RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ATG3Q9NT62 314 aa31.74■■■□□ 2.67
U2AF1-202ENST00000380276 PANK3Q9H999 370 aa31.73■■■□□ 2.67
U2AF1-202ENST00000380276 ATP10DQ9P241 1426 aa31.73■■■□□ 2.67
U2AF1-202ENST00000380276 HSPA5P11021 654 aaKnown RBP31.72■■■□□ 2.67
U2AF1-202ENST00000380276 RBM42Q9BTD8 480 aaKnown RBP31.72■■■□□ 2.67
U2AF1-202ENST00000380276 HSP90AB1P08238 724 aaKnown RBP31.68■■■□□ 2.66
U2AF1-202ENST00000380276 PLEKHO1Q53GL0 409 aaPredicted RBP31.68■■■□□ 2.66
U2AF1-202ENST00000380276 ZNF526Q8TF50 670 aaPredicted RBP31.68■■■□□ 2.66
U2AF1-202ENST00000380276 ZNF530Q6P9A1 599 aaPredicted RBP31.67■■■□□ 2.66
U2AF1-202ENST00000380276 MORC1Q86VD1 984 aa31.66■■■□□ 2.66
U2AF1-202ENST00000380276 GPBP1L1Q9HC44 474 aaPredicted RBP31.66■■■□□ 2.66
U2AF1-202ENST00000380276 RTCBQ9Y3I0 505 aaKnown RBP31.66■■■□□ 2.66
U2AF1-202ENST00000380276 ERVV-2B6SEH9 535 aa31.65■■■□□ 2.66
U2AF1-202ENST00000380276 MMP10P09238 476 aa31.65■■■□□ 2.66
U2AF1-202ENST00000380276 DCAF5Q96JK2 942 aa31.65■■■□□ 2.66
U2AF1-202ENST00000380276 TRAPPC3LQ5T215 181 aa31.64■■■□□ 2.66
U2AF1-202ENST00000380276 PLEKHG2Q9H7P9 1386 aa31.64■■■□□ 2.66
U2AF1-202ENST00000380276 CABP4P57796 275 aa31.63■■■□□ 2.65
U2AF1-202ENST00000380276 KDRP35968 1356 aa31.63■■■□□ 2.65
U2AF1-202ENST00000380276 AMOTQ4VCS5 1084 aa31.61■■■□□ 2.65
U2AF1-202ENST00000380276 C1orf141Q5JVX7 400 aa31.61■■■□□ 2.65
U2AF1-202ENST00000380276 AEBP1Q8IUX7 1158 aa31.59■■■□□ 2.65
U2AF1-202ENST00000380276 SLC4A9Q96Q91 983 aa31.59■■■□□ 2.65
U2AF1-202ENST00000380276 KDM6AO15550 1401 aaPredicted RBP31.58■■■□□ 2.65
U2AF1-202ENST00000380276 MTHFSP49914 203 aa31.58■■■□□ 2.65
U2AF1-202ENST00000380276 CCER1Q8TC90 406 aaPredicted RBP31.58■■■□□ 2.65
U2AF1-202ENST00000380276 CICQ96RK0 1608 aaPredicted RBP31.57■■■□□ 2.64
U2AF1-202ENST00000380276 ADCY9O60503 1353 aa31.56■■■□□ 2.64
U2AF1-202ENST00000380276 RFC4P35249 363 aa31.56■■■□□ 2.64
U2AF1-202ENST00000380276 NLGN1Q8N2Q7 840 aa31.56■■■□□ 2.64
U2AF1-202ENST00000380276 ARHGEF1Q92888 912 aaKnown RBP31.56■■■□□ 2.64
U2AF1-202ENST00000380276 KNSTRNQ9Y448 316 aa31.56■■■□□ 2.64
U2AF1-202ENST00000380276 PTCD1O75127 700 aaKnown RBP31.55■■■□□ 2.64
U2AF1-202ENST00000380276 SULT6B1Q6IMI4 303 aa31.55■■■□□ 2.64
U2AF1-202ENST00000380276 COL5A3P25940 1745 aaPredicted RBP31.55■■■□□ 2.64
U2AF1-202ENST00000380276 ZNF831Q5JPB2 1677 aa31.54■■■□□ 2.64
U2AF1-202ENST00000380276 CNTNAP4Q9C0A0 1308 aa31.54■■■□□ 2.64
U2AF1-202ENST00000380276 RC3H1Q5TC82 1133 aaKnown RBP31.54■■■□□ 2.64
U2AF1-202ENST00000380276 ADRA2BP18089 450 aa31.53■■■□□ 2.64
U2AF1-202ENST00000380276 PXDNLA1KZ92 1463 aa31.52■■■□□ 2.64
U2AF1-202ENST00000380276 RPS6KA4O75676 772 aa31.52■■■□□ 2.64
U2AF1-202ENST00000380276 CCDC87Q9NVE4 849 aa31.52■■■□□ 2.64
U2AF1-202ENST00000380276 BCS1LQ9Y276 419 aa31.52■■■□□ 2.64
U2AF1-202ENST00000380276 N4BP2Q86UW6 1770 aaPredicted RBP31.52■■■□□ 2.64
U2AF1-202ENST00000380276 PARP3Q9Y6F1 533 aa31.51■■■□□ 2.63
U2AF1-202ENST00000380276 A0A0G2JLW4 131 aa31.5■■■□□ 2.63
U2AF1-202ENST00000380276 NFATC2IPQ8NCF5 419 aa31.5■■■□□ 2.63
U2AF1-202ENST00000380276 GYS1P13807 737 aa31.49■■■□□ 2.63
U2AF1-202ENST00000380276 TGFB2P61812 414 aa31.49■■■□□ 2.63
U2AF1-202ENST00000380276 KIF13BQ9NQT8 1826 aa31.49■■■□□ 2.63
U2AF1-202ENST00000380276 C4AP0C0L4 1744 aa31.48■■■□□ 2.63
U2AF1-202ENST00000380276 C10orf71Q711Q0 1435 aa31.48■■■□□ 2.63
U2AF1-202ENST00000380276 CRKLP46109 303 aaKnown RBP31.46■■■□□ 2.63
U2AF1-202ENST00000380276 KIAA1551Q9HCM1 1747 aa31.46■■■□□ 2.63
U2AF1-202ENST00000380276 IL13P35225 146 aa31.45■■■□□ 2.63
U2AF1-202ENST00000380276 DPEP1P16444 411 aa31.44■■■□□ 2.62
U2AF1-202ENST00000380276 ARHGAP27Q6ZUM4 889 aa31.44■■■□□ 2.62
U2AF1-202ENST00000380276 MYH14Q7Z406 1995 aaKnown RBP31.43■■■□□ 2.62
U2AF1-202ENST00000380276 FCHSD2O94868 740 aa31.43■■■□□ 2.62
U2AF1-202ENST00000380276 SRP68Q9UHB9 627 aaKnown RBP31.43■■■□□ 2.62
U2AF1-202ENST00000380276 TJP1Q07157 1748 aa31.41■■■□□ 2.62
U2AF1-202ENST00000380276 SCN11AQ9UI33 1791 aa31.4■■■□□ 2.62
U2AF1-202ENST00000380276 AKAP4Q5JQC9 854 aa31.4■■■□□ 2.62
U2AF1-202ENST00000380276 HSPA6P17066 643 aa31.39■■■□□ 2.62
U2AF1-202ENST00000380276 HMOX1P09601 288 aa31.38■■■□□ 2.61
U2AF1-202ENST00000380276 FKBP8Q14318 412 aa31.37■■■□□ 2.61
U2AF1-202ENST00000380276 USP42Q9H9J4 1324 aaKnown RBP31.37■■■□□ 2.61
U2AF1-202ENST00000380276 AMER1Q5JTC6 1135 aaPredicted RBP31.36■■■□□ 2.61
U2AF1-202ENST00000380276 KIF3CO14782 793 aa31.35■■■□□ 2.61
U2AF1-202ENST00000380276 DNAJC10Q8IXB1 793 aa31.35■■■□□ 2.61
U2AF1-202ENST00000380276 SLC52A2Q9HAB3 445 aa31.35■■■□□ 2.61
U2AF1-202ENST00000380276 KIF7Q2M1P5 1343 aa31.34■■■□□ 2.61
U2AF1-202ENST00000380276 LGR6Q9HBX8 967 aa31.34■■■□□ 2.61
U2AF1-202ENST00000380276 ZPR1O75312 459 aa31.32■■■□□ 2.6
U2AF1-202ENST00000380276 DDR1Q08345 913 aa31.32■■■□□ 2.6
U2AF1-202ENST00000380276 SLC39A6Q13433 755 aa31.32■■■□□ 2.6
U2AF1-202ENST00000380276 CNGB1Q14028 1251 aaPredicted RBP31.32■■■□□ 2.6
U2AF1-202ENST00000380276 CC2D1BQ5T0F9 858 aaKnown RBP31.32■■■□□ 2.6
U2AF1-202ENST00000380276 INTS5Q6P9B9 1019 aaKnown RBP31.32■■■□□ 2.6
U2AF1-202ENST00000380276 PIM2Q9P1W9 311 aa31.32■■■□□ 2.6
U2AF1-202ENST00000380276 RNMTO43148 476 aaKnown RBP31.31■■■□□ 2.6
U2AF1-202ENST00000380276 BRCA1P38398 1863 aaKnown RBP31.31■■■□□ 2.6
U2AF1-202ENST00000380276 USPL1Q5W0Q7 1092 aa31.3■■■□□ 2.6
U2AF1-202ENST00000380276 DIAPH1O60610 1272 aaKnown RBP31.28■■■□□ 2.6
U2AF1-202ENST00000380276 KCNA3P22001 575 aa31.28■■■□□ 2.6
U2AF1-202ENST00000380276 DALRD3Q5D0E6 543 aaKnown RBP31.28■■■□□ 2.6
U2AF1-202ENST00000380276 VIRMAQ69YN4 1812 aaKnown RBP31.28■■■□□ 2.6
U2AF1-202ENST00000380276 CHRNA5P30532 468 aa31.27■■■□□ 2.6
U2AF1-202ENST00000380276 C9orf131Q5VYM1 1079 aa31.27■■■□□ 2.6
U2AF1-202ENST00000380276 MTHFSDQ2M296 383 aaKnown RBP31.26■■■□□ 2.59
U2AF1-202ENST00000380276 MRC1P22897 1456 aa31.26■■■□□ 2.59
U2AF1-202ENST00000380276 ARFGEF1Q9Y6D6 1849 aa31.26■■■□□ 2.59
U2AF1-202ENST00000380276 POLRMTO00411 1230 aaKnown RBP31.25■■■□□ 2.59
U2AF1-202ENST00000380276 SOS1Q07889 1333 aaPredicted RBP31.24■■■□□ 2.59
U2AF1-202ENST00000380276 CYP19A1P11511 503 aaPredicted RBP31.24■■■□□ 2.59
U2AF1-202ENST00000380276 NMRK2Q9NPI5 230 aa31.24■■■□□ 2.59
U2AF1-202ENST00000380276 CEP350Q5VT06 3117 aa31.23■■■□□ 2.59
U2AF1-202ENST00000380276 ADAMTS7Q9UKP4 1686 aa31.22■■■□□ 2.59
U2AF1-202ENST00000380276 COL15A1P39059 1388 aa31.22■■■□□ 2.59
U2AF1-202ENST00000380276 TM4SF1P30408 202 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms