RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 U2AF1L5P0DN76 240 aaPredicted RBP9.99□□□□□ -0.81
CDKL5-202ENST00000379996 U2AF1Q01081 240 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDKL5-202ENST00000379996 GOLGA2Q08379 1002 aa9.99□□□□□ -0.81
CDKL5-202ENST00000379996 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
CDKL5-202ENST00000379996 SKAP1Q86WV1 359 aa9.99□□□□□ -0.81
CDKL5-202ENST00000379996 SPDYE1Q8NFV5 336 aaPredicted RBP9.99□□□□□ -0.81
CDKL5-202ENST00000379996 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
CDKL5-202ENST00000379996 PAPPAQ13219 1627 aa9.99□□□□□ -0.81
CDKL5-202ENST00000379996 MEGF6O75095 1541 aa9.98□□□□□ -0.81
CDKL5-202ENST00000379996 PPM1GO15355 546 aaPredicted RBP9.98□□□□□ -0.81
CDKL5-202ENST00000379996 C8orf34Q49A92 452 aa9.98□□□□□ -0.81
CDKL5-202ENST00000379996 GLI3P10071 1580 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 KDM3BQ7LBC6 1761 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 AMOTQ4VCS5 1084 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 CDCA7Q9BWT1 371 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-202ENST00000379996 IL16Q14005 1332 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 SULT6B1Q6IMI4 303 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 MFRPQ9BY79 579 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 BCL11AQ9H165 835 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 CICQ96RK0 1608 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-202ENST00000379996 U2SURPO15042 1029 aaKnown RBP9.97□□□□□ -0.81
CDKL5-202ENST00000379996 SOX12O15370 315 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 PRKAR2BP31323 418 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 VPS72Q15906 364 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 NFE2L2Q16236 605 aa9.97□□□□□ -0.81
CDKL5-202ENST00000379996 CENPQQ7L2Z9 268 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-202ENST00000379996 SPATA31A5Q5VU36 1347 aa9.96□□□□□ -0.81
CDKL5-202ENST00000379996 SPATA31A7Q8IWB4 1347 aa9.96□□□□□ -0.81
CDKL5-202ENST00000379996 BCL9O00512 1426 aa9.96□□□□□ -0.82
CDKL5-202ENST00000379996 TNS2Q63HR2 1409 aa9.96□□□□□ -0.82
CDKL5-202ENST00000379996 SPATA31A1Q5TZJ5 1347 aa9.96□□□□□ -0.82
CDKL5-202ENST00000379996 UNC5CLQ8IV45 518 aa9.96□□□□□ -0.82
CDKL5-202ENST00000379996 WDR63Q8IWG1 891 aa9.96□□□□□ -0.82
CDKL5-202ENST00000379996 GAS2L2Q8NHY3 880 aa9.96□□□□□ -0.82
CDKL5-202ENST00000379996 TMPOP42166 694 aaKnown RBP9.95□□□□□ -0.82
CDKL5-202ENST00000379996 LMOD3Q0VAK6 560 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 CHRNA2Q15822 529 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 BTG4Q9NY30 223 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 CEMIPQ8WUJ3 1361 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 MAPK8IP3Q9UPT6 1336 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 TCP11L2Q8N4U5 519 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
CDKL5-202ENST00000379996 E9PSI1 815 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 ANP32AP39687 249 aaKnown RBP9.95□□□□□ -0.82
CDKL5-202ENST00000379996 AEBP1Q8IUX7 1158 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 REM2Q8IYK8 340 aaPredicted RBP9.95□□□□□ -0.82
CDKL5-202ENST00000379996 TOGARAM1Q9Y4F4 1720 aa9.95□□□□□ -0.82
CDKL5-202ENST00000379996 ZNF831Q5JPB2 1677 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 APAF1O14727 1248 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 WWC1Q8IX03 1113 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 CCDC146Q8IYE0 955 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 IL27Q8NEV9 243 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 UBR2Q8IWV8 1755 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 MAP3K5Q99683 1374 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 BABAM1Q9NWV8 329 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 NEFMP07197 916 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 PHACTR3Q96KR7 559 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 TRIM35Q9UPQ4 493 aa9.94□□□□□ -0.82
CDKL5-202ENST00000379996 PITPNM1O00562 1244 aa9.93□□□□□ -0.82
CDKL5-202ENST00000379996 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
CDKL5-202ENST00000379996 HMOX1P09601 288 aa9.93□□□□□ -0.82
CDKL5-202ENST00000379996 PLEKHO1Q53GL0 409 aaPredicted RBP9.93□□□□□ -0.82
CDKL5-202ENST00000379996 LARP1Q6PKG0 1096 aaKnown RBP9.93□□□□□ -0.82
CDKL5-202ENST00000379996 EFCAB3Q8N7B9 438 aa9.93□□□□□ -0.82
CDKL5-202ENST00000379996 BCAR3O75815 825 aa9.92□□□□□ -0.82
CDKL5-202ENST00000379996 CALD1Q05682 793 aaKnown RBP9.92□□□□□ -0.82
CDKL5-202ENST00000379996 AKAP4Q5JQC9 854 aa9.92□□□□□ -0.82
CDKL5-202ENST00000379996 IL2RBP14784 551 aa9.92□□□□□ -0.82
CDKL5-202ENST00000379996 TATP17735 454 aaPredicted RBP9.92□□□□□ -0.82
CDKL5-202ENST00000379996 MTHFSDQ2M296 383 aaKnown RBP9.92□□□□□ -0.82
CDKL5-202ENST00000379996 TOM1L2Q6ZVM7 507 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 SPG7Q9UQ90 795 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 PCDH11XQ9BZA7 1347 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 PCDH11YQ9BZA8 1340 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 EVA1CP58658 441 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 PDE3AQ14432 1141 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 NHSQ6T4R5 1651 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 ZNF853P0CG23 659 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 NLRP2Q9NX02 1062 aa9.91□□□□□ -0.82
CDKL5-202ENST00000379996 ITGB4P16144 1822 aa9.9□□□□□ -0.82
CDKL5-202ENST00000379996 CSB-PGBD3P0DP91 1061 aa9.9□□□□□ -0.82
CDKL5-202ENST00000379996 DEKP35659 375 aaKnown RBP9.9□□□□□ -0.82
CDKL5-202ENST00000379996 RAPGEF4Q8WZA2 1011 aa9.9□□□□□ -0.82
CDKL5-202ENST00000379996 LTV1Q96GA3 475 aaPredicted RBP9.9□□□□□ -0.82
CDKL5-202ENST00000379996 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.82
CDKL5-202ENST00000379996 ADAMTS2O95450 1211 aa9.9□□□□□ -0.82
CDKL5-202ENST00000379996 IGHDP01880 384 aa9.9□□□□□ -0.82
CDKL5-202ENST00000379996 DOT1LQ8TEK3 1739 aa9.9□□□□□ -0.83
CDKL5-202ENST00000379996 GNAT3A8MTJ3 354 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 HSP90AB1P08238 724 aaKnown RBP9.89□□□□□ -0.83
CDKL5-202ENST00000379996 RIPK4P57078 832 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 ERICH6Q7L0X2 663 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 LAMB4A4D0S4 1761 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 NUTM2BA6NNL0 878 aaPredicted RBP9.89□□□□□ -0.83
CDKL5-202ENST00000379996 NUTM2EB1AL46 878 aaPredicted RBP9.89□□□□□ -0.83
CDKL5-202ENST00000379996 RBM26Q5T8P6 1007 aaKnown RBP9.89□□□□□ -0.83
CDKL5-202ENST00000379996 NUTM2AQ8IVF1 878 aaPredicted RBP9.89□□□□□ -0.83
CDKL5-202ENST00000379996 USP21Q9UK80 565 aa9.89□□□□□ -0.83
CDKL5-202ENST00000379996 AFF2P51816 1311 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms