RNA–Protein interactions for RNA: ENST00000391307.1

RNU1-139P-201, Transcript of RNA, U1 small nuclear 139, pseudogene, humanhuman

BASIC

Gene RNU1-139P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-139P-201ENST00000391307 KIAA1024Q9UPX6 916 aa4.93□□□□□ -1.62
RNU1-139P-201ENST00000391307 NOD1Q9Y239 953 aa4.93□□□□□ -1.62
RNU1-139P-201ENST00000391307 PCDHGA11Q9Y5H2 935 aa4.93□□□□□ -1.62
RNU1-139P-201ENST00000391307 GPR25O00155 361 aa4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 ATP9BO43861 1147 aa4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 INHAP05111 366 aa4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 C4orf17Q53FE4 359 aa4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 RNFT1Q5M7Z0 435 aa4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 NFATC2IPQ8NCF5 419 aa4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 CALR3Q96L12 384 aaKnown RBP4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 TIMMDC1Q9NPL8 285 aa4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 TFIP11Q9UBB9 837 aaKnown RBP4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 USP3Q9Y6I4 520 aa4.92□□□□□ -1.62
RNU1-139P-201ENST00000391307 SPATA31C2B4DYI2 1134 aa4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 PLA2G4AP47712 749 aa4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 CLDN10P78369 228 aa4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 ZNF837Q96EG3 531 aaPredicted RBP4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 ZNF594Q96JF6 807 aaPredicted RBP4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 CNTNAP3BQ96NU0 1288 aa4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 COL25A1Q9BXS0 654 aaPredicted RBP4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 CNTNAP3Q9BZ76 1288 aa4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 ZNF358Q9NW07 568 aa4.91□□□□□ -1.62
RNU1-139P-201ENST00000391307 PALM3A6NDB9 673 aaPredicted RBP4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 LORP23490 312 aaPredicted RBP4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 GTF2E1P29083 439 aaPredicted RBP4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 SMTNP53814 917 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 DBN1Q16643 649 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 GNASQ5JWF2 1037 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 TBCELQ5QJ74 424 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 SV2AQ7L0J3 742 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 TPCN2Q8NHX9 752 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 NANOS1Q8WY41 292 aaKnown RBP4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 RUBCNLQ9H714 662 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 MKRN1Q9UHC7 482 aaKnown RBP4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 DYRK1BQ9Y463 629 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 MAFBQ9Y5Q3 323 aaPredicted RBP4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 GTF3C3Q9Y5Q9 886 aa4.9□□□□□ -1.63
RNU1-139P-201ENST00000391307 THBS1P07996 1170 aa4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 INSM1Q01101 510 aaPredicted RBP4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 PPARGC1BQ86YN6 1023 aaKnown RBP4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 PLEKHM2Q8IWE5 1019 aa4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 OGFOD1Q8N543 542 aa4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 RHBDD1Q8TEB9 315 aa4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 GTPBP3Q969Y2 492 aaKnown RBP4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 PPP1R12CQ9BZL4 782 aa4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 PARP3Q9Y6F1 533 aa4.89□□□□□ -1.63
RNU1-139P-201ENST00000391307 A6NJY4 79 aa4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 ZBTB7BO15156 539 aaPredicted RBP4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 LGR5O75473 907 aa4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 MSX1P28360 303 aa4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 LMOD1P29536 600 aaPredicted RBP4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 GAS6Q14393 721 aa4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 TRIM22Q8IYM9 498 aa4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 TNS4Q8IZW8 715 aa4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 AIDAQ96BJ3 306 aa4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 DNAAF2Q9NVR5 837 aaKnown RBP4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 IQSEC3Q9UPP2 1182 aaPredicted RBP4.88□□□□□ -1.63
RNU1-139P-201ENST00000391307 A0A1B0GTH6 734 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 SFI1A8K8P3 1242 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 LZTS3O60299 673 aaPredicted RBP4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 F11P03951 625 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 RASA1P20936 1047 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 CDCA8Q53HL2 280 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 CCDC102BQ68D86 513 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 TRIM50Q86XT4 487 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 ZNF295-AS1Q8N0V1 137 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 ZSCAN1Q8NBB4 408 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 NUCKS1Q9H1E3 243 aaKnown RBP4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 CABP1Q9NZU7 370 aa4.87□□□□□ -1.63
RNU1-139P-201ENST00000391307 ARID3CA6NKF2 412 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 ATP4AP20648 1035 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 RFX1P22670 979 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 ATP1A2P50993 1020 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 EPHA4P54764 986 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 MTFR1Q15390 333 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 CRTC2Q53ET0 693 aaPredicted RBP4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 WDR44Q5JSH3 913 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 CFAP70Q5T0N1 1121 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 SH3PXD2AQ5TCZ1 1133 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 SLC9A9Q8IVB4 645 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 TSEN2Q8NCE0 465 aaKnown RBP4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 GAS2L2Q8NHY3 880 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 WHAMMQ8TF30 809 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 SLC4A9Q96Q91 983 aa4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 NIFKQ9BYG3 293 aaKnown RBP4.86□□□□□ -1.63
RNU1-139P-201ENST00000391307 H7C1W4 665 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 BACH1O14867 736 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 DKK1O94907 266 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 CSB-PGBD3P0DP91 1061 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 TXLNAP40222 546 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 KANK4Q5T7N3 995 aaPredicted RBP4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 PGBD3Q8N328 593 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 ZDHHC1Q8WTX9 485 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 KLRG1Q96E93 195 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 ZMYND15Q9H091 742 aa4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 TSPAN10Q9H1Z9 355 aaPredicted RBP4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 SCHIP1Q9P0W5 487 aaPredicted RBP4.85□□□□□ -1.63
RNU1-139P-201ENST00000391307 USP17L15C9J2P7 530 aa4.84□□□□□ -1.63
RNU1-139P-201ENST00000391307 USP17L10C9JJH3 530 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms