RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 MS4A1P11836 297 aa25.14■■□□□ 1.61
CCM2-202ENST00000381112 CCDC136Q96JN2 1154 aa25.13■■□□□ 1.61
CCM2-202ENST00000381112 SLC52A2Q9HAB3 445 aa25.13■■□□□ 1.61
CCM2-202ENST00000381112 EIF4A1P60842 406 aaKnown RBP25.13■■□□□ 1.61
CCM2-202ENST00000381112 DZIP1LQ8IYY4 767 aaKnown RBP25.13■■□□□ 1.61
CCM2-202ENST00000381112 ARHGAP45Q92619 1136 aa25.13■■□□□ 1.61
CCM2-202ENST00000381112 CLUAP1Q96AJ1 413 aa25.13■■□□□ 1.61
CCM2-202ENST00000381112 COG6Q9Y2V7 657 aa25.13■■□□□ 1.61
CCM2-202ENST00000381112 NRAPQ86VF7 1730 aa25.12■■□□□ 1.61
CCM2-202ENST00000381112 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
CCM2-202ENST00000381112 MRC1P22897 1456 aa25.12■■□□□ 1.61
CCM2-202ENST00000381112 KDM3BQ7LBC6 1761 aa25.12■■□□□ 1.61
CCM2-202ENST00000381112 KCNQ3O43525 872 aa25.11■■□□□ 1.61
CCM2-202ENST00000381112 NKX1-1Q15270 411 aaPredicted RBP25.11■■□□□ 1.61
CCM2-202ENST00000381112 HSPA1LP34931 641 aa25.11■■□□□ 1.61
CCM2-202ENST00000381112 SCN11AQ9UI33 1791 aa25.1■■□□□ 1.61
CCM2-202ENST00000381112 FTSJ3Q8IY81 847 aaKnown RBP25.1■■□□□ 1.61
CCM2-202ENST00000381112 SIPA1L3O60292 1781 aaPredicted RBP25.1■■□□□ 1.61
CCM2-202ENST00000381112 SPATA31A1Q5TZJ5 1347 aa25.09■■□□□ 1.61
CCM2-202ENST00000381112 NFATC2IPQ8NCF5 419 aa25.09■■□□□ 1.61
CCM2-202ENST00000381112 NWD2Q9ULI1 1742 aa25.09■■□□□ 1.61
CCM2-202ENST00000381112 DDX54Q8TDD1 881 aaKnown RBP25.08■■□□□ 1.61
CCM2-202ENST00000381112 VIRMAQ69YN4 1812 aaKnown RBP25.07■■□□□ 1.6
CCM2-202ENST00000381112 HOXB7P09629 217 aa25.07■■□□□ 1.6
CCM2-202ENST00000381112 THRAP3Q9Y2W1 955 aaKnown RBP25.07■■□□□ 1.6
CCM2-202ENST00000381112 SHANK3Q9BYB0 1731 aa25.07■■□□□ 1.6
CCM2-202ENST00000381112 MVPQ14764 893 aaKnown RBP25.06■■□□□ 1.6
CCM2-202ENST00000381112 HEG1Q9ULI3 1381 aa25.06■■□□□ 1.6
CCM2-202ENST00000381112 SPATA31A5Q5VU36 1347 aa25.06■■□□□ 1.6
CCM2-202ENST00000381112 SPATA31A7Q8IWB4 1347 aa25.06■■□□□ 1.6
CCM2-202ENST00000381112 CCDC30Q5VVM6 783 aa25.06■■□□□ 1.6
CCM2-202ENST00000381112 LRP6O75581 1613 aa25.06■■□□□ 1.6
CCM2-202ENST00000381112 C8orf37Q96NL8 207 aa25.05■■□□□ 1.6
CCM2-202ENST00000381112 SLC4A2P04920 1241 aa25.04■■□□□ 1.6
CCM2-202ENST00000381112 CABP4P57796 275 aa25.04■■□□□ 1.6
CCM2-202ENST00000381112 ZNF790Q6PG37 636 aa25.04■■□□□ 1.6
CCM2-202ENST00000381112 UNC5CLQ8IV45 518 aa25.04■■□□□ 1.6
CCM2-202ENST00000381112 NGLY1Q96IV0 654 aa25.04■■□□□ 1.6
CCM2-202ENST00000381112 ERVV-2B6SEH9 535 aa25.04■■□□□ 1.6
CCM2-202ENST00000381112 CDCA7Q9BWT1 371 aaPredicted RBP25.04■■□□□ 1.6
CCM2-202ENST00000381112 API5Q9BZZ5 524 aaKnown RBP25.04■■□□□ 1.6
CCM2-202ENST00000381112 AAMPQ13685 434 aa25.03■■□□□ 1.6
CCM2-202ENST00000381112 FNBP4Q8N3X1 1017 aaPredicted RBP25.03■■□□□ 1.6
CCM2-202ENST00000381112 TMEM57Q8N5G2 664 aa25.02■■□□□ 1.6
CCM2-202ENST00000381112 STK31Q9BXU1 1019 aa25.02■■□□□ 1.6
CCM2-202ENST00000381112 BCL9LQ86UU0 1499 aa25.02■■□□□ 1.6
CCM2-202ENST00000381112 ABCC4O15439 1325 aa25.02■■□□□ 1.6
CCM2-202ENST00000381112 SLC39A6Q13433 755 aa25.02■■□□□ 1.6
CCM2-202ENST00000381112 HDGFL1Q5TGJ6 251 aa25.02■■□□□ 1.6
CCM2-202ENST00000381112 PTPRCP08575 1304 aa25.02■■□□□ 1.6
CCM2-202ENST00000381112 GIGYF1O75420 1035 aaPredicted RBP25.01■■□□□ 1.59
CCM2-202ENST00000381112 EXOC5O00471 708 aa25■■□□□ 1.59
CCM2-202ENST00000381112 CHMP4AQ9BY43 222 aa25■■□□□ 1.59
CCM2-202ENST00000381112 BARGINQ6ZT62 677 aa25■■□□□ 1.59
CCM2-202ENST00000381112 NECTIN2Q92692 538 aa25■■□□□ 1.59
CCM2-202ENST00000381112 RGS12O14924 1447 aa24.99■■□□□ 1.59
CCM2-202ENST00000381112 ITPRIPQ8IWB1 547 aa24.99■■□□□ 1.59
CCM2-202ENST00000381112 DDX19BQ9UMR2 479 aa24.99■■□□□ 1.59
CCM2-202ENST00000381112 TNS2Q63HR2 1409 aa24.99■■□□□ 1.59
CCM2-202ENST00000381112 VPS72Q15906 364 aa24.98■■□□□ 1.59
CCM2-202ENST00000381112 G2E3Q7L622 706 aa24.98■■□□□ 1.59
CCM2-202ENST00000381112 WNK3Q9BYP7 1800 aa24.98■■□□□ 1.59
CCM2-202ENST00000381112 CCDC9Q9Y3X0 531 aaKnown RBP24.98■■□□□ 1.59
CCM2-202ENST00000381112 EIF2S2P20042 333 aaKnown RBP24.96■■□□□ 1.59
CCM2-202ENST00000381112 TTC5Q8N0Z6 440 aa24.96■■□□□ 1.59
CCM2-202ENST00000381112 ZNF496Q96IT1 587 aaPredicted RBP24.96■■□□□ 1.59
CCM2-202ENST00000381112 PRAMEF22A3QJZ6 481 aa24.94■■□□□ 1.58
CCM2-202ENST00000381112 FLIIQ13045 1269 aa24.94■■□□□ 1.58
CCM2-202ENST00000381112 DDB1Q16531 1140 aa24.93■■□□□ 1.58
CCM2-202ENST00000381112 PELP1Q8IZL8 1130 aaKnown RBP24.93■■□□□ 1.58
CCM2-202ENST00000381112 FMNL2Q96PY5 1086 aa24.93■■□□□ 1.58
CCM2-202ENST00000381112 CHPF2Q9P2E5 772 aa24.93■■□□□ 1.58
CCM2-202ENST00000381112 USP21Q9UK80 565 aa24.93■■□□□ 1.58
CCM2-202ENST00000381112 INTS3Q68E01 1043 aaKnown RBP24.92■■□□□ 1.58
CCM2-202ENST00000381112 TOGARAM1Q9Y4F4 1720 aa24.92■■□□□ 1.58
CCM2-202ENST00000381112 KDM2BQ8NHM5 1336 aa24.92■■□□□ 1.58
CCM2-202ENST00000381112 MEX3CQ5U5Q3 659 aaKnown RBP24.92■■□□□ 1.58
CCM2-202ENST00000381112 ZBTB40Q9NUA8 1239 aa24.92■■□□□ 1.58
CCM2-202ENST00000381112 TMOD3Q9NYL9 352 aa24.91■■□□□ 1.58
CCM2-202ENST00000381112 SNRPA1P09661 255 aaKnown RBP24.9■■□□□ 1.58
CCM2-202ENST00000381112 DBF4Q9UBU7 674 aaPredicted RBP24.9■■□□□ 1.58
CCM2-202ENST00000381112 PCDHB15Q9Y5E8 787 aa24.9■■□□□ 1.58
CCM2-202ENST00000381112 ZBTB7BO15156 539 aaPredicted RBP24.89■■□□□ 1.58
CCM2-202ENST00000381112 FKBP5Q13451 457 aaPredicted RBP24.88■■□□□ 1.57
CCM2-202ENST00000381112 CENPQQ7L2Z9 268 aaPredicted RBP24.88■■□□□ 1.57
CCM2-202ENST00000381112 PIGBQ92521 554 aa24.88■■□□□ 1.57
CCM2-202ENST00000381112 CHMP4BQ9H444 224 aaKnown RBP24.88■■□□□ 1.57
CCM2-202ENST00000381112 PHAXQ9H814 394 aaKnown RBP24.88■■□□□ 1.57
CCM2-202ENST00000381112 FAM98CQ17RN3 349 aaKnown RBP24.87■■□□□ 1.57
CCM2-202ENST00000381112 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.87■■□□□ 1.57
CCM2-202ENST00000381112 PAPPAQ13219 1627 aa24.87■■□□□ 1.57
CCM2-202ENST00000381112 GLI3P10071 1580 aa24.87■■□□□ 1.57
CCM2-202ENST00000381112 KCPQ6ZWJ8 1503 aa24.86■■□□□ 1.57
CCM2-202ENST00000381112 F6X3S4 739 aa24.86■■□□□ 1.57
CCM2-202ENST00000381112 MARCH10Q8NA82 808 aaPredicted RBP24.86■■□□□ 1.57
CCM2-202ENST00000381112 IGHDP01880 384 aa24.85■■□□□ 1.57
CCM2-202ENST00000381112 AFF2P51816 1311 aa24.85■■□□□ 1.57
CCM2-202ENST00000381112 BCL9O00512 1426 aa24.85■■□□□ 1.57
CCM2-202ENST00000381112 ANXA1P04083 346 aa24.85■■□□□ 1.57
CCM2-202ENST00000381112 PDIA6Q15084 440 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms