RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 LGR6Q9HBX8 967 aa18.73■□□□□ 0.59
CCDC57-204ENST00000392345 MRC1P22897 1456 aa18.72■□□□□ 0.59
CCDC57-204ENST00000392345 MSH5O43196 834 aa18.72■□□□□ 0.59
CCDC57-204ENST00000392345 ATP6V1AP38606 617 aa18.72■□□□□ 0.59
CCDC57-204ENST00000392345 MSL1Q68DK7 614 aa18.72■□□□□ 0.59
CCDC57-204ENST00000392345 NFATC2IPQ8NCF5 419 aa18.72■□□□□ 0.59
CCDC57-204ENST00000392345 AK7Q96M32 723 aa18.72■□□□□ 0.59
CCDC57-204ENST00000392345 SCN11AQ9UI33 1791 aa18.71■□□□□ 0.59
CCDC57-204ENST00000392345 PHF14O94880 888 aa18.71■□□□□ 0.59
CCDC57-204ENST00000392345 SLC16A10Q8TF71 515 aa18.71■□□□□ 0.59
CCDC57-204ENST00000392345 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
CCDC57-204ENST00000392345 FHDC1Q9C0D6 1143 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-204ENST00000392345 ADAMTS7Q9UKP4 1686 aa18.7■□□□□ 0.58
CCDC57-204ENST00000392345 RNMTO43148 476 aaKnown RBP18.7■□□□□ 0.58
CCDC57-204ENST00000392345 COL24A1Q17RW2 1714 aa18.7■□□□□ 0.58
CCDC57-204ENST00000392345 ARXQ96QS3 562 aa18.7■□□□□ 0.58
CCDC57-204ENST00000392345 RBM42Q9BTD8 480 aaKnown RBP18.7■□□□□ 0.58
CCDC57-204ENST00000392345 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
CCDC57-204ENST00000392345 UTRNP46939 3433 aa18.69■□□□□ 0.58
CCDC57-204ENST00000392345 SLC52A2Q9HAB3 445 aa18.69■□□□□ 0.58
CCDC57-204ENST00000392345 UBR3Q6ZT12 1888 aa18.69■□□□□ 0.58
CCDC57-204ENST00000392345 GOLGB1Q14789 3259 aaKnown RBP18.68■□□□□ 0.58
CCDC57-204ENST00000392345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
CCDC57-204ENST00000392345 GNPATO15228 680 aa18.68■□□□□ 0.58
CCDC57-204ENST00000392345 PTCD1O75127 700 aaKnown RBP18.68■□□□□ 0.58
CCDC57-204ENST00000392345 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
CCDC57-204ENST00000392345 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
CCDC57-204ENST00000392345 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
CCDC57-204ENST00000392345 SYT17Q9BSW7 474 aa18.67■□□□□ 0.58
CCDC57-204ENST00000392345 MAP3K5Q99683 1374 aa18.67■□□□□ 0.58
CCDC57-204ENST00000392345 ZNF831Q5JPB2 1677 aa18.66■□□□□ 0.58
CCDC57-204ENST00000392345 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
CCDC57-204ENST00000392345 U2AF1L5P0DN76 240 aaPredicted RBP18.66■□□□□ 0.58
CCDC57-204ENST00000392345 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC57-204ENST00000392345 POLD1P28340 1107 aa18.65■□□□□ 0.58
CCDC57-204ENST00000392345 SLC39A6Q13433 755 aa18.65■□□□□ 0.58
CCDC57-204ENST00000392345 TJP1Q07157 1748 aa18.65■□□□□ 0.58
CCDC57-204ENST00000392345 KCPQ6ZWJ8 1503 aa18.64■□□□□ 0.58
CCDC57-204ENST00000392345 SSFA2P28290 1259 aa18.64■□□□□ 0.57
CCDC57-204ENST00000392345 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
CCDC57-204ENST00000392345 FLAD1Q8NFF5 587 aa18.64■□□□□ 0.57
CCDC57-204ENST00000392345 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
CCDC57-204ENST00000392345 NUDCQ9Y266 331 aa18.64■□□□□ 0.57
CCDC57-204ENST00000392345 IL17REQ8NFR9 667 aa18.63■□□□□ 0.57
CCDC57-204ENST00000392345 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
CCDC57-204ENST00000392345 HMGB2P26583 209 aaKnown RBP18.62■□□□□ 0.57
CCDC57-204ENST00000392345 CNTNAP4Q9C0A0 1308 aa18.62■□□□□ 0.57
CCDC57-204ENST00000392345 CICQ96RK0 1608 aaPredicted RBP18.62■□□□□ 0.57
CCDC57-204ENST00000392345 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
CCDC57-204ENST00000392345 NLGN2Q8NFZ4 835 aa18.61■□□□□ 0.57
CCDC57-204ENST00000392345 RC3H1Q5TC82 1133 aaKnown RBP18.6■□□□□ 0.57
CCDC57-204ENST00000392345 DNAJC10Q8IXB1 793 aa18.6■□□□□ 0.57
CCDC57-204ENST00000392345 CEMIPQ8WUJ3 1361 aa18.59■□□□□ 0.57
CCDC57-204ENST00000392345 CRKLP46109 303 aaKnown RBP18.59■□□□□ 0.57
CCDC57-204ENST00000392345 RTCBQ9Y3I0 505 aaKnown RBP18.59■□□□□ 0.57
CCDC57-204ENST00000392345 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
CCDC57-204ENST00000392345 FCHSD2O94868 740 aa18.58■□□□□ 0.56
CCDC57-204ENST00000392345 INTS5Q6P9B9 1019 aaKnown RBP18.57■□□□□ 0.56
CCDC57-204ENST00000392345 ARHGEF1Q92888 912 aaKnown RBP18.57■□□□□ 0.56
CCDC57-204ENST00000392345 SIPA1L3O60292 1781 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-204ENST00000392345 UBR2Q8IWV8 1755 aa18.57■□□□□ 0.56
CCDC57-204ENST00000392345 RPS6KA4O75676 772 aa18.56■□□□□ 0.56
CCDC57-204ENST00000392345 TEFQ10587 303 aa18.56■□□□□ 0.56
CCDC57-204ENST00000392345 RALBP1Q15311 655 aa18.56■□□□□ 0.56
CCDC57-204ENST00000392345 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
CCDC57-204ENST00000392345 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
CCDC57-204ENST00000392345 TRAPPC3LQ5T215 181 aa18.55■□□□□ 0.56
CCDC57-204ENST00000392345 MCM10Q7L590 875 aa18.55■□□□□ 0.56
CCDC57-204ENST00000392345 KCNQ3O43525 872 aa18.54■□□□□ 0.56
CCDC57-204ENST00000392345 CYP19A1P11511 503 aaPredicted RBP18.54■□□□□ 0.56
CCDC57-204ENST00000392345 ADRA2BP18089 450 aa18.54■□□□□ 0.56
CCDC57-204ENST00000392345 ZNF496Q96IT1 587 aaPredicted RBP18.54■□□□□ 0.56
CCDC57-204ENST00000392345 PLEKHF1Q96S99 279 aa18.54■□□□□ 0.56
CCDC57-204ENST00000392345 CCDC87Q9NVE4 849 aa18.53■□□□□ 0.56
CCDC57-204ENST00000392345 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
CCDC57-204ENST00000392345 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
CCDC57-204ENST00000392345 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.56
CCDC57-204ENST00000392345 MMP10P09238 476 aa18.52■□□□□ 0.56
CCDC57-204ENST00000392345 GYS1P13807 737 aa18.52■□□□□ 0.56
CCDC57-204ENST00000392345 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
CCDC57-204ENST00000392345 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
CCDC57-204ENST00000392345 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.56
CCDC57-204ENST00000392345 RFC4P35249 363 aa18.51■□□□□ 0.55
CCDC57-204ENST00000392345 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
CCDC57-204ENST00000392345 HEG1Q9ULI3 1381 aa18.51■□□□□ 0.55
CCDC57-204ENST00000392345 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
CCDC57-204ENST00000392345 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
CCDC57-204ENST00000392345 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
CCDC57-204ENST00000392345 BTBD11A6QL63 1104 aa18.49■□□□□ 0.55
CCDC57-204ENST00000392345 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
CCDC57-204ENST00000392345 RTF1Q92541 710 aaKnown RBP18.49■□□□□ 0.55
CCDC57-204ENST00000392345 FKBP8Q14318 412 aa18.48■□□□□ 0.55
CCDC57-204ENST00000392345 CD2APQ9Y5K6 639 aa18.48■□□□□ 0.55
CCDC57-204ENST00000392345 COL15A1P39059 1388 aa18.47■□□□□ 0.55
CCDC57-204ENST00000392345 YBX3P16989 372 aaKnown RBP eCLIP18.47■□□□□ 0.55
CCDC57-204ENST00000392345 YY1P25490 414 aa18.47■□□□□ 0.55
CCDC57-204ENST00000392345 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
CCDC57-204ENST00000392345 GPR162Q16538 588 aa18.47■□□□□ 0.55
CCDC57-204ENST00000392345 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
CCDC57-204ENST00000392345 PRKRIP1Q9H875 184 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms