RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SIK1P57059 783 aa17.69■□□□□ 0.42
RPAIN-202ENST00000381208 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-202ENST00000381208 DCAF5Q96JK2 942 aa17.69■□□□□ 0.42
RPAIN-202ENST00000381208 COL24A1Q17RW2 1714 aa17.68■□□□□ 0.42
RPAIN-202ENST00000381208 AMER1Q5JTC6 1135 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-202ENST00000381208 KIF7Q2M1P5 1343 aa17.67■□□□□ 0.42
RPAIN-202ENST00000381208 C5P01031 1676 aa17.67■□□□□ 0.42
RPAIN-202ENST00000381208 ITGB4P16144 1822 aa17.67■□□□□ 0.42
RPAIN-202ENST00000381208 SSFA2P28290 1259 aa17.66■□□□□ 0.42
RPAIN-202ENST00000381208 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
RPAIN-202ENST00000381208 TOGARAM1Q9Y4F4 1720 aa17.66■□□□□ 0.42
RPAIN-202ENST00000381208 GPR162Q16538 588 aa17.66■□□□□ 0.42
RPAIN-202ENST00000381208 TUBGCP6Q96RT7 1819 aa17.65■□□□□ 0.42
RPAIN-202ENST00000381208 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
RPAIN-202ENST00000381208 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
RPAIN-202ENST00000381208 ZNF530Q6P9A1 599 aaPredicted RBP17.65■□□□□ 0.42
RPAIN-202ENST00000381208 ASAP1Q9ULH1 1129 aa17.65■□□□□ 0.42
RPAIN-202ENST00000381208 KDRP35968 1356 aa17.64■□□□□ 0.41
RPAIN-202ENST00000381208 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
RPAIN-202ENST00000381208 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
RPAIN-202ENST00000381208 ATG3Q9NT62 314 aa17.63■□□□□ 0.41
RPAIN-202ENST00000381208 CD2APQ9Y5K6 639 aa17.63■□□□□ 0.41
RPAIN-202ENST00000381208 TAF1LQ8IZX4 1826 aa17.63■□□□□ 0.41
RPAIN-202ENST00000381208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.62■□□□□ 0.41
RPAIN-202ENST00000381208 IL13P35225 146 aa17.62■□□□□ 0.41
RPAIN-202ENST00000381208 MTHFSP49914 203 aa17.62■□□□□ 0.41
RPAIN-202ENST00000381208 CABP4P57796 275 aa17.62■□□□□ 0.41
RPAIN-202ENST00000381208 UTRNP46939 3433 aa17.62■□□□□ 0.41
RPAIN-202ENST00000381208 GRIN3BO60391 1043 aa17.61■□□□□ 0.41
RPAIN-202ENST00000381208 MSL1Q68DK7 614 aa17.61■□□□□ 0.41
RPAIN-202ENST00000381208 LINC00116Q8NCU8 138 aa17.61■□□□□ 0.41
RPAIN-202ENST00000381208 PER1O15534 1290 aaPredicted RBP17.6■□□□□ 0.41
RPAIN-202ENST00000381208 NPC1L1Q9UHC9 1359 aa17.59■□□□□ 0.41
RPAIN-202ENST00000381208 GNPATO15228 680 aa17.59■□□□□ 0.41
RPAIN-202ENST00000381208 PHF14O94880 888 aa17.59■□□□□ 0.41
RPAIN-202ENST00000381208 ITPK1Q13572 414 aa17.59■□□□□ 0.41
RPAIN-202ENST00000381208 RC3H1Q5TC82 1133 aaKnown RBP17.59■□□□□ 0.41
RPAIN-202ENST00000381208 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
RPAIN-202ENST00000381208 NLGN2Q8NFZ4 835 aa17.58■□□□□ 0.4
RPAIN-202ENST00000381208 RTCBQ9Y3I0 505 aaKnown RBP17.58■□□□□ 0.4
RPAIN-202ENST00000381208 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
RPAIN-202ENST00000381208 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
RPAIN-202ENST00000381208 CHD4Q14839 1912 aa17.57■□□□□ 0.4
RPAIN-202ENST00000381208 KDM6AO15550 1401 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-202ENST00000381208 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-202ENST00000381208 AKAP4Q5JQC9 854 aa17.56■□□□□ 0.4
RPAIN-202ENST00000381208 TRAPPC3LQ5T215 181 aa17.56■□□□□ 0.4
RPAIN-202ENST00000381208 UBR3Q6ZT12 1888 aa17.56■□□□□ 0.4
RPAIN-202ENST00000381208 CNTNAP4Q9C0A0 1308 aa17.56■□□□□ 0.4
RPAIN-202ENST00000381208 DIAPH1O60610 1272 aaKnown RBP17.55■□□□□ 0.4
RPAIN-202ENST00000381208 ZNF831Q5JPB2 1677 aa17.55■□□□□ 0.4
RPAIN-202ENST00000381208 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
RPAIN-202ENST00000381208 AMIGO3Q86WK7 504 aa17.54■□□□□ 0.4
RPAIN-202ENST00000381208 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
RPAIN-202ENST00000381208 NFATC2IPQ8NCF5 419 aa17.53■□□□□ 0.4
RPAIN-202ENST00000381208 RPS6KA4O75676 772 aa17.53■□□□□ 0.4
RPAIN-202ENST00000381208 SLC4A9Q96Q91 983 aa17.53■□□□□ 0.4
RPAIN-202ENST00000381208 PTCD1O75127 700 aaKnown RBP17.51■□□□□ 0.39
RPAIN-202ENST00000381208 SLC52A2Q9HAB3 445 aa17.51■□□□□ 0.39
RPAIN-202ENST00000381208 HMOX1P09601 288 aa17.5■□□□□ 0.39
RPAIN-202ENST00000381208 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.391e-7■□□□□ 10.3
RPAIN-202ENST00000381208 RFC4P35249 363 aa17.5■□□□□ 0.39
RPAIN-202ENST00000381208 MMP10P09238 476 aa17.49■□□□□ 0.39
RPAIN-202ENST00000381208 SMIM5Q71RC9 77 aa17.49■□□□□ 0.39
RPAIN-202ENST00000381208 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
RPAIN-202ENST00000381208 GOLGB1Q14789 3259 aaKnown RBP17.48■□□□□ 0.39
RPAIN-202ENST00000381208 RNMTO43148 476 aaKnown RBP17.48■□□□□ 0.39
RPAIN-202ENST00000381208 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
RPAIN-202ENST00000381208 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
RPAIN-202ENST00000381208 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
RPAIN-202ENST00000381208 TGFB2P61812 414 aa17.46■□□□□ 0.39
RPAIN-202ENST00000381208 POLA2Q14181 598 aa17.46■□□□□ 0.39
RPAIN-202ENST00000381208 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
RPAIN-202ENST00000381208 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
RPAIN-202ENST00000381208 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
RPAIN-202ENST00000381208 GYS1P13807 737 aa17.45■□□□□ 0.38
RPAIN-202ENST00000381208 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
RPAIN-202ENST00000381208 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
RPAIN-202ENST00000381208 MRC1P22897 1456 aa17.45■□□□□ 0.38
RPAIN-202ENST00000381208 SCN11AQ9UI33 1791 aa17.44■□□□□ 0.38
RPAIN-202ENST00000381208 COL5A3P25940 1745 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-202ENST00000381208 VSIG10Q8N0Z9 540 aa17.44■□□□□ 0.38
RPAIN-202ENST00000381208 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
RPAIN-202ENST00000381208 PARP3Q9Y6F1 533 aa17.44■□□□□ 0.38
RPAIN-202ENST00000381208 HAX1O00165 279 aa17.43■□□□□ 0.38
RPAIN-202ENST00000381208 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-202ENST00000381208 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-202ENST00000381208 GNAT3A8MTJ3 354 aa17.41■□□□□ 0.38
RPAIN-202ENST00000381208 GIGYF1O75420 1035 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-202ENST00000381208 INTS5Q6P9B9 1019 aaKnown RBP17.41■□□□□ 0.38
RPAIN-202ENST00000381208 USP42Q9H9J4 1324 aaKnown RBP17.41■□□□□ 0.38
RPAIN-202ENST00000381208 C10orf71Q711Q0 1435 aa17.41■□□□□ 0.38
RPAIN-202ENST00000381208 ZPR1O75312 459 aa17.4■□□□□ 0.38
RPAIN-202ENST00000381208 TEFQ10587 303 aa17.4■□□□□ 0.38
RPAIN-202ENST00000381208 DNAJC10Q8IXB1 793 aa17.4■□□□□ 0.38
RPAIN-202ENST00000381208 TTC5Q8N0Z6 440 aa17.4■□□□□ 0.38
RPAIN-202ENST00000381208 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
RPAIN-202ENST00000381208 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-202ENST00000381208 C1QTNF8P60827 252 aa17.4■□□□□ 0.38
RPAIN-202ENST00000381208 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms