RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 DHX9Q08211 1270 aaKnown RBP2.22□□□□□ -2.05
RNU6-540P-201ENST00000384622 CBLL1Q75N03 491 aa2.22□□□□□ -2.05
RNU6-540P-201ENST00000384622 RELTQ969Z4 430 aa2.22□□□□□ -2.05
RNU6-540P-201ENST00000384622 ACSS3Q9H6R3 686 aa2.22□□□□□ -2.05
RNU6-540P-201ENST00000384622 TRAPPC3LQ5T215 181 aa2.21□□□□□ -2.06
RNU6-540P-201ENST00000384622 ABHD17AQ96GS6 310 aa2.21□□□□□ -2.06
RNU6-540P-201ENST00000384622 MYRFLQ96LU7 910 aa2.21□□□□□ -2.06
RNU6-540P-201ENST00000384622 DNAJC5Q9H3Z4 198 aa2.21□□□□□ -2.06
RNU6-540P-201ENST00000384622 TIMMDC1Q9NPL8 285 aa2.21□□□□□ -2.06
RNU6-540P-201ENST00000384622 M0R082 166 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 GSC2O15499 205 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 ADH1AP07327 375 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 INHBBP09529 407 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 GUCA2AQ02747 115 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 ZNF417Q8TAU3 575 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 BORCS6Q96GS4 357 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 CRELD1Q96HD1 420 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 ZNF587Q96SQ5 575 aaPredicted RBP2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 KLF15Q9UIH9 416 aa2.2□□□□□ -2.06
RNU6-540P-201ENST00000384622 IREB2P48200 963 aaKnown RBP2.19□□□□□ -2.06
RNU6-540P-201ENST00000384622 USP46P62068 366 aa2.19□□□□□ -2.06
RNU6-540P-201ENST00000384622 LRRC56Q8IYG6 542 aaPredicted RBP2.19□□□□□ -2.06
RNU6-540P-201ENST00000384622 TRMT44Q8IYL2 757 aaKnown RBP2.19□□□□□ -2.06
RNU6-540P-201ENST00000384622 WFDC12Q8WWY7 111 aa2.19□□□□□ -2.06
RNU6-540P-201ENST00000384622 NLRP7Q8WX94 980 aa2.19□□□□□ -2.06
RNU6-540P-201ENST00000384622 C1QTNF2Q9BXJ5 285 aa2.19□□□□□ -2.06
RNU6-540P-201ENST00000384622 GPAMQ9HCL2 828 aa2.19□□□□□ -2.06
RNU6-540P-201ENST00000384622 C6orf229H3BNL8 230 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 HOXA2O43364 376 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 GTPBP6O43824 516 aaPredicted RBP2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 BNIP3LO60238 219 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 IGLV1-40P01703 118 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 UBAP2LQ14157 1087 aaKnown RBP2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 SLC27A3Q5K4L6 730 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 NBPF14Q5TI25 921 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 NBPF10Q6P3W6 841 aaKnown RBP2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 C1QL4Q86Z23 238 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 CILP2Q8IUL8 1156 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 NBPF15Q8N660 670 aa2.18□□□□□ -2.06
RNU6-540P-201ENST00000384622 A0A0A0MRY4 1105 aa2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 NUTM2FA1L443 756 aa2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 GRNP28799 593 aaKnown RBP2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 GPC1P35052 558 aa2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 RAP1GAPP47736 663 aa2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 PCBP4P57723 403 aaKnown RBP2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 LBRQ14739 615 aaKnown RBP2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 TMEM132AQ24JP5 1023 aa2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 WDR44Q5JSH3 913 aa2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 KDF1Q8NAX2 398 aaPredicted RBP2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 PRDM6Q9NQX0 595 aa2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 ANGEL1Q9UNK9 670 aaKnown RBP2.17□□□□□ -2.06
RNU6-540P-201ENST00000384622 ELOA3CA0A087WX78 387 aaPredicted RBP2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 MAGEB6P1A0A0J9YX57 407 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 ELOA3DA6NLF2 546 aaPredicted RBP2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 CSB-PGBD3P0DP91 1061 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 NID1P14543 1247 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 NOS3P29474 1203 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 RAC1P63000 192 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 ELOA3BQ3SY89 546 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 C8orf86Q6ZUL3 223 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 PGBD3Q8N328 593 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 ELOA3Q8NG57 546 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 MEGF10Q96KG7 1140 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 C20orf173Q96LM9 149 aa2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 ARIH1Q9Y4X5 557 aaPredicted RBP2.16□□□□□ -2.06
RNU6-540P-201ENST00000384622 MEN1O00255 615 aa2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 FOXD2O60548 495 aaPredicted RBP2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 PKD2Q13563 968 aa2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 EFHC2Q5JST6 749 aa2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 TP53INP2Q8IXH6 220 aa2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 BHLHE22Q8NFJ8 381 aaPredicted RBP2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 KCTD15Q96SI1 283 aaPredicted RBP2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 NDFIP2Q9NV92 336 aa2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 FAM53CQ9NYF3 392 aa2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.15□□□□□ -2.07
RNU6-540P-201ENST00000384622 CD46P15529 392 aa2.14□□□□□ -2.07
RNU6-540P-201ENST00000384622 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
RNU6-540P-201ENST00000384622 ADD1P35611 737 aaKnown RBP2.14□□□□□ -2.07
RNU6-540P-201ENST00000384622 KRTAP10-2P60368 255 aa2.14□□□□□ -2.07
RNU6-540P-201ENST00000384622 TAS1R3Q7RTX0 852 aa2.14□□□□□ -2.07
RNU6-540P-201ENST00000384622 NAF1Q96HR8 494 aaKnown RBP2.14□□□□□ -2.07
RNU6-540P-201ENST00000384622 FAM84AQ96KN4 292 aa2.14□□□□□ -2.07
RNU6-540P-201ENST00000384622 WASLO00401 505 aaPredicted RBP2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 PAPLNO95428 1278 aa2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 HOXA5P20719 270 aa2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 E2F4Q16254 413 aa2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 PRRT2Q7Z6L0 340 aaPredicted RBP2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 ZNF784Q8NCA9 323 aaPredicted RBP2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 RUBCNLQ9H714 662 aa2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 TMPRSS4Q9NRS4 437 aa2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 PRR12Q9ULL5 1215 aa2.13□□□□□ -2.07
RNU6-540P-201ENST00000384622 CARMIL2Q6F5E8 1435 aa2.12□□□□□ -2.07
RNU6-540P-201ENST00000384622 PRR19A6NJB7 356 aa2.12□□□□□ -2.07
RNU6-540P-201ENST00000384622 SPATA31C2B4DYI2 1134 aa2.12□□□□□ -2.07
RNU6-540P-201ENST00000384622 SYN1P17600 705 aa2.12□□□□□ -2.07
RNU6-540P-201ENST00000384622 ZXDCQ2QGD7 858 aaPredicted RBP2.12□□□□□ -2.07
RNU6-540P-201ENST00000384622 ZNF468Q5VIY5 522 aaPredicted RBP2.12□□□□□ -2.07
RNU6-540P-201ENST00000384622 DESI1Q6ICB0 168 aa2.12□□□□□ -2.07
RNU6-540P-201ENST00000384622 ANKLE2Q86XL3 938 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms