RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 FBXO31Q5XUX0 539 aaPredicted RBP16.28■□□□□ 0.2
EIF3CL-201ENST00000380876 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
EIF3CL-201ENST00000380876 CHMLP26374 656 aa16.28■□□□□ 0.2
EIF3CL-201ENST00000380876 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
EIF3CL-201ENST00000380876 RIOK3O14730 519 aaKnown RBP16.27■□□□□ 0.2
EIF3CL-201ENST00000380876 DMTNQ08495 405 aa16.27■□□□□ 0.2
EIF3CL-201ENST00000380876 CAMK4Q16566 473 aa16.27■□□□□ 0.2
EIF3CL-201ENST00000380876 YTHDC2Q9H6S0 1430 aaKnown RBP16.27■□□□□ 0.2
EIF3CL-201ENST00000380876 MX1P20591 662 aa16.27■□□□□ 0.2
EIF3CL-201ENST00000380876 NAA30Q147X3 362 aaPredicted RBP16.27■□□□□ 0.2
EIF3CL-201ENST00000380876 PUS7Q96PZ0 661 aaKnown RBP16.27■□□□□ 0.19
EIF3CL-201ENST00000380876 INO80Q9ULG1 1556 aaPredicted RBP16.27■□□□□ 0.19
EIF3CL-201ENST00000380876 ARHGAP31Q2M1Z3 1444 aa16.26■□□□□ 0.19
EIF3CL-201ENST00000380876 HMMRO75330 724 aa16.26■□□□□ 0.19
EIF3CL-201ENST00000380876 CUL4AQ13619 759 aa16.26■□□□□ 0.19
EIF3CL-201ENST00000380876 FAM173BQ6P4H8 233 aa16.26■□□□□ 0.19
EIF3CL-201ENST00000380876 PDCL2Q8N4E4 241 aa16.26■□□□□ 0.19
EIF3CL-201ENST00000380876 PHF14O94880 888 aa16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 KCNF1Q9H3M0 494 aa16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 PPLO60437 1756 aa16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 ARHGEF40Q8TER5 1519 aa16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 DNM1Q05193 864 aaKnown RBP16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 LMOD3Q0VAK6 560 aa16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
EIF3CL-201ENST00000380876 ARHGEF28Q8N1W1 1705 aaKnown RBP16.24■□□□□ 0.19
EIF3CL-201ENST00000380876 WDR33Q9C0J8 1336 aaKnown RBP16.24■□□□□ 0.19
EIF3CL-201ENST00000380876 KDM4AO75164 1064 aa16.24■□□□□ 0.19
EIF3CL-201ENST00000380876 FERMT3Q86UX7 667 aa16.24■□□□□ 0.19
EIF3CL-201ENST00000380876 VPS37CA5D8V6 355 aaPredicted RBP16.24■□□□□ 0.19
EIF3CL-201ENST00000380876 COG3Q96JB2 828 aa16.24■□□□□ 0.19
EIF3CL-201ENST00000380876 LARGE1O95461 756 aa16.23■□□□□ 0.19
EIF3CL-201ENST00000380876 SYT1P21579 422 aa16.23■□□□□ 0.19
EIF3CL-201ENST00000380876 FKBP5Q13451 457 aaPredicted RBP16.23■□□□□ 0.19
EIF3CL-201ENST00000380876 CCDC83Q8IWF9 413 aa16.23■□□□□ 0.19
EIF3CL-201ENST00000380876 RASEFQ8IZ41 740 aa16.23■□□□□ 0.19
EIF3CL-201ENST00000380876 ABCC3O15438 1527 aa16.23■□□□□ 0.19
EIF3CL-201ENST00000380876 RGS12O14924 1447 aa16.23■□□□□ 0.19
EIF3CL-201ENST00000380876 PTGS1P23219 599 aa16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 LRMPQ12912 555 aa16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 AK2P54819 239 aa16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 HMGN5P82970 282 aaKnown RBP16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 DRC7Q8IY82 874 aa16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 CKAP2LQ8IYA6 745 aa16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 C16orf45Q96MC5 204 aaPredicted RBP16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 GNAI2P04899 355 aa16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 TSPYL4Q9UJ04 414 aa16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 LRRFIP2Q9Y608 721 aaKnown RBP16.22■□□□□ 0.19
EIF3CL-201ENST00000380876 MCM2P49736 904 aa16.21■□□□□ 0.19
EIF3CL-201ENST00000380876 HSP90AB2PQ58FF8 381 aa16.21■□□□□ 0.19
EIF3CL-201ENST00000380876 CWC27Q6UX04 472 aaKnown RBP16.21■□□□□ 0.19
EIF3CL-201ENST00000380876 STX6O43752 255 aa16.21■□□□□ 0.19
EIF3CL-201ENST00000380876 TXNDC2Q86VQ3 553 aa16.21■□□□□ 0.19
EIF3CL-201ENST00000380876 NRBP1Q9UHY1 535 aa16.21■□□□□ 0.19
EIF3CL-201ENST00000380876 NECAB1Q8N987 351 aa16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 ZNF592Q92610 1267 aa16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 SMC3Q9UQE7 1217 aa16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 RPAP1Q9BWH6 1393 aaPredicted RBP16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 ZSCAN22P10073 491 aaPredicted RBP16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 LUZP1Q86V48 1076 aa16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 MAP2P11137 1827 aaKnown RBP16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 CHL1O00533 1208 aa16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 INTS4Q96HW7 963 aaKnown RBP16.2■□□□□ 0.18
EIF3CL-201ENST00000380876 TCEANC2Q96MN5 208 aa16.19■□□□□ 0.18
EIF3CL-201ENST00000380876 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
EIF3CL-201ENST00000380876 RUFY3Q7L099 469 aa16.19■□□□□ 0.18
EIF3CL-201ENST00000380876 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
EIF3CL-201ENST00000380876 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.19■□□□□ 0.18
EIF3CL-201ENST00000380876 V9GYY5 206 aaPredicted RBP16.19■□□□□ 0.18
EIF3CL-201ENST00000380876 KIAA1524Q8TCG1 905 aa16.18■□□□□ 0.18
EIF3CL-201ENST00000380876 CASTP20810 708 aaKnown RBP16.18■□□□□ 0.18
EIF3CL-201ENST00000380876 ZFYVE9O95405 1425 aa16.18■□□□□ 0.18
EIF3CL-201ENST00000380876 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
EIF3CL-201ENST00000380876 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
EIF3CL-201ENST00000380876 ZBTB22O15209 634 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 UBE2HP62256 183 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 SNX14Q9Y5W7 946 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 F13A1P00488 732 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 GJB2P29033 226 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 COL9A3Q14050 684 aaPredicted RBP16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 UVSSAQ2YD98 709 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 ZNF771Q7L3S4 317 aaPredicted RBP16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 OSBPL3Q9H4L5 887 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 NEURL4Q96JN8 1562 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 PTPRMP28827 1452 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 SURF6O75683 361 aaKnown RBP16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 CCDC186Q7Z3E2 898 aa16.17■□□□□ 0.18
EIF3CL-201ENST00000380876 NPHP1O15259 732 aa16.16■□□□□ 0.18
EIF3CL-201ENST00000380876 TFIP11Q9UBB9 837 aaKnown RBP16.16■□□□□ 0.18
EIF3CL-201ENST00000380876 NEXMIFQ5QGS0 1516 aa16.15■□□□□ 0.18
EIF3CL-201ENST00000380876 SPTLC3Q9NUV7 552 aa16.15■□□□□ 0.18
EIF3CL-201ENST00000380876 PTPRCP08575 1304 aa16.15■□□□□ 0.18
EIF3CL-201ENST00000380876 ADCK5Q3MIX3 580 aa16.15■□□□□ 0.18
EIF3CL-201ENST00000380876 CGNQ9P2M7 1197 aaKnown RBP16.15■□□□□ 0.18
EIF3CL-201ENST00000380876 LIG1P18858 919 aa16.14■□□□□ 0.17
EIF3CL-201ENST00000380876 HSPA4P34932 840 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms