RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PLEKHO1Q53GL0 409 aaPredicted RBP23.06■■□□□ 1.28
SMN2-201ENST00000380741 AEBP1Q8IUX7 1158 aa23.06■■□□□ 1.28
SMN2-201ENST00000380741 KDRP35968 1356 aa23.05■■□□□ 1.28
SMN2-201ENST00000380741 ERVV-2B6SEH9 535 aa23.05■■□□□ 1.28
SMN2-201ENST00000380741 HSP90AB1P08238 724 aaKnown RBP23.05■■□□□ 1.28
SMN2-201ENST00000380741 DCAF5Q96JK2 942 aa23.05■■□□□ 1.28
SMN2-201ENST00000380741 CD2APQ9Y5K6 639 aa23.05■■□□□ 1.28
SMN2-201ENST00000380741 KDM6AO15550 1401 aaPredicted RBP23.05■■□□□ 1.28
SMN2-201ENST00000380741 ZNF831Q5JPB2 1677 aa23.04■■□□□ 1.28
SMN2-201ENST00000380741 GNPATO15228 680 aa23.04■■□□□ 1.28
SMN2-201ENST00000380741 ZNF530Q6P9A1 599 aaPredicted RBP23.04■■□□□ 1.28
SMN2-201ENST00000380741 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
SMN2-201ENST00000380741 COL5A3P25940 1745 aaPredicted RBP23.03■■□□□ 1.28
SMN2-201ENST00000380741 AMOTQ4VCS5 1084 aa23.03■■□□□ 1.28
SMN2-201ENST00000380741 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
SMN2-201ENST00000380741 GRIN3BO60391 1043 aa23.01■■□□□ 1.27
SMN2-201ENST00000380741 SLC4A9Q96Q91 983 aa23.01■■□□□ 1.27
SMN2-201ENST00000380741 IL13P35225 146 aa23■■□□□ 1.27
SMN2-201ENST00000380741 SULT6B1Q6IMI4 303 aa23■■□□□ 1.27
SMN2-201ENST00000380741 RBM42Q9BTD8 480 aaKnown RBP22.99■■□□□ 1.27
SMN2-201ENST00000380741 MTHFSP49914 203 aa22.98■■□□□ 1.27
SMN2-201ENST00000380741 CABP4P57796 275 aa22.98■■□□□ 1.27
SMN2-201ENST00000380741 C1orf141Q5JVX7 400 aa22.98■■□□□ 1.27
SMN2-201ENST00000380741 SCN11AQ9UI33 1791 aa22.97■■□□□ 1.27
SMN2-201ENST00000380741 MYH14Q7Z406 1995 aaKnown RBP22.96■■□□□ 1.27
SMN2-201ENST00000380741 RTCBQ9Y3I0 505 aaKnown RBP22.95■■□□□ 1.26
SMN2-201ENST00000380741 CNTNAP4Q9C0A0 1308 aa22.93■■□□□ 1.26
SMN2-201ENST00000380741 PER1O15534 1290 aaPredicted RBP22.93■■□□□ 1.26
SMN2-201ENST00000380741 TRAPPC3LQ5T215 181 aa22.93■■□□□ 1.26
SMN2-201ENST00000380741 RC3H1Q5TC82 1133 aaKnown RBP22.93■■□□□ 1.26
SMN2-201ENST00000380741 NFATC2IPQ8NCF5 419 aa22.93■■□□□ 1.26
SMN2-201ENST00000380741 VIRMAQ69YN4 1812 aaKnown RBP22.93■■□□□ 1.26
SMN2-201ENST00000380741 C4AP0C0L4 1744 aa22.93■■□□□ 1.26
SMN2-201ENST00000380741 TJP1Q07157 1748 aa22.92■■□□□ 1.26
SMN2-201ENST00000380741 MMP10P09238 476 aa22.92■■□□□ 1.26
SMN2-201ENST00000380741 KIF13BQ9NQT8 1826 aa22.92■■□□□ 1.26
SMN2-201ENST00000380741 CICQ96RK0 1608 aaPredicted RBP22.91■■□□□ 1.26
SMN2-201ENST00000380741 PTCD1O75127 700 aaKnown RBP22.91■■□□□ 1.26
SMN2-201ENST00000380741 ADRA2BP18089 450 aa22.91■■□□□ 1.26
SMN2-201ENST00000380741 C1QTNF8P60827 252 aa22.91■■□□□ 1.26
SMN2-201ENST00000380741 WWC3Q9ULE0 1092 aa22.91■■□□□ 1.26
SMN2-201ENST00000380741 CC2D1BQ5T0F9 858 aaKnown RBP22.9■■□□□ 1.26
SMN2-201ENST00000380741 ARHGEF1Q92888 912 aaKnown RBP22.9■■□□□ 1.26
SMN2-201ENST00000380741 KIAA1551Q9HCM1 1747 aa22.89■■□□□ 1.26
SMN2-201ENST00000380741 RPS6KA4O75676 772 aa22.89■■□□□ 1.25
SMN2-201ENST00000380741 AKAP4Q5JQC9 854 aa22.89■■□□□ 1.25
SMN2-201ENST00000380741 GIGYF1O75420 1035 aaPredicted RBP22.88■■□□□ 1.25
SMN2-201ENST00000380741 HMOX1P09601 288 aa22.88■■□□□ 1.25
SMN2-201ENST00000380741 N4BP2Q86UW6 1770 aaPredicted RBP22.87■■□□□ 1.25
SMN2-201ENST00000380741 RFC4P35249 363 aa22.87■■□□□ 1.25
SMN2-201ENST00000380741 NLGN1Q8N2Q7 840 aa22.87■■□□□ 1.25
SMN2-201ENST00000380741 MRC1P22897 1456 aa22.86■■□□□ 1.25
SMN2-201ENST00000380741 ATP10DQ9P241 1426 aa22.86■■□□□ 1.25
SMN2-201ENST00000380741 GYS1P13807 737 aa22.86■■□□□ 1.25
SMN2-201ENST00000380741 PXDNLA1KZ92 1463 aa22.85■■□□□ 1.25
SMN2-201ENST00000380741 DIAPH1O60610 1272 aaKnown RBP22.85■■□□□ 1.25
SMN2-201ENST00000380741 CRKLP46109 303 aaKnown RBP22.85■■□□□ 1.25
SMN2-201ENST00000380741 SLC52A2Q9HAB3 445 aa22.85■■□□□ 1.25
SMN2-201ENST00000380741 LGR6Q9HBX8 967 aa22.85■■□□□ 1.25
SMN2-201ENST00000380741 ADAMTS7Q9UKP4 1686 aa22.84■■□□□ 1.25
SMN2-201ENST00000380741 C10orf71Q711Q0 1435 aa22.84■■□□□ 1.25
SMN2-201ENST00000380741 ADCY9O60503 1353 aa22.83■■□□□ 1.25
SMN2-201ENST00000380741 COL3A1P02461 1466 aaPredicted RBP22.83■■□□□ 1.25
SMN2-201ENST00000380741 NPC1L1Q9UHC9 1359 aa22.82■■□□□ 1.24
SMN2-201ENST00000380741 SENP3-EIF4A1A0A087X0R7 540 aa22.82■■□□□ 1.24
SMN2-201ENST00000380741 RNMTO43148 476 aaKnown RBP22.82■■□□□ 1.24
SMN2-201ENST00000380741 MTHFSDQ2M296 383 aaKnown RBP22.82■■□□□ 1.24
SMN2-201ENST00000380741 CNGB1Q14028 1251 aaPredicted RBP22.81■■□□□ 1.24
SMN2-201ENST00000380741 BRCA1P38398 1863 aaKnown RBP22.8■■□□□ 1.24
SMN2-201ENST00000380741 TGFB2P61812 414 aa22.8■■□□□ 1.24
SMN2-201ENST00000380741 CCDC87Q9NVE4 849 aa22.8■■□□□ 1.24
SMN2-201ENST00000380741 SRP68Q9UHB9 627 aaKnown RBP22.8■■□□□ 1.24
SMN2-201ENST00000380741 USP42Q9H9J4 1324 aaKnown RBP22.8■■□□□ 1.24
SMN2-201ENST00000380741 KCPQ6ZWJ8 1503 aa22.79■■□□□ 1.24
SMN2-201ENST00000380741 SLC39A6Q13433 755 aa22.79■■□□□ 1.24
SMN2-201ENST00000380741 INTS5Q6P9B9 1019 aaKnown RBP22.79■■□□□ 1.24
SMN2-201ENST00000380741 DNAJC10Q8IXB1 793 aa22.79■■□□□ 1.24
SMN2-201ENST00000380741 PARP3Q9Y6F1 533 aa22.79■■□□□ 1.24
SMN2-201ENST00000380741 A0A0G2JLW4 131 aa22.78■■□□□ 1.24
SMN2-201ENST00000380741 UBR2Q8IWV8 1755 aa22.77■■□□□ 1.24
SMN2-201ENST00000380741 FKBP8Q14318 412 aa22.77■■□□□ 1.24
SMN2-201ENST00000380741 GPBP1L1Q9HC44 474 aaPredicted RBP22.76■■□□□ 1.23
SMN2-201ENST00000380741 CEP350Q5VT06 3117 aa22.75■■□□□ 1.23
SMN2-201ENST00000380741 DPEP1P16444 411 aa22.75■■□□□ 1.23
SMN2-201ENST00000380741 ZNF526Q8TF50 670 aaPredicted RBP22.75■■□□□ 1.23
SMN2-201ENST00000380741 BCS1LQ9Y276 419 aa22.75■■□□□ 1.23
SMN2-201ENST00000380741 U2SURPO15042 1029 aaKnown RBP22.74■■□□□ 1.23
SMN2-201ENST00000380741 CYP19A1P11511 503 aaPredicted RBP22.74■■□□□ 1.23
SMN2-201ENST00000380741 DDR1Q08345 913 aa22.74■■□□□ 1.23
SMN2-201ENST00000380741 SOS1Q07889 1333 aaPredicted RBP22.74■■□□□ 1.23
SMN2-201ENST00000380741 ARFGEF1Q9Y6D6 1849 aa22.72■■□□□ 1.23
SMN2-201ENST00000380741 SIPA1L3O60292 1781 aaPredicted RBP22.71■■□□□ 1.23
SMN2-201ENST00000380741 KCNA3P22001 575 aa22.71■■□□□ 1.23
SMN2-201ENST00000380741 USPL1Q5W0Q7 1092 aa22.71■■□□□ 1.23
SMN2-201ENST00000380741 ZBTB1Q9Y2K1 713 aa22.71■■□□□ 1.23
SMN2-201ENST00000380741 ZPR1O75312 459 aa22.7■■□□□ 1.22
SMN2-201ENST00000380741 VSIG10Q8N0Z9 540 aa22.7■■□□□ 1.22
SMN2-201ENST00000380741 COL15A1P39059 1388 aa22.7■■□□□ 1.22
SMN2-201ENST00000380741 AFDNP55196 1824 aaKnown RBP22.69■■□□□ 1.22
SMN2-201ENST00000380741 POLRMTO00411 1230 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms