RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 DACH1Q9UI36 760 aa16.52■□□□□ 0.24
SNPH-201ENST00000381867 SLC4A2P04920 1241 aa16.52■□□□□ 0.23
SNPH-201ENST00000381867 TXLNAP40222 546 aa16.52■□□□□ 0.23
SNPH-201ENST00000381867 ANKRD1Q15327 319 aa16.52■□□□□ 0.23
SNPH-201ENST00000381867 PPFIBP1Q86W92 1011 aa16.52■□□□□ 0.23
SNPH-201ENST00000381867 ACEP12821 1306 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 CBFA2T2O43439 604 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 USP8P40818 1118 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 ERLIN2O94905 339 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 CEBPZQ03701 1054 aaKnown RBP16.51■□□□□ 0.23
SNPH-201ENST00000381867 ZFYVE27Q5T4F4 411 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 PDCL2Q8N4E4 241 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 C1orf115Q9H7X2 142 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
SNPH-201ENST00000381867 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
SNPH-201ENST00000381867 MPNDQ8N594 471 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 MTMR7Q9Y216 660 aa16.51■□□□□ 0.23
SNPH-201ENST00000381867 FOXO3O43524 673 aa16.5■□□□□ 0.23
SNPH-201ENST00000381867 BCAR3O75815 825 aa16.5■□□□□ 0.23
SNPH-201ENST00000381867 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
SNPH-201ENST00000381867 NOB1Q9ULX3 412 aaKnown RBP16.5■□□□□ 0.23
SNPH-201ENST00000381867 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
SNPH-201ENST00000381867 GOLGA6L7A0A1B0GV03 622 aa16.5■□□□□ 0.23
SNPH-201ENST00000381867 ATF7IPQ6VMQ6 1270 aa16.5■□□□□ 0.23
SNPH-201ENST00000381867 STARD3NLO95772 234 aa16.5■□□□□ 0.23
SNPH-201ENST00000381867 ATP2B1P20020 1258 aa16.49■□□□□ 0.23
SNPH-201ENST00000381867 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
SNPH-201ENST00000381867 PLCD4Q9BRC7 762 aa16.49■□□□□ 0.23
SNPH-201ENST00000381867 DNAJC2Q99543 621 aaKnown RBP16.48■□□□□ 0.23
SNPH-201ENST00000381867 GCC2Q8IWJ2 1684 aa16.48■□□□□ 0.23
SNPH-201ENST00000381867 SLFN5Q08AF3 891 aa16.48■□□□□ 0.23
SNPH-201ENST00000381867 LUC7LQ9NQ29 371 aaKnown RBP16.48■□□□□ 0.23
SNPH-201ENST00000381867 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
SNPH-201ENST00000381867 PPIP5K1Q6PFW1 1433 aa16.48■□□□□ 0.23
SNPH-201ENST00000381867 KDM4AO75164 1064 aa16.48■□□□□ 0.23
SNPH-201ENST00000381867 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
SNPH-201ENST00000381867 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.232e-6■■■■■ 96.1
SNPH-201ENST00000381867 TOM1O60784 492 aa16.48■□□□□ 0.23
SNPH-201ENST00000381867 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
SNPH-201ENST00000381867 ME1P48163 572 aa16.48■□□□□ 0.23
SNPH-201ENST00000381867 TXLNBQ8N3L3 684 aa16.48■□□□□ 0.23
SNPH-201ENST00000381867 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
SNPH-201ENST00000381867 CCDC181Q5TID7 509 aa16.47■□□□□ 0.23
SNPH-201ENST00000381867 MVPQ14764 893 aaKnown RBP16.47■□□□□ 0.23
SNPH-201ENST00000381867 CEP57L1Q8IYX8 460 aa16.47■□□□□ 0.23
SNPH-201ENST00000381867 NUP62CLQ9H1M0 184 aa16.47■□□□□ 0.23
SNPH-201ENST00000381867 GNL3LQ9NVN8 582 aaKnown RBP16.47■□□□□ 0.23
SNPH-201ENST00000381867 LARP1BQ659C4 914 aaKnown RBP16.46■□□□□ 0.23
SNPH-201ENST00000381867 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
SNPH-201ENST00000381867 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
SNPH-201ENST00000381867 CDK5RAP3Q96JB5 506 aa16.46■□□□□ 0.23
SNPH-201ENST00000381867 C19orf44Q9H6X5 657 aa16.46■□□□□ 0.23
SNPH-201ENST00000381867 IL16Q14005 1332 aa16.46■□□□□ 0.23
SNPH-201ENST00000381867 TMOD3Q9NYL9 352 aa16.46■□□□□ 0.23
SNPH-201ENST00000381867 YTHDC2Q9H6S0 1430 aaKnown RBP16.46■□□□□ 0.22
SNPH-201ENST00000381867 ZRSR2Q15696 482 aaKnown RBP16.45■□□□□ 0.22
SNPH-201ENST00000381867 IQCEQ6IPM2 695 aa16.45■□□□□ 0.22
SNPH-201ENST00000381867 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
SNPH-201ENST00000381867 SPATA32Q96LK8 384 aa16.45■□□□□ 0.22
SNPH-201ENST00000381867 DEF6Q9H4E7 631 aa16.45■□□□□ 0.22
SNPH-201ENST00000381867 ERICH4A6NGS2 130 aa16.45■□□□□ 0.22
SNPH-201ENST00000381867 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
SNPH-201ENST00000381867 FAM177A1Q8N128 213 aaPredicted RBP16.44■□□□□ 0.22
SNPH-201ENST00000381867 ZFYVE9O95405 1425 aa16.44■□□□□ 0.22
SNPH-201ENST00000381867 ZSCAN31Q96LW9 406 aaPredicted RBP16.44■□□□□ 0.22
SNPH-201ENST00000381867 TEX13AQ9BXU3 409 aaPredicted RBP16.44■□□□□ 0.22
SNPH-201ENST00000381867 ABCC1P33527 1531 aa16.44■□□□□ 0.22
SNPH-201ENST00000381867 MLH3Q9UHC1 1453 aa16.44■□□□□ 0.22
SNPH-201ENST00000381867 ZNF652Q9Y2D9 606 aa16.44■□□□□ 0.22
SNPH-201ENST00000381867 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
SNPH-201ENST00000381867 STIM1Q13586 685 aa16.44■□□□□ 0.22
SNPH-201ENST00000381867 KIF2AO00139 706 aaPredicted RBP16.44■□□□□ 0.22
SNPH-201ENST00000381867 STK3Q13188 491 aa16.44■□□□□ 0.22
SNPH-201ENST00000381867 RPAP2Q8IXW5 612 aaPredicted RBP16.44■□□□□ 0.22
SNPH-201ENST00000381867 CNNM1Q9NRU3 951 aa16.43■□□□□ 0.22
SNPH-201ENST00000381867 ZCCHC11Q5TAX3 1644 aaKnown RBP16.43■□□□□ 0.22
SNPH-201ENST00000381867 UBXN4Q92575 508 aa16.43■□□□□ 0.22
SNPH-201ENST00000381867 PDIA4P13667 645 aaKnown RBP16.43■□□□□ 0.22
SNPH-201ENST00000381867 SYCP1Q15431 976 aa16.43■□□□□ 0.22
SNPH-201ENST00000381867 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
SNPH-201ENST00000381867 MAGI3Q5TCQ9 1506 aa16.43■□□□□ 0.22
SNPH-201ENST00000381867 PREX2Q70Z35 1606 aa16.42■□□□□ 0.22
SNPH-201ENST00000381867 ARAP3Q8WWN8 1544 aa16.42■□□□□ 0.22
SNPH-201ENST00000381867 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
SNPH-201ENST00000381867 CCDC158Q5M9N0 1113 aa16.42■□□□□ 0.22
SNPH-201ENST00000381867 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
SNPH-201ENST00000381867 FILIP1Q7Z7B0 1213 aa16.42■□□□□ 0.22
SNPH-201ENST00000381867 SYCE3A1L190 88 aa16.41■□□□□ 0.22
SNPH-201ENST00000381867 NEFHP12036 1026 aa16.41■□□□□ 0.22
SNPH-201ENST00000381867 NKTRP30414 1462 aaKnown RBP16.41■□□□□ 0.22
SNPH-201ENST00000381867 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
SNPH-201ENST00000381867 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
SNPH-201ENST00000381867 SMTNL1A8MU46 457 aa16.41■□□□□ 0.22
SNPH-201ENST00000381867 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
SNPH-201ENST00000381867 MAP3K11Q16584 847 aa16.41■□□□□ 0.22
SNPH-201ENST00000381867 LARP1Q6PKG0 1096 aaKnown RBP16.41■□□□□ 0.22
SNPH-201ENST00000381867 TRIM22Q8IYM9 498 aa16.41■□□□□ 0.22
SNPH-201ENST00000381867 PDRG1Q9NUG6 133 aa16.4■□□□□ 0.22
SNPH-201ENST00000381867 NPATQ14207 1427 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms