RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 GPR20Q99678 358 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 CFHR5Q9BXR6 569 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 ZCCHC4Q9H5U6 513 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 POLMQ9NP87 494 aaPredicted RBP0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 USP21Q9UK80 565 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 PALD1Q9ULE6 856 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 HRH3Q9Y5N1 445 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 CARMIL2Q6F5E8 1435 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 LRRC10BA6NIK2 292 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 NEURL1BA8MQ27 555 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 KRTAP9-6A8MVA2 160 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 PROB1E7EW31 1015 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 CYR61O00622 381 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 NFIBO00712 420 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 SLPIP03973 132 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 PRNPP04156 253 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 NR3C2P08235 984 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 SLC10A3P09131 477 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 SELPP16109 830 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 TACR2P21452 398 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 ADH6P28332 368 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 CTGFP29279 349 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 CTSOP43234 321 aaPredicted RBP0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 INHBEP58166 350 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 RAC1P63000 192 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 NBR1Q14596 966 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 GPR162Q16538 588 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 DBN1Q16643 649 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 Q3C1V9 767 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 ATG9BQ674R7 924 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 MSL1Q68DK7 614 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 PTCRAQ6ISU1 281 aaPredicted RBP0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 BRICD5Q6PL45 260 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 PAXIP1Q6ZW49 1069 aaPredicted RBP0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 LYSMD3Q7Z3D4 306 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 GLCCI1Q86VQ1 547 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 TP53INP2Q8IXH6 220 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 FAM168AQ92567 244 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 CDK15Q96Q40 435 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 INSM2Q96T92 566 aaPredicted RBP0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 BCL11BQ9C0K0 894 aaPredicted RBP0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 NUCKS1Q9H1E3 243 aaKnown RBP0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 SEMA6CQ9H3T2 930 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 TMEM134Q9H6X4 195 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 PRDM6Q9NQX0 595 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 IGSF5Q9NSI5 407 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 TAOK2Q9UL54 1235 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 DYRK1BQ9Y463 629 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 EMILIN1Q9Y6C2 1016 aa0.22□□□□□ -2.37
TRAJ28-201ENST00000390509 TRIOBPQ9H2D6 2365 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 NPIPB6E9PJ23 425 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 MATN3O15232 486 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 NUAK1O60285 661 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 PPFIA2O75334 1257 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 PPP1R37O75864 691 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 C6P13671 934 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 FSHRP23945 695 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 ATP6V1AP38606 617 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 PURAQ00577 322 aaKnown RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 NFIAQ12857 509 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 LBRQ14739 615 aaKnown RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 ARID5BQ14865 1188 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 SMN1Q16637 294 aaKnown RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 RTN1Q16799 776 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 TIGD5Q53EQ6 642 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 CRTC2Q53ET0 693 aaPredicted RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF362Q5T0B9 420 aaPredicted RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 GDF6Q6KF10 455 aaPredicted RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 PADI6Q6TGC4 694 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 Q6ZVU0 165 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 SYDE1Q6ZW31 735 aaPredicted RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 USP51Q70EK9 711 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 ATG4DQ86TL0 474 aaPredicted RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 SCUBE1Q8IWY4 988 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 ZNF511Q8NB15 262 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 FLCNQ8NFG4 579 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 WFDC12Q8WWY7 111 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 VOPP1Q96AW1 172 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 EYA1Q99502 592 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 DBNDD2Q9BQY9 259 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 SCAND2PQ9GZW5 306 aaPredicted RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 CRISPLD2Q9H0B8 497 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 KCNK12Q9HB15 430 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 PGPEP1Q9NXJ5 209 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 C11orf21Q9P2W6 132 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 STOML1Q9UBI4 398 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 ATXN7L1Q9ULK2 861 aaPredicted RBP0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 SLC27A5Q9Y2P5 690 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 RAXQ9Y2V3 346 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 STK24Q9Y6E0 443 aa0.21□□□□□ -2.38
TRAJ28-201ENST00000390509 ELOA3CA0A087WX78 387 aaPredicted RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 A0A0A0MRY4 1105 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 TCAF2A6NFQ2 919 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 PRR19A6NJB7 356 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ELOA3DA6NLF2 546 aaPredicted RBP0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 CYSRT1A8MQ03 144 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 ERVV-2B6SEH9 535 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 M0R082 166 aa0.2□□□□□ -2.38
TRAJ28-201ENST00000390509 C2CD2LO14523 706 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms