RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 XIRP1Q702N8 1843 aaKnown RBP11.09□□□□□ -0.63
GPNMB-202ENST00000381990 USHBP1Q8N6Y0 703 aa11.09□□□□□ -0.63
GPNMB-202ENST00000381990 API5Q9BZZ5 524 aaKnown RBP11.08□□□□□ -0.64
GPNMB-202ENST00000381990 ZBTB40Q9NUA8 1239 aa11.08□□□□□ -0.64
GPNMB-202ENST00000381990 TSPYL4Q9UJ04 414 aa11.08□□□□□ -0.64
GPNMB-202ENST00000381990 RGPD2P0DJD1 1756 aa11.08□□□□□ -0.64
GPNMB-202ENST00000381990 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
GPNMB-202ENST00000381990 ABCC4O15439 1325 aa11.08□□□□□ -0.64
GPNMB-202ENST00000381990 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
GPNMB-202ENST00000381990 RAB3GAP1Q15042 981 aa11.07□□□□□ -0.64
GPNMB-202ENST00000381990 KRT24Q2M2I5 525 aa11.07□□□□□ -0.64
GPNMB-202ENST00000381990 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
GPNMB-202ENST00000381990 IBTKQ9P2D0 1353 aaPredicted RBP11.07□□□□□ -0.64
GPNMB-202ENST00000381990 TPM2P07951 284 aa11.06□□□□□ -0.64
GPNMB-202ENST00000381990 NUCB1Q02818 461 aa11.06□□□□□ -0.64
GPNMB-202ENST00000381990 TNPO1Q92973 898 aaKnown RBP11.06□□□□□ -0.64
GPNMB-202ENST00000381990 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
GPNMB-202ENST00000381990 PLEKHG5O94827 1062 aa11.06□□□□□ -0.64
GPNMB-202ENST00000381990 IL17REQ8NFR9 667 aa11.06□□□□□ -0.64
GPNMB-202ENST00000381990 ANKRD24Q8TF21 1146 aa11.06□□□□□ -0.64
GPNMB-202ENST00000381990 LRRC59Q96AG4 307 aaKnown RBP11.06□□□□□ -0.64
GPNMB-202ENST00000381990 MIS18AQ9NYP9 233 aa11.06□□□□□ -0.64
GPNMB-202ENST00000381990 CAMTA1Q9Y6Y1 1673 aa11.06□□□□□ -0.64
GPNMB-202ENST00000381990 BMP2KLQ5H9B9 411 aa11.05□□□□□ -0.64
GPNMB-202ENST00000381990 TNS3Q68CZ2 1445 aa11.05□□□□□ -0.64
GPNMB-202ENST00000381990 HSP90AB1P08238 724 aaKnown RBP11.05□□□□□ -0.64
GPNMB-202ENST00000381990 DDX17Q92841 729 aaKnown RBP11.05□□□□□ -0.64
GPNMB-202ENST00000381990 PXDNQ92626 1479 aa11.05□□□□□ -0.64
GPNMB-202ENST00000381990 CCDC173Q0VFZ6 552 aa11.05□□□□□ -0.64
GPNMB-202ENST00000381990 TAF7Q15545 349 aaPredicted RBP11.05□□□□□ -0.64
GPNMB-202ENST00000381990 CLEC17AQ6ZS10 378 aa11.05□□□□□ -0.64
GPNMB-202ENST00000381990 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
GPNMB-202ENST00000381990 ZBTB7BO15156 539 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-202ENST00000381990 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
GPNMB-202ENST00000381990 PLEKHO1Q53GL0 409 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-202ENST00000381990 AXIN2Q9Y2T1 843 aa11.04□□□□□ -0.64
GPNMB-202ENST00000381990 SOS1Q07889 1333 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-202ENST00000381990 CEMIPQ8WUJ3 1361 aa11.04□□□□□ -0.64
GPNMB-202ENST00000381990 RGPD5Q99666 1765 aa11.04□□□□□ -0.64
GPNMB-202ENST00000381990 PTPRCP08575 1304 aa11.04□□□□□ -0.64
GPNMB-202ENST00000381990 SPATA31A3Q5VYP0 1347 aa11.04□□□□□ -0.64
GPNMB-202ENST00000381990 LMO7Q8WWI1 1683 aa11.03□□□□□ -0.64
GPNMB-202ENST00000381990 ZC3H6P61129 1189 aaKnown RBP11.03□□□□□ -0.64
GPNMB-202ENST00000381990 ANP32BQ92688 251 aaKnown RBP11.03□□□□□ -0.64
GPNMB-202ENST00000381990 BRINP3Q76B58 766 aa11.03□□□□□ -0.64
GPNMB-202ENST00000381990 CHD1LQ86WJ1 897 aa11.03□□□□□ -0.64
GPNMB-202ENST00000381990 PKNOX2Q96KN3 472 aa11.03□□□□□ -0.64
GPNMB-202ENST00000381990 ERBB3P21860 1342 aa11.03□□□□□ -0.64
GPNMB-202ENST00000381990 ERBB4Q15303 1308 aa11.03□□□□□ -0.64
GPNMB-202ENST00000381990 ZNF335Q9H4Z2 1342 aaPredicted RBP11.03□□□□□ -0.64
GPNMB-202ENST00000381990 AKAP4Q5JQC9 854 aa11.02□□□□□ -0.64
GPNMB-202ENST00000381990 INTS3Q68E01 1043 aaKnown RBP11.02□□□□□ -0.64
GPNMB-202ENST00000381990 ZNF530Q6P9A1 599 aaPredicted RBP11.02□□□□□ -0.64
GPNMB-202ENST00000381990 GCC1Q96CN9 775 aa11.02□□□□□ -0.64
GPNMB-202ENST00000381990 PPP1R9BQ96SB3 815 aa11.02□□□□□ -0.64
GPNMB-202ENST00000381990 RGS12O14924 1447 aa11.02□□□□□ -0.65
GPNMB-202ENST00000381990 ABCC6O95255 1503 aa11.02□□□□□ -0.65
GPNMB-202ENST00000381990 K7ELQ4 463 aaPredicted RBP11.02□□□□□ -0.65
GPNMB-202ENST00000381990 CRYBG1Q9Y4K1 1723 aa11.02□□□□□ -0.65
GPNMB-202ENST00000381990 COL18A1P39060 1754 aa11.02□□□□□ -0.65
GPNMB-202ENST00000381990 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
GPNMB-202ENST00000381990 TERF1P54274 439 aa11.01□□□□□ -0.65
GPNMB-202ENST00000381990 CACNA1FO60840 1977 aa11.01□□□□□ -0.65
GPNMB-202ENST00000381990 OVOS2A0A0G2JMS6 1433 aa11.01□□□□□ -0.65
GPNMB-202ENST00000381990 KLHL40Q2TBA0 621 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 STK31Q9BXU1 1019 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 SLAIN2Q9P270 581 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 HS1BP3Q53T59 392 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 C1orf141Q5JVX7 400 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 CCDC30Q5VVM6 783 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 KIF2CQ99661 725 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 PDCL3Q9H2J4 239 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 CPDO75976 1380 aa11□□□□□ -0.65
GPNMB-202ENST00000381990 FAM208AQ9UK61 1670 aaKnown RBP11□□□□□ -0.65
GPNMB-202ENST00000381990 NASPP49321 788 aaPredicted RBP10.99□□□□□ -0.65
GPNMB-202ENST00000381990 ZSCAN30Q86W11 494 aa10.99□□□□□ -0.65
GPNMB-202ENST00000381990 CABLES1Q8TDN4 633 aa10.99□□□□□ -0.65
GPNMB-202ENST00000381990 LGR6Q9HBX8 967 aa10.99□□□□□ -0.65
GPNMB-202ENST00000381990 TEFQ10587 303 aa10.99□□□□□ -0.65
GPNMB-202ENST00000381990 KDM3BQ7LBC6 1761 aa10.99□□□□□ -0.65
GPNMB-202ENST00000381990 SOS2Q07890 1332 aaPredicted RBP10.99□□□□□ -0.65
GPNMB-202ENST00000381990 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
GPNMB-202ENST00000381990 LNPKQ9C0E8 428 aa10.99□□□□□ -0.65
GPNMB-202ENST00000381990 NLRP2Q9NX02 1062 aa10.98□□□□□ -0.65
GPNMB-202ENST00000381990 PLEKHG2Q9H7P9 1386 aa10.98□□□□□ -0.65
GPNMB-202ENST00000381990 RNMTO43148 476 aaKnown RBP10.98□□□□□ -0.65
GPNMB-202ENST00000381990 MPRIPQ6WCQ1 1025 aa10.98□□□□□ -0.65
GPNMB-202ENST00000381990 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.98□□□□□ -0.65
GPNMB-202ENST00000381990 G2E3Q7L622 706 aa10.98□□□□□ -0.65
GPNMB-202ENST00000381990 RAPGEF4Q8WZA2 1011 aa10.98□□□□□ -0.65
GPNMB-202ENST00000381990 ZMYND15Q9H091 742 aa10.98□□□□□ -0.65
GPNMB-202ENST00000381990 CHMP4AQ9BY43 222 aa10.97□□□□□ -0.65
GPNMB-202ENST00000381990 C1orf115Q9H7X2 142 aa10.97□□□□□ -0.65
GPNMB-202ENST00000381990 HOXB7P09629 217 aa10.97□□□□□ -0.65
GPNMB-202ENST00000381990 MSNP26038 577 aaKnown RBP10.97□□□□□ -0.65
GPNMB-202ENST00000381990 ZNF445P59923 1031 aa10.97□□□□□ -0.65
GPNMB-202ENST00000381990 EIF4A1P60842 406 aaKnown RBP10.97□□□□□ -0.65
GPNMB-202ENST00000381990 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.65
GPNMB-202ENST00000381990 OFD1O75665 1012 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms