1731 aa26.81■■□□□ 1.88
SPHK1-202ENST00000392496 NUCB1Q02818 461 aa26.8■■□□□ 1.88
SPHK1-202ENST00000392496 NKX1-1Q15270 411 aaPredicted RBP26.8■■□□□ 1.88
SPHK1-202ENST00000392496 C8orf34Q49A92 452 aa26.8■■□□□ 1.88
SPHK1-202ENST00000392496 ANKRD44Q8N8A2 993 aa26.8■■□□□ 1.88
SPHK1-202ENST00000392496 CABP4P57796 275 aa26.79■■□□□ 1.88
SPHK1-202ENST00000392496 SLC39A6Q13433 755 aa26.78■■□□□ 1.88
SPHK1-202ENST00000392496 CEP85Q6P2H3 762 aa26.76■■□□□ 1.88
SPHK1-202ENST00000392496 ERVV-2B6SEH9 535 aa26.76■■□□□ 1.87
SPHK1-202ENST00000392496 C5P01031 1676 aa26.75■■□□□ 1.87
SPHK1-202ENST00000392496 GNAI3P08754 354 aa26.75■■□□□ 1.87
SPHK1-202ENST00000392496 TTC5Q8N0Z6 440 aa26.75■■□□□ 1.87
SPHK1-202ENST00000392496 CHD1LQ86WJ1 897 aa26.74■■□□□ 1.87
SPHK1-202ENST00000392496 HYPKQ9NX55 129 aa26.74■■□□□ 1.87
SPHK1-202ENST00000392496 PRAMEF22A3QJZ6 481 aa26.74■■□□□ 1.87
SPHK1-202ENST00000392496 NGLY1Q96IV0 654 aa26.74■■□□□ 1.87
SPHK1-202ENST00000392496 DCTPP1Q9H773 170 aa26.74■■□□□ 1.87
SPHK1-202ENST00000392496 ZNF496Q96IT1 587 aaPredicted RBP26.73■■□□□ 1.87
SPHK1-202ENST00000392496 DDX21Q9NR30 783 aaKnown RBP eCLIP26.73■■□□□ 1.87
SPHK1-202ENST00000392496 GNAI2P04899 355 aa26.72■■□□□ 1.87
SPHK1-202ENST00000392496 C8orf37Q96NL8 207 aa26.72■■□□□ 1.87
SPHK1-202ENST00000392496 FMNL2Q96PY5 1086 aa26.72■■□□□ 1.87
SPHK1-202ENST00000392496 PLCH1Q4KWH8 1693 aa26.72■■□□□ 1.87
SPHK1-202ENST00000392496 DISP2A7MBM2 1401 aa26.72■■□□□ 1.87
SPHK1-202ENST00000392496 DNAAF4Q8WXU2 420 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms