RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 NBPF4Q96M43 638 aa13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 SRCIN1Q9C0H9 1055 aa13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 ABCC4O15439 1325 aa13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 PPLO60437 1756 aa13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 GNAI3P08754 354 aa13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 PPP1R42Q7Z4L9 355 aa13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 PA2G4Q9UQ80 394 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 SPG7Q9UQ90 795 aa13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 ERC2O15083 957 aa13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 MX1P20591 662 aa13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 FGD1P98174 961 aa13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 ARID3AQ99856 593 aa13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 PDE1AP54750 535 aa13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 PNPLA6Q8IY17 1366 aa13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
DNMT3A-203ENST00000380746 CWF19L2Q2TBE0 894 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-203ENST00000380746 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-203ENST00000380746 NBPF7P0C2Y1 421 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-203ENST00000380746 CPA1P15085 419 aa13.36□□□□□ -0.27
DNMT3A-203ENST00000380746 FOSBP53539 338 aa13.36□□□□□ -0.27
DNMT3A-203ENST00000380746 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
DNMT3A-203ENST00000380746 CCDC85AQ96PX6 553 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-203ENST00000380746 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
DNMT3A-203ENST00000380746 RABEP1Q15276 862 aa13.35□□□□□ -0.27
DNMT3A-203ENST00000380746 CFAP74Q9C0B2 1584 aa13.35□□□□□ -0.27
DNMT3A-203ENST00000380746 KIAA1210Q9ULL0 1709 aa13.35□□□□□ -0.27
DNMT3A-203ENST00000380746 ZC3H13Q5T200 1668 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-203ENST00000380746 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
DNMT3A-203ENST00000380746 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-203ENST00000380746 IFIT2P09913 472 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-203ENST00000380746 KLHDC4Q8TBB5 520 aa13.34□□□□□ -0.27
DNMT3A-203ENST00000380746 DIAPH3Q9NSV4 1193 aa13.34□□□□□ -0.27
DNMT3A-203ENST00000380746 FLT4P35916 1363 aa13.34□□□□□ -0.27
DNMT3A-203ENST00000380746 UNC5CLQ8IV45 518 aa13.34□□□□□ -0.27
DNMT3A-203ENST00000380746 RAPGEF4Q8WZA2 1011 aa13.34□□□□□ -0.27
DNMT3A-203ENST00000380746 PTMAP06454 111 aaKnown RBP13.33□□□□□ -0.27
DNMT3A-203ENST00000380746 TCEANC2Q96MN5 208 aa13.33□□□□□ -0.27
DNMT3A-203ENST00000380746 RBM10P98175 930 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-203ENST00000380746 PTPRCP08575 1304 aa13.33□□□□□ -0.28
DNMT3A-203ENST00000380746 MYO3AQ8NEV4 1616 aa13.33□□□□□ -0.28
DNMT3A-203ENST00000380746 ARHGEF28Q8N1W1 1705 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-203ENST00000380746 USP26Q9BXU7 913 aa13.33□□□□□ -0.28
DNMT3A-203ENST00000380746 GRPEL1Q9HAV7 217 aa13.33□□□□□ -0.28
DNMT3A-203ENST00000380746 RTL1A6NKG5 1358 aa13.33□□□□□ -0.28
DNMT3A-203ENST00000380746 RBM25P49756 843 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-203ENST00000380746 PLEKHO1Q53GL0 409 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-203ENST00000380746 CLTCQ00610 1675 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-203ENST00000380746 MAP3K2Q9Y2U5 619 aa13.32□□□□□ -0.28
DNMT3A-203ENST00000380746 SHPRHQ149N8 1683 aa13.32□□□□□ -0.28
DNMT3A-203ENST00000380746 ATP5J2-PTCD1G3V325 749 aa13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 PTCD1O75127 700 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 PALD1Q9ULE6 856 aa13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 NDUFB9Q9Y6M9 179 aa13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 ANKRD24Q8TF21 1146 aa13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 AACSQ86V21 672 aa13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 DNAAF4Q8WXU2 420 aa13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 STRN4Q9NRL3 753 aa13.31□□□□□ -0.28
DNMT3A-203ENST00000380746 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 USP6P35125 1406 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 COL3A1P02461 1466 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 GCP02774 474 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 CLASRPQ8N2M8 674 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 PIK3R4Q99570 1358 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 ATP7BP35670 1465 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 NLRP1Q9C000 1473 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 VPS37CA5D8V6 355 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 STK3Q13188 491 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 KIF2CQ99661 725 aa13.3□□□□□ -0.28
DNMT3A-203ENST00000380746 TMEM131LA2VDJ0 1609 aa13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 KAT6BQ8WYB5 2073 aa13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 G3BP1Q13283 466 aaKnown RBP eCLIP13.29□□□□□ -0.284e-6■□□□□ 9.2
DNMT3A-203ENST00000380746 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 ATF3P18847 181 aa13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 HSPA2P54652 639 aa13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 KRT28Q7Z3Y7 464 aa13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 GAS2L3Q86XJ1 694 aa13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 DNAJC2Q99543 621 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-203ENST00000380746 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 RHPN1Q8TCX5 695 aa13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 PREX1Q8TCU6 1659 aa13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 KDM4AO75164 1064 aa13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 MAP2P11137 1827 aaKnown RBP13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 AATKQ6ZMQ8 1374 aa13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-203ENST00000380746 FIBPO43427 364 aa13.27□□□□□ -0.28
DNMT3A-203ENST00000380746 MRE11P49959 708 aa13.27□□□□□ -0.28
DNMT3A-203ENST00000380746 NFATC2IPQ8NCF5 419 aa13.27□□□□□ -0.28
DNMT3A-203ENST00000380746 TMX3Q96JJ7 454 aa13.27□□□□□ -0.28
DNMT3A-203ENST00000380746 SBNO1A3KN83 1393 aa13.27□□□□□ -0.28
DNMT3A-203ENST00000380746 SYCE3A1L190 88 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms