RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
TRAV3-201ENST00000390425 TJP1Q07157 1748 aa15.18■□□□□ 0.02
TRAV3-201ENST00000390425 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
TRAV3-201ENST00000390425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.17■□□□□ 0.02
TRAV3-201ENST00000390425 PHF14O94880 888 aa15.17■□□□□ 0.02
TRAV3-201ENST00000390425 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
TRAV3-201ENST00000390425 PELP1Q8IZL8 1130 aaKnown RBP15.17■□□□□ 0.02
TRAV3-201ENST00000390425 ATG3Q9NT62 314 aa15.17■□□□□ 0.02
TRAV3-201ENST00000390425 SLC4A9Q96Q91 983 aa15.16■□□□□ 0.02
TRAV3-201ENST00000390425 HMGB2P26583 209 aaKnown RBP15.15■□□□□ 0.02
TRAV3-201ENST00000390425 SSFA2P28290 1259 aa15.15■□□□□ 0.02
TRAV3-201ENST00000390425 GNPATO15228 680 aa15.14■□□□□ 0.01
TRAV3-201ENST00000390425 ATP6V1AP38606 617 aa15.14■□□□□ 0.01
TRAV3-201ENST00000390425 MORC1Q86VD1 984 aa15.14■□□□□ 0.01
TRAV3-201ENST00000390425 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
TRAV3-201ENST00000390425 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
TRAV3-201ENST00000390425 KIF7Q2M1P5 1343 aa15.14■□□□□ 0.01
TRAV3-201ENST00000390425 N4BP2Q86UW6 1770 aaPredicted RBP15.13■□□□□ 0.01
TRAV3-201ENST00000390425 ERVV-2B6SEH9 535 aa15.13■□□□□ 0.01
TRAV3-201ENST00000390425 AMER1Q5JTC6 1135 aaPredicted RBP15.13■□□□□ 0.01
TRAV3-201ENST00000390425 ADAMTS7Q9UKP4 1686 aa15.12■□□□□ 0.01
TRAV3-201ENST00000390425 ZNF530Q6P9A1 599 aaPredicted RBP15.12■□□□□ 0.01
TRAV3-201ENST00000390425 DCAF5Q96JK2 942 aa15.12■□□□□ 0.01
TRAV3-201ENST00000390425 IL13P35225 146 aa15.11■□□□□ 0.01
TRAV3-201ENST00000390425 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
TRAV3-201ENST00000390425 KNSTRNQ9Y448 316 aa15.11■□□□□ 0.01
TRAV3-201ENST00000390425 GRIN3BO60391 1043 aa15.1■□□□□ 0.01
TRAV3-201ENST00000390425 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
TRAV3-201ENST00000390425 AMOTQ4VCS5 1084 aa15.1■□□□□ 0.01
TRAV3-201ENST00000390425 SULT6B1Q6IMI4 303 aa15.1■□□□□ 0.01
TRAV3-201ENST00000390425 MRC1P22897 1456 aa15.09■□□□□ 0.01
TRAV3-201ENST00000390425 CNTNAP4Q9C0A0 1308 aa15.09■□□□□ 0.01
TRAV3-201ENST00000390425 UBR2Q8IWV8 1755 aa15.08■□□□□ 0.01
TRAV3-201ENST00000390425 PXDNLA1KZ92 1463 aa15.08■□□□□ 0.01
TRAV3-201ENST00000390425 CABP4P57796 275 aa15.08■□□□□ 0
TRAV3-201ENST00000390425 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0
TRAV3-201ENST00000390425 ADCY9O60503 1353 aa15.08■□□□□ 0
TRAV3-201ENST00000390425 ATP10DQ9P241 1426 aa15.08■□□□□ 0
TRAV3-201ENST00000390425 COL3A1P02461 1466 aaPredicted RBP15.08■□□□□ 0
TRAV3-201ENST00000390425 PER1O15534 1290 aaPredicted RBP15.07■□□□□ 0
TRAV3-201ENST00000390425 MTHFSP49914 203 aa15.07■□□□□ 0
TRAV3-201ENST00000390425 C1QTNF8P60827 252 aa15.07■□□□□ 0
TRAV3-201ENST00000390425 C10orf71Q711Q0 1435 aa15.07■□□□□ 0
TRAV3-201ENST00000390425 MMP10P09238 476 aa15.06■□□□□ 0
TRAV3-201ENST00000390425 RC3H1Q5TC82 1133 aaKnown RBP15.06■□□□□ 0
TRAV3-201ENST00000390425 WWC3Q9ULE0 1092 aa15.06■□□□□ 0
TRAV3-201ENST00000390425 RTCBQ9Y3I0 505 aaKnown RBP15.06■□□□□ 0
TRAV3-201ENST00000390425 SIPA1L3O60292 1781 aaPredicted RBP15.06■□□□□ 0
TRAV3-201ENST00000390425 ARFGEF1Q9Y6D6 1849 aa15.06■□□□□ 0
TRAV3-201ENST00000390425 C1orf141Q5JVX7 400 aa15.05■□□□□ -0
TRAV3-201ENST00000390425 NFATC2IPQ8NCF5 419 aa15.05■□□□□ -0
TRAV3-201ENST00000390425 ARHGEF1Q92888 912 aaKnown RBP15.05■□□□□ -0
TRAV3-201ENST00000390425 KCPQ6ZWJ8 1503 aa15.05■□□□□ -0
TRAV3-201ENST00000390425 RPS6KA4O75676 772 aa15.04■□□□□ -0
TRAV3-201ENST00000390425 ADRA2BP18089 450 aa15.04■□□□□ -0
TRAV3-201ENST00000390425 TRAPPC3LQ5T215 181 aa15.04■□□□□ -0
TRAV3-201ENST00000390425 AFDNP55196 1824 aaKnown RBP15.03■□□□□ -0
TRAV3-201ENST00000390425 PTCD1O75127 700 aaKnown RBP15.03■□□□□ -0
TRAV3-201ENST00000390425 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
TRAV3-201ENST00000390425 GYS1P13807 737 aa15.03■□□□□ -0
TRAV3-201ENST00000390425 HMOX1P09601 288 aa15.02■□□□□ -0
TRAV3-201ENST00000390425 CRKLP46109 303 aaKnown RBP15.02■□□□□ -0
TRAV3-201ENST00000390425 AKAP4Q5JQC9 854 aa15.02■□□□□ -0
TRAV3-201ENST00000390425 CC2D1BQ5T0F9 858 aaKnown RBP15.02■□□□□ -0
TRAV3-201ENST00000390425 NPC1L1Q9UHC9 1359 aa15.01□□□□□ -0.01
TRAV3-201ENST00000390425 SENP3-EIF4A1A0A087X0R7 540 aa15.01□□□□□ -0.01
TRAV3-201ENST00000390425 NLGN1Q8N2Q7 840 aa15.01□□□□□ -0.01
TRAV3-201ENST00000390425 LGR6Q9HBX8 967 aa15.01□□□□□ -0.01
TRAV3-201ENST00000390425 CEP350Q5VT06 3117 aa15.01□□□□□ -0.01
TRAV3-201ENST00000390425 SLC52A2Q9HAB3 445 aa15□□□□□ -0.01
TRAV3-201ENST00000390425 SRP68Q9UHB9 627 aaKnown RBP15□□□□□ -0.01
TRAV3-201ENST00000390425 NRXN2Q9P2S2 1712 aa15□□□□□ -0.01
TRAV3-201ENST00000390425 USP42Q9H9J4 1324 aaKnown RBP14.99□□□□□ -0.01
TRAV3-201ENST00000390425 DLEC1Q9Y238 1755 aa14.99□□□□□ -0.01
TRAV3-201ENST00000390425 RNMTO43148 476 aaKnown RBP14.99□□□□□ -0.01
TRAV3-201ENST00000390425 RFC4P35249 363 aa14.99□□□□□ -0.01
TRAV3-201ENST00000390425 MTHFSDQ2M296 383 aaKnown RBP14.99□□□□□ -0.01
TRAV3-201ENST00000390425 INTS5Q6P9B9 1019 aaKnown RBP14.99□□□□□ -0.01
TRAV3-201ENST00000390425 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
TRAV3-201ENST00000390425 FKBP8Q14318 412 aa14.98□□□□□ -0.01
TRAV3-201ENST00000390425 DNAJC10Q8IXB1 793 aa14.98□□□□□ -0.01
TRAV3-201ENST00000390425 DDR1Q08345 913 aa14.97□□□□□ -0.01
TRAV3-201ENST00000390425 SLC39A6Q13433 755 aa14.97□□□□□ -0.01
TRAV3-201ENST00000390425 CCDC87Q9NVE4 849 aa14.97□□□□□ -0.01
TRAV3-201ENST00000390425 SBF1O95248 1867 aa14.97□□□□□ -0.01
TRAV3-201ENST00000390425 SOS1Q07889 1333 aaPredicted RBP14.96□□□□□ -0.01
TRAV3-201ENST00000390425 A0A0G2JLW4 131 aa14.96□□□□□ -0.01
TRAV3-201ENST00000390425 DPEP1P16444 411 aa14.96□□□□□ -0.01
TRAV3-201ENST00000390425 TGFB2P61812 414 aa14.96□□□□□ -0.01
TRAV3-201ENST00000390425 SCN7AQ01118 1682 aa14.96□□□□□ -0.01
TRAV3-201ENST00000390425 CYP19A1P11511 503 aaPredicted RBP14.95□□□□□ -0.02
TRAV3-201ENST00000390425 ZNF526Q8TF50 670 aaPredicted RBP14.95□□□□□ -0.02
TRAV3-201ENST00000390425 GPBP1L1Q9HC44 474 aaPredicted RBP14.95□□□□□ -0.02
TRAV3-201ENST00000390425 PARP3Q9Y6F1 533 aa14.95□□□□□ -0.02
TRAV3-201ENST00000390425 KCNA3P22001 575 aa14.94□□□□□ -0.02
TRAV3-201ENST00000390425 BCS1LQ9Y276 419 aa14.94□□□□□ -0.02
TRAV3-201ENST00000390425 COL15A1P39059 1388 aa14.94□□□□□ -0.02
TRAV3-201ENST00000390425 ANKRD31Q8N7Z5 1873 aa14.93□□□□□ -0.02
TRAV3-201ENST00000390425 CNGB1Q14028 1251 aaPredicted RBP14.93□□□□□ -0.02
TRAV3-201ENST00000390425 ZBTB1Q9Y2K1 713 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms