RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 CHD4Q14839 1912 aa18.41■□□□□ 0.54
TRBV4-1-201ENST00000390357 GPR162Q16538 588 aa18.4■□□□□ 0.54
TRBV4-1-201ENST00000390357 AKAP4Q5JQC9 854 aa18.4■□□□□ 0.54
TRBV4-1-201ENST00000390357 RC3H1Q5TC82 1133 aaKnown RBP18.4■□□□□ 0.54
TRBV4-1-201ENST00000390357 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
TRBV4-1-201ENST00000390357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.39■□□□□ 0.53
TRBV4-1-201ENST00000390357 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
TRBV4-1-201ENST00000390357 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
TRBV4-1-201ENST00000390357 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.53
TRBV4-1-201ENST00000390357 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
TRBV4-1-201ENST00000390357 KLHL34Q8N239 644 aa18.38■□□□□ 0.53
TRBV4-1-201ENST00000390357 LINC00116Q8NCU8 138 aa18.38■□□□□ 0.53
TRBV4-1-201ENST00000390357 ITPK1Q13572 414 aa18.37■□□□□ 0.53
TRBV4-1-201ENST00000390357 NFATC2IPQ8NCF5 419 aa18.37■□□□□ 0.53
TRBV4-1-201ENST00000390357 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
TRBV4-1-201ENST00000390357 GRIN3BO60391 1043 aa18.36■□□□□ 0.53
TRBV4-1-201ENST00000390357 ADRA2BP18089 450 aa18.36■□□□□ 0.53
TRBV4-1-201ENST00000390357 TRAPPC3LQ5T215 181 aa18.36■□□□□ 0.53
TRBV4-1-201ENST00000390357 RTCBQ9Y3I0 505 aaKnown RBP18.36■□□□□ 0.53
TRBV4-1-201ENST00000390357 GNPATO15228 680 aa18.35■□□□□ 0.53
TRBV4-1-201ENST00000390357 PHF14O94880 888 aa18.35■□□□□ 0.53
TRBV4-1-201ENST00000390357 KDM6AO15550 1401 aaPredicted RBP18.34■□□□□ 0.53
TRBV4-1-201ENST00000390357 SCN11AQ9UI33 1791 aa18.33■□□□□ 0.53
TRBV4-1-201ENST00000390357 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
TRBV4-1-201ENST00000390357 MSL1Q68DK7 614 aa18.33■□□□□ 0.52
TRBV4-1-201ENST00000390357 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
TRBV4-1-201ENST00000390357 RPS6KA4O75676 772 aa18.32■□□□□ 0.52
TRBV4-1-201ENST00000390357 HMOX1P09601 288 aa18.31■□□□□ 0.52
TRBV4-1-201ENST00000390357 NLGN2Q8NFZ4 835 aa18.31■□□□□ 0.52
TRBV4-1-201ENST00000390357 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
TRBV4-1-201ENST00000390357 SLC4A9Q96Q91 983 aa18.31■□□□□ 0.52
TRBV4-1-201ENST00000390357 SLC52A2Q9HAB3 445 aa18.31■□□□□ 0.52
TRBV4-1-201ENST00000390357 AMIGO3Q86WK7 504 aa18.3■□□□□ 0.52
TRBV4-1-201ENST00000390357 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
TRBV4-1-201ENST00000390357 RFC4P35249 363 aa18.29■□□□□ 0.52
TRBV4-1-201ENST00000390357 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
TRBV4-1-201ENST00000390357 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
TRBV4-1-201ENST00000390357 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
TRBV4-1-201ENST00000390357 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
TRBV4-1-201ENST00000390357 LGR6Q9HBX8 967 aa18.28■□□□□ 0.52
TRBV4-1-201ENST00000390357 NUDCQ9Y266 331 aa18.28■□□□□ 0.52
TRBV4-1-201ENST00000390357 COL5A3P25940 1745 aaPredicted RBP18.28■□□□□ 0.52
TRBV4-1-201ENST00000390357 ZNF784Q8NCA9 323 aaPredicted RBP18.27■□□□□ 0.52
TRBV4-1-201ENST00000390357 GAS2L2Q8NHY3 880 aa18.27■□□□□ 0.52
TRBV4-1-201ENST00000390357 U2SURPO15042 1029 aaKnown RBP18.26■□□□□ 0.51
TRBV4-1-201ENST00000390357 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
TRBV4-1-201ENST00000390357 VIRMAQ69YN4 1812 aaKnown RBP18.26■□□□□ 0.51
TRBV4-1-201ENST00000390357 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
TRBV4-1-201ENST00000390357 TGFB2P61812 414 aa18.25■□□□□ 0.51
TRBV4-1-201ENST00000390357 SMIM5Q71RC9 77 aa18.25■□□□□ 0.51
TRBV4-1-201ENST00000390357 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
TRBV4-1-201ENST00000390357 MMP10P09238 476 aa18.24■□□□□ 0.51
TRBV4-1-201ENST00000390357 CRKLP46109 303 aaKnown RBP18.24■□□□□ 0.51
TRBV4-1-201ENST00000390357 MYH14Q7Z406 1995 aaKnown RBP18.24■□□□□ 0.51
TRBV4-1-201ENST00000390357 GYS1P13807 737 aa18.23■□□□□ 0.51
TRBV4-1-201ENST00000390357 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
TRBV4-1-201ENST00000390357 COL3A1P02461 1466 aaPredicted RBP18.22■□□□□ 0.51
TRBV4-1-201ENST00000390357 MRC1P22897 1456 aa18.22■□□□□ 0.51
TRBV4-1-201ENST00000390357 YBX3P16989 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRBV4-1-201ENST00000390357 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
TRBV4-1-201ENST00000390357 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
TRBV4-1-201ENST00000390357 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
TRBV4-1-201ENST00000390357 PARP3Q9Y6F1 533 aa18.22■□□□□ 0.51
TRBV4-1-201ENST00000390357 TEFQ10587 303 aa18.21■□□□□ 0.51
TRBV4-1-201ENST00000390357 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.51
TRBV4-1-201ENST00000390357 FCHSD2O94868 740 aa18.2■□□□□ 0.5
TRBV4-1-201ENST00000390357 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
TRBV4-1-201ENST00000390357 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
TRBV4-1-201ENST00000390357 UTRNP46939 3433 aa18.19■□□□□ 0.5
TRBV4-1-201ENST00000390357 KIF13BQ9NQT8 1826 aa18.19■□□□□ 0.5
TRBV4-1-201ENST00000390357 ZPR1O75312 459 aa18.19■□□□□ 0.5
TRBV4-1-201ENST00000390357 CYP19A1P11511 503 aaPredicted RBP18.19■□□□□ 0.5
TRBV4-1-201ENST00000390357 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
TRBV4-1-201ENST00000390357 TJP1Q07157 1748 aa18.18■□□□□ 0.5
TRBV4-1-201ENST00000390357 STARD3NLO95772 234 aa18.18■□□□□ 0.5
TRBV4-1-201ENST00000390357 DNAJC10Q8IXB1 793 aa18.18■□□□□ 0.5
TRBV4-1-201ENST00000390357 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
TRBV4-1-201ENST00000390357 USP42Q9H9J4 1324 aaKnown RBP18.18■□□□□ 0.5
TRBV4-1-201ENST00000390357 U2AF1L5P0DN76 240 aaPredicted RBP18.16■□□□□ 0.5
TRBV4-1-201ENST00000390357 PRKAR2BP31323 418 aa18.16■□□□□ 0.5
TRBV4-1-201ENST00000390357 U2AF1Q01081 240 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRBV4-1-201ENST00000390357 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
TRBV4-1-201ENST00000390357 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
TRBV4-1-201ENST00000390357 C4AP0C0L4 1744 aa18.15■□□□□ 0.5
TRBV4-1-201ENST00000390357 HTATSF1O43719 755 aaKnown RBP18.15■□□□□ 0.5
TRBV4-1-201ENST00000390357 NARFQ9UHQ1 456 aa18.15■□□□□ 0.5
TRBV4-1-201ENST00000390357 A0A087WZG4 1122 aa18.14■□□□□ 0.49
TRBV4-1-201ENST00000390357 NEFMP07197 916 aa18.14■□□□□ 0.49
TRBV4-1-201ENST00000390357 TM4SF1P30408 202 aa18.14■□□□□ 0.49
TRBV4-1-201ENST00000390357 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.49
TRBV4-1-201ENST00000390357 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
TRBV4-1-201ENST00000390357 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
TRBV4-1-201ENST00000390357 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
TRBV4-1-201ENST00000390357 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
TRBV4-1-201ENST00000390357 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
TRBV4-1-201ENST00000390357 FKBP8Q14318 412 aa18.13■□□□□ 0.49
TRBV4-1-201ENST00000390357 FMNL2Q96PY5 1086 aa18.13■□□□□ 0.49
TRBV4-1-201ENST00000390357 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
TRBV4-1-201ENST00000390357 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
TRBV4-1-201ENST00000390357 SRP68Q9UHB9 627 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms