RNA–Protein interactions for RNA: ENST00000391877.3

DEGS1-202, Transcript of delta 4-desaturase, sphingolipid 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DEGS1, Length 1,345 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEGS1-202ENST00000391877 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
DEGS1-202ENST00000391877 LINC00116Q8NCU8 138 aa16.86■□□□□ 0.29
DEGS1-202ENST00000391877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
DEGS1-202ENST00000391877 ATP6V1AP38606 617 aa16.85■□□□□ 0.29
DEGS1-202ENST00000391877 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
DEGS1-202ENST00000391877 KDRP35968 1356 aa16.85■□□□□ 0.29
DEGS1-202ENST00000391877 ITPK1Q13572 414 aa16.84■□□□□ 0.29
DEGS1-202ENST00000391877 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
DEGS1-202ENST00000391877 AMIGO3Q86WK7 504 aa16.84■□□□□ 0.29
DEGS1-202ENST00000391877 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
DEGS1-202ENST00000391877 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
DEGS1-202ENST00000391877 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
DEGS1-202ENST00000391877 ZNF530Q6P9A1 599 aaPredicted RBP16.82■□□□□ 0.28
DEGS1-202ENST00000391877 KIF7Q2M1P5 1343 aa16.82■□□□□ 0.28
DEGS1-202ENST00000391877 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
DEGS1-202ENST00000391877 PHF14O94880 888 aa16.81■□□□□ 0.28
DEGS1-202ENST00000391877 IL13P35225 146 aa16.81■□□□□ 0.28
DEGS1-202ENST00000391877 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
DEGS1-202ENST00000391877 SCN11AQ9UI33 1791 aa16.81■□□□□ 0.28
DEGS1-202ENST00000391877 GNPATO15228 680 aa16.8■□□□□ 0.28
DEGS1-202ENST00000391877 YBX3P16989 372 aaKnown RBP eCLIP16.8■□□□□ 0.28
DEGS1-202ENST00000391877 MTHFSP49914 203 aa16.8■□□□□ 0.28
DEGS1-202ENST00000391877 C1orf141Q5JVX7 400 aa16.8■□□□□ 0.28
DEGS1-202ENST00000391877 AEBP1Q8IUX7 1158 aa16.8■□□□□ 0.28
DEGS1-202ENST00000391877 PER1O15534 1290 aaPredicted RBP16.79■□□□□ 0.28
DEGS1-202ENST00000391877 CABP4P57796 275 aa16.79■□□□□ 0.28
DEGS1-202ENST00000391877 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
DEGS1-202ENST00000391877 SULT6B1Q6IMI4 303 aa16.79■□□□□ 0.28
DEGS1-202ENST00000391877 SLC4A9Q96Q91 983 aa16.79■□□□□ 0.28
DEGS1-202ENST00000391877 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
DEGS1-202ENST00000391877 MYH14Q7Z406 1995 aaKnown RBP16.79■□□□□ 0.28
DEGS1-202ENST00000391877 CICQ96RK0 1608 aaPredicted RBP16.78■□□□□ 0.28
DEGS1-202ENST00000391877 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
DEGS1-202ENST00000391877 KIF13BQ9NQT8 1826 aa16.78■□□□□ 0.28
DEGS1-202ENST00000391877 CNTNAP4Q9C0A0 1308 aa16.78■□□□□ 0.28
DEGS1-202ENST00000391877 SMIM5Q71RC9 77 aa16.77■□□□□ 0.28
DEGS1-202ENST00000391877 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.28
DEGS1-202ENST00000391877 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
DEGS1-202ENST00000391877 VIRMAQ69YN4 1812 aaKnown RBP16.77■□□□□ 0.27
DEGS1-202ENST00000391877 RPS6KA4O75676 772 aa16.76■□□□□ 0.27
DEGS1-202ENST00000391877 NPC1L1Q9UHC9 1359 aa16.76■□□□□ 0.27
DEGS1-202ENST00000391877 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
DEGS1-202ENST00000391877 NFATC2IPQ8NCF5 419 aa16.75■□□□□ 0.27
DEGS1-202ENST00000391877 C1QTNF8P60827 252 aa16.73■□□□□ 0.27
DEGS1-202ENST00000391877 ARHGEF1Q92888 912 aaKnown RBP16.73■□□□□ 0.27
DEGS1-202ENST00000391877 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
DEGS1-202ENST00000391877 MMP10P09238 476 aa16.72■□□□□ 0.27
DEGS1-202ENST00000391877 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
DEGS1-202ENST00000391877 TJP1Q07157 1748 aa16.72■□□□□ 0.27
DEGS1-202ENST00000391877 RFC4P35249 363 aa16.71■□□□□ 0.27
DEGS1-202ENST00000391877 TGFB2P61812 414 aa16.71■□□□□ 0.27
DEGS1-202ENST00000391877 SLC52A2Q9HAB3 445 aa16.71■□□□□ 0.27
DEGS1-202ENST00000391877 MRC1P22897 1456 aa16.71■□□□□ 0.27
DEGS1-202ENST00000391877 KIAA1551Q9HCM1 1747 aa16.71■□□□□ 0.27
DEGS1-202ENST00000391877 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
DEGS1-202ENST00000391877 PTCD1O75127 700 aaKnown RBP16.7■□□□□ 0.26
DEGS1-202ENST00000391877 GYS1P13807 737 aa16.7■□□□□ 0.26
DEGS1-202ENST00000391877 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
DEGS1-202ENST00000391877 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
DEGS1-202ENST00000391877 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
DEGS1-202ENST00000391877 ADCY9O60503 1353 aa16.69■□□□□ 0.26
DEGS1-202ENST00000391877 CC2D1BQ5T0F9 858 aaKnown RBP16.69■□□□□ 0.26
DEGS1-202ENST00000391877 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
DEGS1-202ENST00000391877 N4BP2Q86UW6 1770 aaPredicted RBP16.68■□□□□ 0.26
DEGS1-202ENST00000391877 PXDNLA1KZ92 1463 aa16.68■□□□□ 0.26
DEGS1-202ENST00000391877 HMOX1P09601 288 aa16.68■□□□□ 0.26
DEGS1-202ENST00000391877 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
DEGS1-202ENST00000391877 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
DEGS1-202ENST00000391877 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
DEGS1-202ENST00000391877 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
DEGS1-202ENST00000391877 COL3A1P02461 1466 aaPredicted RBP16.66■□□□□ 0.26
DEGS1-202ENST00000391877 ATP10DQ9P241 1426 aa16.66■□□□□ 0.26
DEGS1-202ENST00000391877 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
DEGS1-202ENST00000391877 MTHFSDQ2M296 383 aaKnown RBP16.66■□□□□ 0.26
DEGS1-202ENST00000391877 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
DEGS1-202ENST00000391877 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
DEGS1-202ENST00000391877 UBR2Q8IWV8 1755 aa16.65■□□□□ 0.26
DEGS1-202ENST00000391877 ARFGEF1Q9Y6D6 1849 aa16.64■□□□□ 0.25
DEGS1-202ENST00000391877 KCPQ6ZWJ8 1503 aa16.64■□□□□ 0.25
DEGS1-202ENST00000391877 CYP19A1P11511 503 aaPredicted RBP16.63■□□□□ 0.25
DEGS1-202ENST00000391877 DNAJC10Q8IXB1 793 aa16.63■□□□□ 0.25
DEGS1-202ENST00000391877 GPBP1L1Q9HC44 474 aaPredicted RBP16.63■□□□□ 0.25
DEGS1-202ENST00000391877 CEP350Q5VT06 3117 aa16.63■□□□□ 0.25
DEGS1-202ENST00000391877 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
DEGS1-202ENST00000391877 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
DEGS1-202ENST00000391877 SOS1Q07889 1333 aaPredicted RBP16.61■□□□□ 0.25
DEGS1-202ENST00000391877 SIPA1L3O60292 1781 aaPredicted RBP16.61■□□□□ 0.25
DEGS1-202ENST00000391877 TM4SF1P30408 202 aa16.61■□□□□ 0.25
DEGS1-202ENST00000391877 SLC39A6Q13433 755 aa16.61■□□□□ 0.25
DEGS1-202ENST00000391877 FKBP8Q14318 412 aa16.61■□□□□ 0.25
DEGS1-202ENST00000391877 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
DEGS1-202ENST00000391877 SRP68Q9UHB9 627 aaKnown RBP16.61■□□□□ 0.25
DEGS1-202ENST00000391877 ZPR1O75312 459 aa16.6■□□□□ 0.25
DEGS1-202ENST00000391877 DPEP1P16444 411 aa16.6■□□□□ 0.25
DEGS1-202ENST00000391877 KCNA3P22001 575 aa16.6■□□□□ 0.25
DEGS1-202ENST00000391877 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
DEGS1-202ENST00000391877 GNAT3A8MTJ3 354 aa16.59■□□□□ 0.25
DEGS1-202ENST00000391877 DDR1Q08345 913 aa16.59■□□□□ 0.25
DEGS1-202ENST00000391877 NARFQ9UHQ1 456 aa16.59■□□□□ 0.25
DEGS1-202ENST00000391877 WWC3Q9ULE0 1092 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms