RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SHISA8B8ZZ34 492 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 WASLO00401 505 aaPredicted RBP1.63□□□□□ -2.15
SNORD28-201ENST00000384706 USP17L8P0C7I0 530 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 SCTRP47872 440 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 CENPCQ03188 943 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 CLN3Q13286 438 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 FZD5Q13467 585 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 SH3D19Q5HYK7 790 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 RNF20Q5VTR2 975 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 CC2D2BQ6DHV5 1058 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 C1orf229Q6ZS94 237 aaPredicted RBP1.63□□□□□ -2.15
SNORD28-201ENST00000384706 TAS1R3Q7RTX0 852 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 CNKSR1Q969H4 720 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 CFHR5Q9BXR6 569 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 FAM117AQ9C073 453 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 SUV39H2Q9H5I1 410 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 GPBP1L1Q9HC44 474 aaPredicted RBP1.63□□□□□ -2.15
SNORD28-201ENST00000384706 ARHGEF10LQ9HCE6 1279 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 RAB6BQ9NRW1 208 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 LRRC4BQ9NT99 713 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 PHF24Q9UPV7 400 aa1.63□□□□□ -2.15
SNORD28-201ENST00000384706 SPATA31C2B4DYI2 1134 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 THBS1P07996 1170 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 FBXO45P0C2W1 286 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 CSB-PGBD3P0DP91 1061 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 BMP4P12644 408 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 GTF2E1P29083 439 aaPredicted RBP1.62□□□□□ -2.15
SNORD28-201ENST00000384706 RFC5P40937 340 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 ERVK-9P63128 1117 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 CTBSQ01459 385 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 DOC2BQ14184 412 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 FOXD4L6Q3SYB3 417 aaPredicted RBP1.62□□□□□ -2.15
SNORD28-201ENST00000384706 WDR44Q5JSH3 913 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 EFHC2Q5JST6 749 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 ZMYM1Q5SVZ6 1142 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 TMEM214Q6NUQ4 689 aaKnown RBP1.62□□□□□ -2.15
SNORD28-201ENST00000384706 FOXD4L3Q6VB84 417 aaPredicted RBP1.62□□□□□ -2.15
SNORD28-201ENST00000384706 CYP2U1Q7Z449 544 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 PGBD3Q8N328 593 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 GOLGA6L1Q8N7Z2 621 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 ABHD17AQ96GS6 310 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 DDRGK1Q96HY6 314 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 BTBD6Q96KE9 485 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 ZSCAN10Q96SZ4 725 aaPredicted RBP1.62□□□□□ -2.15
SNORD28-201ENST00000384706 TRIM34Q9BYJ4 488 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 KDM4CQ9H3R0 1056 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 SEMA6BQ9H3T3 888 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 RUBCNLQ9H714 662 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 GGA1Q9UJY5 639 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 GDF2Q9UK05 429 aaPredicted RBP1.62□□□□□ -2.15
SNORD28-201ENST00000384706 PCDHB11Q9Y5F2 797 aa1.62□□□□□ -2.15
SNORD28-201ENST00000384706 A0A1B0GTH6 734 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 NEURL1BA8MQ27 555 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 PIK3R2O00459 728 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 C2CD2LO14523 706 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 GNB5O14775 395 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 BNIP3LO60238 219 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 TRAK2O60296 914 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 GNRH1P01148 92 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 IL2RAP01589 272 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 FGFR3P22607 806 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 MSX1P28360 303 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 TMEM259Q4ZIN3 620 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 C4orf17Q53FE4 359 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 GNASQ5JWF2 1037 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 ARTNQ5T4W7 220 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 LINC00114Q6XXX2 140 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 ALYREFQ86V81 257 aaKnown RBP1.61□□□□□ -2.15
SNORD28-201ENST00000384706 CD163Q86VB7 1156 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 CCDC125Q86Z20 511 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 AIDAQ96BJ3 306 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 FMNL2Q96PY5 1086 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 ESYT1Q9BSJ8 1104 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 CDCA7Q9BWT1 371 aaPredicted RBP1.61□□□□□ -2.15
SNORD28-201ENST00000384706 OSBPL3Q9H4L5 887 aa1.61□□□□□ -2.15
SNORD28-201ENST00000384706 ATXN7L1Q9ULK2 861 aaPredicted RBP1.61□□□□□ -2.15
SNORD28-201ENST00000384706 SCO2A0A1W2PP80 73 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 STAU1O95793 577 aaKnown RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 MYCP01106 439 aaPredicted RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 EPXP11678 715 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 HOXB4P17483 251 aaPredicted RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 CHRNA4P43681 627 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 GATA4P43694 442 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 MCCD1P59942 119 aaPredicted RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 NR1H3Q13133 447 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 UBAP2LQ14157 1087 aaKnown RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 TSGA10IPQ3SY00 556 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 ARSJQ5FYB0 599 aaPredicted RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 LCE4AQ5TA78 99 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 SLCO4C1Q6ZQN7 724 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 RNF135Q8IUD6 432 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 XAGE2Q96GT9 111 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 PCMTD1Q96MG8 357 aaPredicted RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 PLVAPQ9BX97 442 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 ZCCHC2Q9C0B9 1178 aaKnown RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 ZFP64Q9NPA5 681 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 NOP53Q9NZM5 478 aaKnown RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 PRR12Q9ULL5 1215 aa1.6□□□□□ -2.15
SNORD28-201ENST00000384706 ZNF330Q9Y3S2 320 aaPredicted RBP1.6□□□□□ -2.15
SNORD28-201ENST00000384706 DCDC2BA2VCK2 349 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms