RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 HCLS1P14317 486 aaPredicted RBP5.9□□□□□ -1.47
LTN1-202ENST00000389194 FLIIQ13045 1269 aa5.9□□□□□ -1.47
LTN1-202ENST00000389194 ZGPATQ8N5A5 531 aaKnown RBP5.9□□□□□ -1.47
LTN1-202ENST00000389194 RAI14Q9P0K7 980 aa5.9□□□□□ -1.47
LTN1-202ENST00000389194 CEP126Q9P2H0 1117 aa5.9□□□□□ -1.47
LTN1-202ENST00000389194 WWC3Q9ULE0 1092 aa5.9□□□□□ -1.47
LTN1-202ENST00000389194 PA2G4Q9UQ80 394 aaKnown RBP5.9□□□□□ -1.47
LTN1-202ENST00000389194 CCDC69A6NI79 296 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 MCM2P49736 904 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 GPS2Q13227 327 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 AAMPQ13685 434 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 PKNOX2Q96KN3 472 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 PLEKHH1Q9ULM0 1364 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 BAG4O95429 457 aaKnown RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 SDSP20132 328 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 PPP1R42Q7Z4L9 355 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 RPAP2Q8IXW5 612 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 CCDC112Q8NEF3 446 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 OTUD7AQ8TE49 926 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 PHACTR3Q96KR7 559 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 ZNF692Q9BU19 519 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 LRP2BPQ9P2M1 347 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 ZNF219Q9P2Y4 722 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 ZHX1Q9UKY1 873 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 ADAMTS2O95450 1211 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 USP5P45974 858 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 TEX35Q5T0J7 233 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 CCDC70Q6NSX1 233 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 TBC1D32Q96NH3 1257 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 RUFY1Q96T51 708 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 MAP3K2Q9Y2U5 619 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 EFCAB5A4FU69 1503 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 SART3Q15020 963 aaKnown RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 CFAP100Q494V2 611 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 AXDND1Q5T1B0 1012 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 TANGO6Q9C0B7 1094 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 ZSWIM4Q9H7M6 989 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 ZNF608Q9ULD9 1512 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 GOLIM4O00461 696 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 XRCC6P12956 609 aaKnown RBP eCLIP5.89□□□□□ -1.47
LTN1-202ENST00000389194 CT47A1Q5JQC4 288 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 METTL24Q5JXM2 366 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 DDX46Q7L014 1031 aaKnown RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 CCDC47Q96A33 483 aaKnown RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 PRKCSHP14314 528 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 UBE3BQ7Z3V4 1068 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 ERC1Q8IUD2 1116 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 ZNF396Q96N95 335 aaPredicted RBP5.89□□□□□ -1.47
LTN1-202ENST00000389194 CARD14Q9BXL6 1004 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 SLC52A1Q9NWF4 448 aa5.89□□□□□ -1.47
LTN1-202ENST00000389194 GJB2P29033 226 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 RBM5P52756 815 aaKnown RBP eCLIP5.88□□□□□ -1.47
LTN1-202ENST00000389194 HSP90B2PQ58FF3 399 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 ZSCAN30Q86W11 494 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 BRMS1Q9HCU9 246 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 CNPY2Q9Y2B0 182 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 MAGI1Q96QZ7 1491 aaPredicted RBP5.88□□□□□ -1.47
LTN1-202ENST00000389194 MAP3K11Q16584 847 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 KIF1BPQ96EK5 621 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 CHAMP1Q96JM3 812 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.88□□□□□ -1.47
LTN1-202ENST00000389194 AMOTL2Q9Y2J4 779 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 V9GYY5 206 aaPredicted RBP5.88□□□□□ -1.47
LTN1-202ENST00000389194 RPRD2Q5VT52 1461 aaKnown RBP5.88□□□□□ -1.47
LTN1-202ENST00000389194 A0A087WZG4 1122 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 KRT18P05783 430 aaKnown RBP5.88□□□□□ -1.47
LTN1-202ENST00000389194 STAC3Q96MF2 364 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 ARGLU1Q9NWB6 273 aaPredicted RBP5.88□□□□□ -1.47
LTN1-202ENST00000389194 TAF3Q5VWG9 929 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 CABLES1Q8TDN4 633 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 LRRC59Q96AG4 307 aaKnown RBP5.88□□□□□ -1.47
LTN1-202ENST00000389194 CDK5RAP3Q96JB5 506 aa5.88□□□□□ -1.47
LTN1-202ENST00000389194 XBP1P17861 261 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 CHPF2Q9P2E5 772 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 MAP3K1Q13233 1512 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 ADCY5O95622 1261 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 IFIT1P09914 478 aaKnown RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 POLR3GO15318 223 aaPredicted RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 DNAAF4Q8WXU2 420 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 TTC12Q9H892 705 aaPredicted RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 RNF216Q9NWF9 866 aaPredicted RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 TMX3Q96JJ7 454 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 NDUFB9Q9Y6M9 179 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 IQGAP2Q13576 1575 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 HIP1O00291 1037 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 WASLO00401 505 aaPredicted RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 ZSCAN23Q3MJ62 389 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 ZSCAN29Q8IWY8 852 aaPredicted RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 THEMISQ8N1K5 641 aaPredicted RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 AIDAQ96BJ3 306 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 PHF23Q9BUL5 403 aaPredicted RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 SEPT11Q9NVA2 429 aaKnown RBP5.87□□□□□ -1.47
LTN1-202ENST00000389194 CCDC141Q6ZP82 1450 aa5.87□□□□□ -1.47
LTN1-202ENST00000389194 LETM1O95202 739 aaPredicted RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 MICU3Q86XE3 530 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 TRIM22Q8IYM9 498 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 UBAC1Q9BSL1 405 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 MRC2Q9UBG0 1479 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 GLRX3O76003 335 aaKnown RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 PPFIBP1Q86W92 1011 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms