RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 NWD2Q9ULI1 1742 aa15.42■□□□□ 0.06
VIL1-202ENST00000392114 ADAMTS2O95450 1211 aa15.42■□□□□ 0.06
VIL1-202ENST00000392114 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
VIL1-202ENST00000392114 STK31Q9BXU1 1019 aa15.42■□□□□ 0.06
VIL1-202ENST00000392114 THRAP3Q9Y2W1 955 aaKnown RBP15.42■□□□□ 0.06
VIL1-202ENST00000392114 SPATA31A6Q5VVP1 1343 aa15.41■□□□□ 0.06
VIL1-202ENST00000392114 PLCH1Q4KWH8 1693 aa15.41■□□□□ 0.06
VIL1-202ENST00000392114 NUTM2BA6NNL0 878 aaPredicted RBP15.41■□□□□ 0.06
VIL1-202ENST00000392114 NUTM2EB1AL46 878 aaPredicted RBP15.41■□□□□ 0.06
VIL1-202ENST00000392114 NUTM2AQ8IVF1 878 aaPredicted RBP15.41■□□□□ 0.06
VIL1-202ENST00000392114 SLC52A2Q9HAB3 445 aa15.4■□□□□ 0.06
VIL1-202ENST00000392114 DDX19BQ9UMR2 479 aa15.4■□□□□ 0.06
VIL1-202ENST00000392114 SIPA1L3O60292 1781 aaPredicted RBP15.4■□□□□ 0.06
VIL1-202ENST00000392114 PTPRCP08575 1304 aa15.39■□□□□ 0.05
VIL1-202ENST00000392114 CYP27B1O15528 508 aa15.39■□□□□ 0.05
VIL1-202ENST00000392114 TRIM27P14373 513 aa15.39■□□□□ 0.05
VIL1-202ENST00000392114 MVPQ14764 893 aaKnown RBP15.39■□□□□ 0.05
VIL1-202ENST00000392114 PANK1Q8TE04 598 aa15.39■□□□□ 0.05
VIL1-202ENST00000392114 COG6Q9Y2V7 657 aa15.39■□□□□ 0.05
VIL1-202ENST00000392114 ERVV-2B6SEH9 535 aa15.38■□□□□ 0.05
VIL1-202ENST00000392114 EIF4A1P60842 406 aaKnown RBP15.38■□□□□ 0.05
VIL1-202ENST00000392114 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
VIL1-202ENST00000392114 CLUAP1Q96AJ1 413 aa15.38■□□□□ 0.05
VIL1-202ENST00000392114 USP35Q9P2H5 1018 aa15.38■□□□□ 0.05
VIL1-202ENST00000392114 CABP4P57796 275 aa15.38■□□□□ 0.05
VIL1-202ENST00000392114 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
VIL1-202ENST00000392114 KRT24Q2M2I5 525 aa15.37■□□□□ 0.05
VIL1-202ENST00000392114 KDM6AO15550 1401 aaPredicted RBP15.36■□□□□ 0.05
VIL1-202ENST00000392114 EXOC5O00471 708 aa15.36■□□□□ 0.05
VIL1-202ENST00000392114 TTC5Q8N0Z6 440 aa15.36■□□□□ 0.05
VIL1-202ENST00000392114 NFATC2IPQ8NCF5 419 aa15.36■□□□□ 0.05
VIL1-202ENST00000392114 MRC1P22897 1456 aa15.36■□□□□ 0.05
VIL1-202ENST00000392114 NRAPQ86VF7 1730 aa15.36■□□□□ 0.05
VIL1-202ENST00000392114 SLIT2O94813 1529 aa15.35■□□□□ 0.05
VIL1-202ENST00000392114 RLBP1P12271 317 aa15.35■□□□□ 0.05
VIL1-202ENST00000392114 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
VIL1-202ENST00000392114 ZNF790Q6PG37 636 aa15.35■□□□□ 0.05
VIL1-202ENST00000392114 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
VIL1-202ENST00000392114 DDX54Q8TDD1 881 aaKnown RBP15.35■□□□□ 0.05
VIL1-202ENST00000392114 NGLY1Q96IV0 654 aa15.35■□□□□ 0.05
VIL1-202ENST00000392114 SPATA31A1Q5TZJ5 1347 aa15.34■□□□□ 0.05
VIL1-202ENST00000392114 UNC5CLQ8IV45 518 aa15.34■□□□□ 0.05
VIL1-202ENST00000392114 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.05
VIL1-202ENST00000392114 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.05
VIL1-202ENST00000392114 DISP2A7MBM2 1401 aa15.33■□□□□ 0.04
VIL1-202ENST00000392114 CENPQQ7L2Z9 268 aaPredicted RBP15.33■□□□□ 0.04
VIL1-202ENST00000392114 ABCC4O15439 1325 aa15.33■□□□□ 0.04
VIL1-202ENST00000392114 HEG1Q9ULI3 1381 aa15.32■□□□□ 0.04
VIL1-202ENST00000392114 SHANK3Q9BYB0 1731 aa15.32■□□□□ 0.04
VIL1-202ENST00000392114 GIGYF1O75420 1035 aaPredicted RBP15.32■□□□□ 0.04
VIL1-202ENST00000392114 BARGINQ6ZT62 677 aa15.32■□□□□ 0.04
VIL1-202ENST00000392114 TMEM57Q8N5G2 664 aa15.32■□□□□ 0.04
VIL1-202ENST00000392114 CCDC9Q9Y3X0 531 aaKnown RBP15.32■□□□□ 0.04
VIL1-202ENST00000392114 SPATA31A5Q5VU36 1347 aa15.32■□□□□ 0.04
VIL1-202ENST00000392114 SPATA31A7Q8IWB4 1347 aa15.32■□□□□ 0.04
VIL1-202ENST00000392114 FMNL2Q96PY5 1086 aa15.31■□□□□ 0.04
VIL1-202ENST00000392114 DBF4Q9UBU7 674 aaPredicted RBP15.31■□□□□ 0.04
VIL1-202ENST00000392114 TNNQ9UQP3 1299 aa15.31■□□□□ 0.04
VIL1-202ENST00000392114 KCNQ3O43525 872 aa15.3■□□□□ 0.04
VIL1-202ENST00000392114 EIF2S2P20042 333 aaKnown RBP15.3■□□□□ 0.04
VIL1-202ENST00000392114 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
VIL1-202ENST00000392114 C8orf37Q96NL8 207 aa15.3■□□□□ 0.04
VIL1-202ENST00000392114 SNRPA1P09661 255 aaKnown RBP15.29■□□□□ 0.04
VIL1-202ENST00000392114 VPS72Q15906 364 aa15.29■□□□□ 0.04
VIL1-202ENST00000392114 DDB1Q16531 1140 aa15.29■□□□□ 0.04
VIL1-202ENST00000392114 MEX3CQ5U5Q3 659 aaKnown RBP15.29■□□□□ 0.04
VIL1-202ENST00000392114 INTS3Q68E01 1043 aaKnown RBP15.29■□□□□ 0.04
VIL1-202ENST00000392114 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
VIL1-202ENST00000392114 HSPA1LP34931 641 aa15.29■□□□□ 0.04
VIL1-202ENST00000392114 CCT4P50991 539 aaKnown RBP15.29■□□□□ 0.04
VIL1-202ENST00000392114 FLIIQ13045 1269 aa15.29■□□□□ 0.04
VIL1-202ENST00000392114 TMOD3Q9NYL9 352 aa15.29■□□□□ 0.04
VIL1-202ENST00000392114 FKBP5Q13451 457 aaPredicted RBP15.28■□□□□ 0.04
VIL1-202ENST00000392114 HYPKQ9NX55 129 aa15.28■□□□□ 0.04
VIL1-202ENST00000392114 TNS2Q63HR2 1409 aa15.28■□□□□ 0.04
VIL1-202ENST00000392114 LRP6O75581 1613 aa15.28■□□□□ 0.04
VIL1-202ENST00000392114 SLC39A6Q13433 755 aa15.27■□□□□ 0.04
VIL1-202ENST00000392114 ZBTB40Q9NUA8 1239 aa15.27■□□□□ 0.04
VIL1-202ENST00000392114 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.27■□□□□ 0.04
VIL1-202ENST00000392114 KAT6BQ8WYB5 2073 aa15.27■□□□□ 0.03
VIL1-202ENST00000392114 ZBTB7BO15156 539 aaPredicted RBP15.27■□□□□ 0.03
VIL1-202ENST00000392114 NECTIN2Q92692 538 aa15.27■□□□□ 0.03
VIL1-202ENST00000392114 USP21Q9UK80 565 aa15.26■□□□□ 0.03
VIL1-202ENST00000392114 ZNF496Q96IT1 587 aaPredicted RBP15.25■□□□□ 0.03
VIL1-202ENST00000392114 DDX21Q9NR30 783 aaKnown RBP eCLIP15.25■□□□□ 0.03
VIL1-202ENST00000392114 KDM2BQ8NHM5 1336 aa15.25■□□□□ 0.03
VIL1-202ENST00000392114 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
VIL1-202ENST00000392114 G2E3Q7L622 706 aa15.25■□□□□ 0.03
VIL1-202ENST00000392114 TEX13AQ9BXU3 409 aaPredicted RBP15.25■□□□□ 0.03
VIL1-202ENST00000392114 CHPF2Q9P2E5 772 aa15.25■□□□□ 0.03
VIL1-202ENST00000392114 BCL9LQ86UU0 1499 aa15.25■□□□□ 0.03
VIL1-202ENST00000392114 PXDNLA1KZ92 1463 aa15.24■□□□□ 0.03
VIL1-202ENST00000392114 ITGB4P16144 1822 aa15.24■□□□□ 0.03
VIL1-202ENST00000392114 ERBB4Q15303 1308 aa15.24■□□□□ 0.03
VIL1-202ENST00000392114 UBR2Q8IWV8 1755 aa15.23■□□□□ 0.03
VIL1-202ENST00000392114 RGS12O14924 1447 aa15.23■□□□□ 0.03
VIL1-202ENST00000392114 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
VIL1-202ENST00000392114 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
VIL1-202ENST00000392114 PAPPAQ13219 1627 aa15.23■□□□□ 0.03
VIL1-202ENST00000392114 VSIG10Q8N0Z9 540 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms