RNA–Protein interactions for RNA: ENST00000392245.5

SUMO1-202, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUMO1, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-202ENST00000392245 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
SUMO1-202ENST00000392245 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
SUMO1-202ENST00000392245 A0A0G2JLW4 131 aa16.82■□□□□ 0.28
SUMO1-202ENST00000392245 HMGB2P26583 209 aaKnown RBP16.82■□□□□ 0.28
SUMO1-202ENST00000392245 SSFA2P28290 1259 aa16.82■□□□□ 0.28
SUMO1-202ENST00000392245 TNS4Q8IZW8 715 aa16.82■□□□□ 0.28
SUMO1-202ENST00000392245 RBM46Q8TBY0 533 aaKnown RBP16.82■□□□□ 0.28
SUMO1-202ENST00000392245 SMARCC1Q92922 1105 aaPredicted RBP16.82■□□□□ 0.28
SUMO1-202ENST00000392245 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
SUMO1-202ENST00000392245 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
SUMO1-202ENST00000392245 MMP10P09238 476 aa16.81■□□□□ 0.28
SUMO1-202ENST00000392245 PRELPP51888 382 aa16.81■□□□□ 0.28
SUMO1-202ENST00000392245 PIGBQ92521 554 aa16.81■□□□□ 0.28
SUMO1-202ENST00000392245 NEUROD1Q13562 356 aa16.8■□□□□ 0.28
SUMO1-202ENST00000392245 ARFGEF1Q9Y6D6 1849 aa16.8■□□□□ 0.28
SUMO1-202ENST00000392245 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
SUMO1-202ENST00000392245 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
SUMO1-202ENST00000392245 ITPK1Q13572 414 aa16.79■□□□□ 0.28
SUMO1-202ENST00000392245 RTL1A6NKG5 1358 aa16.78■□□□□ 0.28
SUMO1-202ENST00000392245 SBF1O95248 1867 aa16.78■□□□□ 0.28
SUMO1-202ENST00000392245 LOC102724428A0A0B4J2F2 783 aa16.78■□□□□ 0.28
SUMO1-202ENST00000392245 GNPATO15228 680 aa16.78■□□□□ 0.28
SUMO1-202ENST00000392245 SIK1P57059 783 aa16.78■□□□□ 0.28
SUMO1-202ENST00000392245 TGFB2P61812 414 aa16.78■□□□□ 0.28
SUMO1-202ENST00000392245 DPEP1P16444 411 aa16.77■□□□□ 0.28
SUMO1-202ENST00000392245 HSP90AB2PQ58FF8 381 aa16.77■□□□□ 0.28
SUMO1-202ENST00000392245 C9orf131Q5VYM1 1079 aa16.77■□□□□ 0.28
SUMO1-202ENST00000392245 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.28
SUMO1-202ENST00000392245 CARD11Q9BXL7 1154 aa16.77■□□□□ 0.28
SUMO1-202ENST00000392245 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
SUMO1-202ENST00000392245 FCHSD2O94868 740 aa16.76■□□□□ 0.27
SUMO1-202ENST00000392245 PCNTO95613 3336 aa16.76■□□□□ 0.27
SUMO1-202ENST00000392245 FSTL1Q12841 308 aa16.75■□□□□ 0.27
SUMO1-202ENST00000392245 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
SUMO1-202ENST00000392245 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
SUMO1-202ENST00000392245 C10orf71Q711Q0 1435 aa16.75■□□□□ 0.27
SUMO1-202ENST00000392245 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
SUMO1-202ENST00000392245 C4AP0C0L4 1744 aa16.74■□□□□ 0.27
SUMO1-202ENST00000392245 ATP6V1AP38606 617 aa16.74■□□□□ 0.27
SUMO1-202ENST00000392245 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
SUMO1-202ENST00000392245 RRAGCQ9HB90 399 aa16.74■□□□□ 0.27
SUMO1-202ENST00000392245 KCNA3P22001 575 aa16.73■□□□□ 0.27
SUMO1-202ENST00000392245 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
SUMO1-202ENST00000392245 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
SUMO1-202ENST00000392245 INSRP06213 1382 aa16.73■□□□□ 0.27
SUMO1-202ENST00000392245 TNRC6CQ9HCJ0 1690 aaKnown RBP16.72■□□□□ 0.27
SUMO1-202ENST00000392245 FYB1O15117 783 aa16.72■□□□□ 0.27
SUMO1-202ENST00000392245 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
SUMO1-202ENST00000392245 TMF1P82094 1093 aa16.71■□□□□ 0.27
SUMO1-202ENST00000392245 PLEKHG2Q9H7P9 1386 aa16.7■□□□□ 0.26
SUMO1-202ENST00000392245 TRAPPC3LQ5T215 181 aa16.7■□□□□ 0.26
SUMO1-202ENST00000392245 NLGN1Q8N2Q7 840 aa16.7■□□□□ 0.26
SUMO1-202ENST00000392245 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
SUMO1-202ENST00000392245 TMOD3Q9NYL9 352 aa16.7■□□□□ 0.26
SUMO1-202ENST00000392245 KIF20BQ96Q89 1820 aa16.7■□□□□ 0.26
SUMO1-202ENST00000392245 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
SUMO1-202ENST00000392245 CCDC88AQ3V6T2 1871 aa16.69■□□□□ 0.26
SUMO1-202ENST00000392245 HSPA1AP0DMV8 641 aaKnown RBP16.69■□□□□ 0.26
SUMO1-202ENST00000392245 HSPA1BP0DMV9 641 aaKnown RBP16.69■□□□□ 0.26
SUMO1-202ENST00000392245 ARHGEF1Q92888 912 aaKnown RBP16.69■□□□□ 0.26
SUMO1-202ENST00000392245 TESK2Q96S53 571 aa16.69■□□□□ 0.26
SUMO1-202ENST00000392245 ATG3Q9NT62 314 aa16.69■□□□□ 0.26
SUMO1-202ENST00000392245 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
SUMO1-202ENST00000392245 COL5A3P25940 1745 aaPredicted RBP16.68■□□□□ 0.26
SUMO1-202ENST00000392245 FLT4P35916 1363 aa16.68■□□□□ 0.26
SUMO1-202ENST00000392245 GYS1P13807 737 aa16.68■□□□□ 0.26
SUMO1-202ENST00000392245 SLC4A9Q96Q91 983 aa16.68■□□□□ 0.26
SUMO1-202ENST00000392245 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
SUMO1-202ENST00000392245 DCAF5Q96JK2 942 aa16.67■□□□□ 0.26
SUMO1-202ENST00000392245 SMC1BQ8NDV3 1235 aa16.66■□□□□ 0.26
SUMO1-202ENST00000392245 PIM2Q9P1W9 311 aa16.66■□□□□ 0.26
SUMO1-202ENST00000392245 SPG7Q9UQ90 795 aa16.66■□□□□ 0.26
SUMO1-202ENST00000392245 PARP3Q9Y6F1 533 aa16.66■□□□□ 0.26
SUMO1-202ENST00000392245 NCAPD2Q15021 1401 aa16.65■□□□□ 0.26
SUMO1-202ENST00000392245 EMILIN1Q9Y6C2 1016 aa16.65■□□□□ 0.26
SUMO1-202ENST00000392245 KDRP35968 1356 aa16.64■□□□□ 0.26
SUMO1-202ENST00000392245 ST20-MTHFSA0A0A6YYL1 179 aa16.64■□□□□ 0.25
SUMO1-202ENST00000392245 DALRD3Q5D0E6 543 aaKnown RBP16.64■□□□□ 0.25
SUMO1-202ENST00000392245 ZNF831Q5JPB2 1677 aa16.64■□□□□ 0.25
SUMO1-202ENST00000392245 PHKG2P15735 406 aa16.63■□□□□ 0.25
SUMO1-202ENST00000392245 CHRNA5P30532 468 aa16.63■□□□□ 0.25
SUMO1-202ENST00000392245 RFC4P35249 363 aa16.63■□□□□ 0.25
SUMO1-202ENST00000392245 KIF24Q5T7B8 1368 aa16.63■□□□□ 0.25
SUMO1-202ENST00000392245 RPS6KA4O75676 772 aa16.62■□□□□ 0.25
SUMO1-202ENST00000392245 RC3H1Q5TC82 1133 aaKnown RBP16.62■□□□□ 0.25
SUMO1-202ENST00000392245 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
SUMO1-202ENST00000392245 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
SUMO1-202ENST00000392245 SPDYE2Q495Y8 402 aa16.61■□□□□ 0.25
SUMO1-202ENST00000392245 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
SUMO1-202ENST00000392245 EYA1Q99502 592 aa16.61■□□□□ 0.25
SUMO1-202ENST00000392245 SRP68Q9UHB9 627 aaKnown RBP16.61■□□□□ 0.25
SUMO1-202ENST00000392245 RASSF7Q02833 373 aa16.6■□□□□ 0.25
SUMO1-202ENST00000392245 DDR1Q08345 913 aa16.6■□□□□ 0.25
SUMO1-202ENST00000392245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.6■□□□□ 0.25
SUMO1-202ENST00000392245 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
SUMO1-202ENST00000392245 ANKRD26Q9UPS8 1709 aa16.59■□□□□ 0.25
SUMO1-202ENST00000392245 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
SUMO1-202ENST00000392245 FKBP8Q14318 412 aa16.59■□□□□ 0.25
SUMO1-202ENST00000392245 CNTNAP4Q9C0A0 1308 aa16.59■□□□□ 0.25
SUMO1-202ENST00000392245 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms